BLASTX nr result

ID: Scutellaria23_contig00027274 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00027274
         (614 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002523370.1| pentatricopeptide repeat-containing protein,...   105   6e-21
ref|XP_002320192.1| predicted protein [Populus trichocarpa] gi|2...   105   6e-21
ref|XP_003548424.1| PREDICTED: pentatricopeptide repeat-containi...   103   2e-20
ref|XP_003529895.1| PREDICTED: pentatricopeptide repeat-containi...   101   9e-20
ref|XP_002276948.1| PREDICTED: pentatricopeptide repeat-containi...    96   7e-18

>ref|XP_002523370.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223537458|gb|EEF39086.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 695

 Score =  105 bits (262), Expect = 6e-21
 Identities = 50/96 (52%), Positives = 69/96 (71%)
 Frame = +2

Query: 317 ARHAQIMKMPRKRNSDLNMQTLITSYLRFRDFQSAAMVFFVGFEQNYLYWNTFLEDFMDF 496
           A HAQ++K     NSD N +TLITSYL   DF+S+AMVFFVGF +NY+ W++F+E+F + 
Sbjct: 83  AMHAQLIKTCSMWNSDSNARTLITSYLELGDFRSSAMVFFVGFARNYVMWSSFMEEFENC 142

Query: 497 GGDPCEIPQAFAGLHNKGVTFGSETMAVVLKLSAKL 604
           GGDP ++   F  LH+KGVTF S  + VVLK+  ++
Sbjct: 143 GGDPIQVLNVFKELHSKGVTFDSGMVTVVLKICIRV 178


>ref|XP_002320192.1| predicted protein [Populus trichocarpa] gi|222860965|gb|EEE98507.1|
           predicted protein [Populus trichocarpa]
          Length = 398

 Score =  105 bits (262), Expect = 6e-21
 Identities = 52/95 (54%), Positives = 66/95 (69%)
 Frame = +2

Query: 314 KARHAQIMKMPRKRNSDLNMQTLITSYLRFRDFQSAAMVFFVGFEQNYLYWNTFLEDFMD 493
           KA HAQ++K   K NSD   + LITSYL   D +SAA+VFFVGF +NY+ WN FLE+F  
Sbjct: 69  KAMHAQMIKKGNKWNSDSMAKHLITSYLELGDCKSAAVVFFVGFARNYVMWNNFLEEFKS 128

Query: 494 FGGDPCEIPQAFAGLHNKGVTFGSETMAVVLKLSA 598
           FGGDP E+ + F  LH +GV F S  ++VVLK+ A
Sbjct: 129 FGGDPSEVLEVFKELHCEGVVFDSRVISVVLKICA 163


>ref|XP_003548424.1| PREDICTED: pentatricopeptide repeat-containing protein At4g01030,
           mitochondrial-like [Glycine max]
          Length = 911

 Score =  103 bits (258), Expect = 2e-20
 Identities = 50/94 (53%), Positives = 66/94 (70%)
 Frame = +2

Query: 323 HAQIMKMPRKRNSDLNMQTLITSYLRFRDFQSAAMVFFVGFEQNYLYWNTFLEDFMDFGG 502
           HAQI+KMP+KRN      +++ +YL+F DF+SA  VFFVGF +NYL WN+F+E+F  FGG
Sbjct: 51  HAQIIKMPKKRNLVTMDGSMMRNYLQFGDFESATKVFFVGFARNYLLWNSFIEEFASFGG 110

Query: 503 DPCEIPQAFAGLHNKGVTFGSETMAVVLKLSAKL 604
           D  EI   F  LH+KGV F S+ + VVLK+   L
Sbjct: 111 DSHEILAVFKELHDKGVKFDSKALTVVLKICLAL 144


>ref|XP_003529895.1| PREDICTED: pentatricopeptide repeat-containing protein At4g01030,
           mitochondrial-like [Glycine max]
          Length = 911

 Score =  101 bits (252), Expect = 9e-20
 Identities = 49/94 (52%), Positives = 65/94 (69%)
 Frame = +2

Query: 323 HAQIMKMPRKRNSDLNMQTLITSYLRFRDFQSAAMVFFVGFEQNYLYWNTFLEDFMDFGG 502
           HAQ++KMP+K N      +++ +YL F DF+SA  VFFVGF +NYL WN+FLE+F  FGG
Sbjct: 51  HAQMIKMPKKGNLVTMDGSMMRNYLEFGDFESATKVFFVGFARNYLLWNSFLEEFASFGG 110

Query: 503 DPCEIPQAFAGLHNKGVTFGSETMAVVLKLSAKL 604
           D  EI + F  LH+KGV F S+ + VVLK+   L
Sbjct: 111 DSHEILEVFKELHDKGVKFDSKALTVVLKICLAL 144


>ref|XP_002276948.1| PREDICTED: pentatricopeptide repeat-containing protein At4g01030,
           mitochondrial-like [Vitis vinifera]
          Length = 913

 Score = 95.5 bits (236), Expect = 7e-18
 Identities = 56/146 (38%), Positives = 75/146 (51%), Gaps = 3/146 (2%)
 Frame = +2

Query: 176 MEAISPLYHLNVSSQRNFT---IKFSQLDXXXXXXXXXXXXXXXXXXXXKARHAQIMKMP 346
           ME + PL+HL+   Q   T   IK                         K  HAQ++K+P
Sbjct: 1   MEKLVPLHHLHPPLQNPLTHKPIKTPTSKLYLDSHSSDDSNVITSLTSVKMMHAQMIKLP 60

Query: 347 RKRNSDLNMQTLITSYLRFRDFQSAAMVFFVGFEQNYLYWNTFLEDFMDFGGDPCEIPQA 526
           +K N D   + LI+SYL F DF SAAMVF+VG  +NYL WN+F+E+F    G    + + 
Sbjct: 61  QKWNPDAAAKNLISSYLGFGDFWSAAMVFYVGLPRNYLKWNSFVEEFKSSAGSLHIVLEV 120

Query: 527 FAGLHNKGVTFGSETMAVVLKLSAKL 604
           F  LH KGV F SE  +V LK   ++
Sbjct: 121 FKELHGKGVVFDSEVYSVALKTCTRV 146


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