BLASTX nr result
ID: Scutellaria23_contig00027252
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Scutellaria23_contig00027252
(286 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|YP_007353958.1| Ycf2 protein (chloroplast) [Tectona grandis]... 169 9e-47
ref|YP_007507155.1| hypothetical chloroplast RF2 (chloroplast) [... 164 2e-45
gb|ADD30879.1| putative RF2 protein [Antirrhinum majus] gi|34080... 164 3e-45
ref|YP_004935710.1| ycf2 gene product (chloroplast) [Sesamum ind... 163 4e-45
ref|YP_003359401.1| Ycf2 (chloroplast) [Olea europaea] gi|283795... 162 9e-45
>ref|YP_007353958.1| Ycf2 protein (chloroplast) [Tectona grandis]
gi|442743025|ref|YP_007353977.1| Ycf2 protein
(chloroplast) [Tectona grandis]
gi|438687647|emb|CCP47174.1| YCF2 protein (chloroplast)
[Tectona grandis] gi|438687666|emb|CCP47196.1| ycf2
protein (chloroplast) [Tectona grandis]
gi|438688331|emb|CCP47263.1| YCF2 protein (chloroplast)
[Tectona grandis] gi|438688350|emb|CCP47285.1| ycf2
protein (chloroplast) [Tectona grandis]
gi|438688455|emb|CCP47352.1| YCF2 protein (chloroplast)
[Tectona grandis] gi|438688474|emb|CCP47374.1| ycf2
protein (chloroplast) [Tectona grandis]
Length = 2287
Score = 169 bits (427), Expect(2) = 9e-47
Identities = 76/78 (97%), Positives = 76/78 (97%)
Frame = -2
Query: 234 KKWKPFLLDDHDTSRKSKLLINGGTPLLFNKIPKWMIDSFHTRNNRRKSFDNADSYFSMI 55
KKWKPFLLDDHDTSRKSK LINGGTP LFNKIPKWMIDSFHTRNNRRKSFDNADSYFSMI
Sbjct: 931 KKWKPFLLDDHDTSRKSKFLINGGTPFLFNKIPKWMIDSFHTRNNRRKSFDNADSYFSMI 990
Query: 54 FHNQDNWLNPVKPFHRSS 1
FHNQDNWLNPVKPFHRSS
Sbjct: 991 FHNQDNWLNPVKPFHRSS 1008
Score = 43.1 bits (100), Expect(2) = 9e-47
Identities = 20/25 (80%), Positives = 22/25 (88%)
Frame = -1
Query: 286 QLCNQLLESIGLQIVHLKKMETLLI 212
QLCNQLLESIGLQIVHLKK + L+
Sbjct: 914 QLCNQLLESIGLQIVHLKKWKPFLL 938
>ref|YP_007507155.1| hypothetical chloroplast RF2 (chloroplast) [Salvia miltiorrhiza]
gi|459014556|ref|YP_007507174.1| hypothetical chloroplast
RF2 (chloroplast) [Salvia miltiorrhiza]
gi|401879785|gb|AFQ30972.1| hypothetical chloroplast RF2
(chloroplast) [Salvia miltiorrhiza]
gi|401879806|gb|AFQ30993.1| hypothetical chloroplast RF2
(chloroplast) [Salvia miltiorrhiza]
Length = 2283
Score = 164 bits (416), Expect(2) = 2e-45
Identities = 74/78 (94%), Positives = 75/78 (96%)
Frame = -2
Query: 234 KKWKPFLLDDHDTSRKSKLLINGGTPLLFNKIPKWMIDSFHTRNNRRKSFDNADSYFSMI 55
KKWKPFLLDDHDTS+K K LINGGTP LFNKIPKWMIDSFHTRNNRRKSFDNADSYFSMI
Sbjct: 929 KKWKPFLLDDHDTSQKWKFLINGGTPFLFNKIPKWMIDSFHTRNNRRKSFDNADSYFSMI 988
Query: 54 FHNQDNWLNPVKPFHRSS 1
FHNQDNWLNPVKPFHRSS
Sbjct: 989 FHNQDNWLNPVKPFHRSS 1006
Score = 43.1 bits (100), Expect(2) = 2e-45
Identities = 20/25 (80%), Positives = 22/25 (88%)
Frame = -1
Query: 286 QLCNQLLESIGLQIVHLKKMETLLI 212
QLCNQLLESIGLQIVHLKK + L+
Sbjct: 912 QLCNQLLESIGLQIVHLKKWKPFLL 936
>gb|ADD30879.1| putative RF2 protein [Antirrhinum majus] gi|340807055|gb|AEK71663.1|
hypothetical chloroplast RF2 [Antirrhinum majus]
Length = 2274
Score = 164 bits (414), Expect(2) = 3e-45
Identities = 76/80 (95%), Positives = 76/80 (95%), Gaps = 2/80 (2%)
Frame = -2
Query: 234 KKWKPFLLDDHDTSRKSKLLINGGT--PLLFNKIPKWMIDSFHTRNNRRKSFDNADSYFS 61
KKWKPFLLDDHDTSRKSK LINGGT P LFNKIPKWMIDSFHTRNNRRKSFDNADSYFS
Sbjct: 931 KKWKPFLLDDHDTSRKSKFLINGGTISPFLFNKIPKWMIDSFHTRNNRRKSFDNADSYFS 990
Query: 60 MIFHNQDNWLNPVKPFHRSS 1
MIFHNQDNWLNPVKPFHRSS
Sbjct: 991 MIFHNQDNWLNPVKPFHRSS 1010
Score = 43.1 bits (100), Expect(2) = 3e-45
Identities = 20/25 (80%), Positives = 22/25 (88%)
Frame = -1
Query: 286 QLCNQLLESIGLQIVHLKKMETLLI 212
QLCNQLLESIGLQIVHLKK + L+
Sbjct: 914 QLCNQLLESIGLQIVHLKKWKPFLL 938
>ref|YP_004935710.1| ycf2 gene product (chloroplast) [Sesamum indicum]
gi|359422324|ref|YP_004935729.1| ycf2 gene product
(chloroplast) [Sesamum indicum]
gi|347448339|gb|AEO92750.1| ycf2 (chloroplast) [Sesamum
indicum] gi|347448358|gb|AEO92769.1| ycf2 (chloroplast)
[Sesamum indicum]
Length = 2097
Score = 163 bits (413), Expect(2) = 4e-45
Identities = 75/78 (96%), Positives = 75/78 (96%)
Frame = -2
Query: 234 KKWKPFLLDDHDTSRKSKLLINGGTPLLFNKIPKWMIDSFHTRNNRRKSFDNADSYFSMI 55
KKWKPFLLDDHDTSRKSK LINGGTP LFNKIPK MIDSFHTRNNRRKSFDNADSYFSMI
Sbjct: 733 KKWKPFLLDDHDTSRKSKFLINGGTPFLFNKIPKRMIDSFHTRNNRRKSFDNADSYFSMI 792
Query: 54 FHNQDNWLNPVKPFHRSS 1
FHNQDNWLNPVKPFHRSS
Sbjct: 793 FHNQDNWLNPVKPFHRSS 810
Score = 43.1 bits (100), Expect(2) = 4e-45
Identities = 20/25 (80%), Positives = 22/25 (88%)
Frame = -1
Query: 286 QLCNQLLESIGLQIVHLKKMETLLI 212
QLCNQLLESIGLQIVHLKK + L+
Sbjct: 716 QLCNQLLESIGLQIVHLKKWKPFLL 740
>ref|YP_003359401.1| Ycf2 (chloroplast) [Olea europaea] gi|283795030|ref|YP_003359421.1|
Ycf2 (chloroplast) [Olea europaea]
gi|281428729|gb|ADA69968.1| Ycf2 (chloroplast) [Olea
europaea] gi|281428749|gb|ADA69988.1| Ycf2 (chloroplast)
[Olea europaea] gi|291059296|gb|ADD72132.1| hypothetical
chloroplast RF21 [Olea europaea]
gi|291059317|gb|ADD72153.1| hypothetical chloroplast RF21
[Olea europaea]
Length = 2277
Score = 162 bits (410), Expect(2) = 9e-45
Identities = 75/80 (93%), Positives = 75/80 (93%), Gaps = 2/80 (2%)
Frame = -2
Query: 234 KKWKPFLLDDHDTSRKSKLLINGGT--PLLFNKIPKWMIDSFHTRNNRRKSFDNADSYFS 61
KKWKPFLLDDHDTSRKSK LINGGT P LFNKIPKWMIDSFHTRNNRRKSFDN DSYFS
Sbjct: 928 KKWKPFLLDDHDTSRKSKFLINGGTISPFLFNKIPKWMIDSFHTRNNRRKSFDNTDSYFS 987
Query: 60 MIFHNQDNWLNPVKPFHRSS 1
MIFHNQDNWLNPVKPFHRSS
Sbjct: 988 MIFHNQDNWLNPVKPFHRSS 1007
Score = 43.1 bits (100), Expect(2) = 9e-45
Identities = 20/25 (80%), Positives = 22/25 (88%)
Frame = -1
Query: 286 QLCNQLLESIGLQIVHLKKMETLLI 212
QLCNQLLESIGLQIVHLKK + L+
Sbjct: 911 QLCNQLLESIGLQIVHLKKWKPFLL 935