BLASTX nr result

ID: Scutellaria23_contig00027234 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00027234
         (794 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002533653.1| transcription factor, putative [Ricinus comm...   138   2e-30
ref|XP_002327777.1| short internodes 2 [Populus trichocarpa] gi|...   135   8e-30
ref|XP_002267550.1| PREDICTED: uncharacterized protein LOC100250...   127   4e-27
ref|XP_002310281.1| short internodes 1 [Populus trichocarpa] gi|...   126   5e-27
ref|XP_003548866.1| PREDICTED: uncharacterized protein LOC100781...   120   3e-25

>ref|XP_002533653.1| transcription factor, putative [Ricinus communis]
           gi|223526448|gb|EEF28724.1| transcription factor,
           putative [Ricinus communis]
          Length = 350

 Score =  138 bits (347), Expect = 2e-30
 Identities = 73/130 (56%), Positives = 85/130 (65%), Gaps = 5/130 (3%)
 Frame = -1

Query: 377 DQESTSHXXXXXXXXXXXSWFRFRNEDISYKGFELWQPGAQHQQAENFLHLGGVGPLQDL 198
           DQ+  ++           SWF ++NED+ YKGFELWQ   Q QQ E F H       QDL
Sbjct: 20  DQQHNNNPPPPPTEIPQESWFWYKNEDVPYKGFELWQQ-QQQQQQEFFRHQSLQQQQQDL 78

Query: 197 YASE----VGPSRGSGLSISDDQSQRSGFLMFRSSGGGG-ISCQDCGNQAKKDCVHMRCR 33
           Y+S     VGPSR S ++ SD+ S RS F+M RSS GG  +SCQDCGNQAKKDCVHMRCR
Sbjct: 79  YSSAAGLGVGPSRSS-INFSDESSSRSAFMMMRSSSGGSSMSCQDCGNQAKKDCVHMRCR 137

Query: 32  TCCKSRGFQC 3
           TCCKSRGF C
Sbjct: 138 TCCKSRGFDC 147


>ref|XP_002327777.1| short internodes 2 [Populus trichocarpa]
           gi|222836862|gb|EEE75255.1| short internodes 2 [Populus
           trichocarpa]
          Length = 344

 Score =  135 bits (341), Expect = 8e-30
 Identities = 73/139 (52%), Positives = 88/139 (63%), Gaps = 11/139 (7%)
 Frame = -1

Query: 386 SNPDQESTSHXXXXXXXXXXXSWFRFRNEDISYKGFELWQPGAQHQQAENFLHLGGVGPL 207
           +N +Q+  ++           +WF +R+ED SYKGFELWQ   QH   +  LH     P 
Sbjct: 16  NNQEQQQNNNNSNPPNEIPQENWFCYRSEDNSYKGFELWQ---QHHHHQELLHQRHQNPQ 72

Query: 206 QDLYASEVG----PSRGSGLSISDDQSQRSG----FLMFRSSG---GGGISCQDCGNQAK 60
           QDLY+S VG    PSR S ++ISD+ S RS     F+M R  G   GG ISCQDCGNQAK
Sbjct: 73  QDLYSSAVGLGVGPSRAS-INISDESSSRSAAAAAFMMMRPVGSGVGGSISCQDCGNQAK 131

Query: 59  KDCVHMRCRTCCKSRGFQC 3
           KDCVHMRCRTCCKSRGF+C
Sbjct: 132 KDCVHMRCRTCCKSRGFEC 150


>ref|XP_002267550.1| PREDICTED: uncharacterized protein LOC100250664 [Vitis vinifera]
          Length = 344

 Score =  127 bits (318), Expect = 4e-27
 Identities = 70/121 (57%), Positives = 76/121 (62%), Gaps = 16/121 (13%)
 Frame = -1

Query: 317 FRFRNEDISYKGFELWQPGAQHQQAENFLHLGGVGPLQDLYASEVGPSRGSGLSISD--- 147
           F +RNEDISYKGFELWQ   Q Q  +   H       QDLY+S  GPS G G S S    
Sbjct: 29  FFYRNEDISYKGFELWQHQPQEQLHQRHQHHP-----QDLYSS--GPSLGVGSSRSSINL 81

Query: 146 -DQSQRSGFLMFRSS------------GGGGISCQDCGNQAKKDCVHMRCRTCCKSRGFQ 6
            D S RS FLM R +            GGGG+SCQDCGNQAKKDC+HMRCRTCCKSRGFQ
Sbjct: 82  SDDSSRSAFLMMRQAAGGGGAGAGGGGGGGGMSCQDCGNQAKKDCIHMRCRTCCKSRGFQ 141

Query: 5   C 3
           C
Sbjct: 142 C 142


>ref|XP_002310281.1| short internodes 1 [Populus trichocarpa]
           gi|222853184|gb|EEE90731.1| short internodes 1 [Populus
           trichocarpa]
          Length = 229

 Score =  126 bits (317), Expect = 5e-27
 Identities = 71/143 (49%), Positives = 86/143 (60%), Gaps = 14/143 (9%)
 Frame = -1

Query: 389 SSNPDQESTSHXXXXXXXXXXXSWFRFRNEDISYKGFELWQPGAQHQQAENFLHLGGVGP 210
           SS+ +QE   +           SWF +++EDI YK FELWQ     QQ +  LH     P
Sbjct: 12  SSSNNQEDQQNNNNPPTEIPQESWFWYKSEDIPYKSFELWQ-----QQHQELLHQRHQNP 66

Query: 209 LQDLYASEVG----PSRGSGLSISDDQSQRSG-----FLMFR-----SSGGGGISCQDCG 72
            QDLY+  VG    PSR S ++ISD+ S RS      F+M R     + G G ISCQDCG
Sbjct: 67  QQDLYSPAVGLGVGPSRTS-INISDESSSRSAAAAEAFMMMRPGGSGTGGAGSISCQDCG 125

Query: 71  NQAKKDCVHMRCRTCCKSRGFQC 3
           NQAKKDC+HMRCRTCCKSRGF+C
Sbjct: 126 NQAKKDCIHMRCRTCCKSRGFEC 148


>ref|XP_003548866.1| PREDICTED: uncharacterized protein LOC100781981 [Glycine max]
          Length = 361

 Score =  120 bits (301), Expect = 3e-25
 Identities = 62/131 (47%), Positives = 83/131 (63%), Gaps = 6/131 (4%)
 Frame = -1

Query: 377 DQESTSHXXXXXXXXXXXSWFRFRNEDIS--YKGFELWQPGAQHQQAENFLHLGGVGPL- 207
           +QE  ++            W+  +N+D+S  ++GFELW    +HQ   + +H     PL 
Sbjct: 60  NQEENNNQSSEIPPAETLFWYS-KNDDVSSYHRGFELWNQHQEHQHHHHAMHHPHARPLL 118

Query: 206 -QDLYASEVGPSRGSGLSISDDQSQRSGFLMFRSSG--GGGISCQDCGNQAKKDCVHMRC 36
            +DLY+S VGPSRG G+S     S+ + F+  R++G  GGGISCQDCGNQAKKDC HMRC
Sbjct: 119 QRDLYSSGVGPSRG-GISDDHSSSRSAAFVAMRAAGAEGGGISCQDCGNQAKKDCPHMRC 177

Query: 35  RTCCKSRGFQC 3
           RTCCKSRG+ C
Sbjct: 178 RTCCKSRGYDC 188


Top