BLASTX nr result

ID: Scutellaria23_contig00027009 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00027009
         (659 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI22241.3| unnamed protein product [Vitis vinifera]              176   5e-42
ref|XP_002278558.1| PREDICTED: pentatricopeptide repeat-containi...   176   5e-42
ref|XP_002533116.1| pentatricopeptide repeat-containing protein,...   160   2e-37
ref|XP_003553062.1| PREDICTED: pentatricopeptide repeat-containi...   146   4e-33
ref|XP_002323869.1| predicted protein [Populus trichocarpa] gi|2...   117   2e-24

>emb|CBI22241.3| unnamed protein product [Vitis vinifera]
          Length = 1256

 Score =  176 bits (445), Expect = 5e-42
 Identities = 94/220 (42%), Positives = 137/220 (62%), Gaps = 1/220 (0%)
 Frame = -3

Query: 657  IFDGMVRRGYTIDNDTYSALLFDICKKGDLGSLHCYLKLACKSNWSPDVSDGKALLRYMC 478
            I +GM++R  ++ ++TY ALL  +CKKG+  ++ C   LA +  W  ++ D K L+  +C
Sbjct: 641  ILNGMLQRHLSVKSETYVALLAGLCKKGNSRTIRCCWDLARRDKWLLELKDCKVLVGCLC 700

Query: 477  RNKWFDEALELFETMYYVRSCDIMDTFHSLLEELCCQGFTSTTCVFLDEISKQATISDHI 298
            + K+  EALEL E+M        +D  +  LE+LC  GFT+     +DE  +Q  I DH 
Sbjct: 701  QQKFLKEALELLESMLATYPHLRLDVCNMFLEKLCVVGFTTIAHALVDEFLQQGCILDHT 760

Query: 297  AYSHILSGFCQEKRFLEASKVFGTMLTQNLSPPLRVSIQLISQLCRIN-YEKAIELKNIY 121
            A+SH++SGFC+EKRF EA  +F +M  +NL P L  SI LI QLCR N  EKAI LK++ 
Sbjct: 761  AHSHLISGFCKEKRFSEAFTIFESMQAKNLVPCLDASILLIPQLCRANRVEKAIALKDLS 820

Query: 120  LMDQPYSQLLINCALINGLSKSGRIGEATSLFKEVWLKGL 1
            L +Q      ++ AL+NG  K+GRIGEA  LF++++  GL
Sbjct: 821  LREQSIDSFSVHSALMNGFCKTGRIGEAAILFQDMFSNGL 860


>ref|XP_002278558.1| PREDICTED: pentatricopeptide repeat-containing protein At5g15280-like
            [Vitis vinifera]
          Length = 1273

 Score =  176 bits (445), Expect = 5e-42
 Identities = 94/220 (42%), Positives = 137/220 (62%), Gaps = 1/220 (0%)
 Frame = -3

Query: 657  IFDGMVRRGYTIDNDTYSALLFDICKKGDLGSLHCYLKLACKSNWSPDVSDGKALLRYMC 478
            I +GM++R  ++ ++TY ALL  +CKKG+  ++ C   LA +  W  ++ D K L+  +C
Sbjct: 658  ILNGMLQRHLSVKSETYVALLAGLCKKGNSRTIRCCWDLARRDKWLLELKDCKVLVGCLC 717

Query: 477  RNKWFDEALELFETMYYVRSCDIMDTFHSLLEELCCQGFTSTTCVFLDEISKQATISDHI 298
            + K+  EALEL E+M        +D  +  LE+LC  GFT+     +DE  +Q  I DH 
Sbjct: 718  QQKFLKEALELLESMLATYPHLRLDVCNMFLEKLCVVGFTTIAHALVDEFLQQGCILDHT 777

Query: 297  AYSHILSGFCQEKRFLEASKVFGTMLTQNLSPPLRVSIQLISQLCRIN-YEKAIELKNIY 121
            A+SH++SGFC+EKRF EA  +F +M  +NL P L  SI LI QLCR N  EKAI LK++ 
Sbjct: 778  AHSHLISGFCKEKRFSEAFTIFESMQAKNLVPCLDASILLIPQLCRANRVEKAIALKDLS 837

Query: 120  LMDQPYSQLLINCALINGLSKSGRIGEATSLFKEVWLKGL 1
            L +Q      ++ AL+NG  K+GRIGEA  LF++++  GL
Sbjct: 838  LREQSIDSFSVHSALMNGFCKTGRIGEAAILFQDMFSNGL 877


>ref|XP_002533116.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223527079|gb|EEF29261.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 1204

 Score =  160 bits (406), Expect = 2e-37
 Identities = 84/220 (38%), Positives = 136/220 (61%), Gaps = 1/220 (0%)
 Frame = -3

Query: 657  IFDGMVRRGYTIDNDTYSALLFDICKKGDLGSLHCYLKLACKSNWSPDVSDGKALLRYMC 478
            IF  M+ +   I+N TY+AL+  +CK+GDL ++     +A  S W P++ D K+L+  +C
Sbjct: 579  IFHQMLLKDVIIENGTYTALIVGLCKRGDLQAVRDCWDIAQNSKWLPELKDCKSLVGCLC 638

Query: 477  RNKWFDEALELFETMYYVRSCDIMDTFHSLLEELCCQGFTSTTCVFLDEISKQATISDHI 298
             ++     +EL E+M         + FH  LEEL   GFTS     +DE+ +Q  + D++
Sbjct: 639  YHRMVKGVIELLESMMVFYPHLRAEIFHMFLEELSITGFTSIAHKLVDELLQQGCVFDNV 698

Query: 297  AYSHILSGFCQEKRFLEASKVFGTMLTQNLSPPLRVSIQLISQLCRIN-YEKAIELKNIY 121
             YS++L G C+E++++ AS + G +L +NL P L VS+ LI QLC+ +  + AI L++I 
Sbjct: 699  VYSYLLRGLCKERKYIAASTMAGEVLARNLVPCLDVSVILIPQLCKADRLDIAIALRDIS 758

Query: 120  LMDQPYSQLLINCALINGLSKSGRIGEATSLFKEVWLKGL 1
            L +Q  SQL ++CAL+ G  K+G+IGEA ++ + + LKGL
Sbjct: 759  LREQSVSQLSVDCALVKGFCKTGKIGEAANMLQNMLLKGL 798



 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 47/220 (21%), Positives = 90/220 (40%), Gaps = 1/220 (0%)
 Frame = -3

Query: 657  IFDGMVRRGYTIDNDTYSALLFDICKKGDLGSLHCYLKLACKSNWSPDVSDGKALLRYMC 478
            + D ++++G   DN  YS LL  +CK+    +           N  P +     L+  +C
Sbjct: 684  LVDELLQQGCVFDNVVYSYLLRGLCKERKYIAASTMAGEVLARNLVPCLDVSVILIPQLC 743

Query: 477  RNKWFDEALELFETMYYVRSCDIMDTFHSLLEELCCQGFTSTTCVFLDEISKQATISDHI 298
            +    D A+ L +     +S   +    +L++  C  G        L  +  +  + D  
Sbjct: 744  KADRLDIAIALRDISLREQSVSQLSVDCALVKGFCKTGKIGEAANMLQNMLLKGLLPDAE 803

Query: 297  AYSHILSGFCQEKRFLEASKVFGTMLTQNLSPPLRVSIQLISQLC-RINYEKAIELKNIY 121
             Y+ +  G+CQ   + +  ++   ++ + LSP +     L   +C   ++  A+ LK + 
Sbjct: 804  IYNMLFQGYCQANNWKKVRELLSVLIRKFLSPSVSSYQNLARLMCMHGSFTSALSLKVLM 863

Query: 120  LMDQPYSQLLINCALINGLSKSGRIGEATSLFKEVWLKGL 1
            L +  Y  L+I   LI  L  +G       +  E+  KGL
Sbjct: 864  LENSRYDSLVIYNILIFHLLSAGNCLHVVRVLDELQEKGL 903


>ref|XP_003553062.1| PREDICTED: pentatricopeptide repeat-containing protein At5g15280-like
            [Glycine max]
          Length = 1186

 Score =  146 bits (368), Expect = 4e-33
 Identities = 82/220 (37%), Positives = 121/220 (55%), Gaps = 1/220 (0%)
 Frame = -3

Query: 657  IFDGMVRRGYTIDNDTYSALLFDICKKGDLGSLHCYLKLACKSNWSPDVSDGKALLRYMC 478
            I DGM++  + + N+TY+A+L  +CKKG++     Y  +AC++ W P + D K LL ++C
Sbjct: 575  ILDGMLQNEFHVKNETYTAILMPLCKKGNMKDFSYYWDVACRNKWLPSLEDFKCLLVHIC 634

Query: 477  RNKWFDEALELFETMYYVRSCDIMDTFHSLLEELCCQGFTSTTCVFLDEISKQATISDHI 298
              K   EA +  E M         D  H  LE L   G   T  V L ++     + DH 
Sbjct: 635  HWKMLKEASQFLEIMLLSYPYLKSDICHVFLEVLSSTGLADTALVVLKQLQPCFNL-DHT 693

Query: 297  AYSHILSGFCQEKRFLEASKVFGTMLTQNLSPPLRVSIQLISQLCRIN-YEKAIELKNIY 121
             Y+H++ G C E +F  A  V   ML ++L+P L VS+ LI QLC+ + Y+KAI LK+I 
Sbjct: 694  DYNHLIRGLCNEGKFSLAFTVLDDMLDRSLAPCLDVSVLLIPQLCKAHRYDKAIALKDII 753

Query: 120  LMDQPYSQLLINCALINGLSKSGRIGEATSLFKEVWLKGL 1
            L +QP      +CALI G    G  G+A +LF+++  KGL
Sbjct: 754  LKEQPSFSHAADCALICGFCNMGSTGKADTLFRDMLSKGL 793



 Score = 59.7 bits (143), Expect = 5e-07
 Identities = 43/176 (24%), Positives = 83/176 (47%), Gaps = 1/176 (0%)
 Frame = -3

Query: 657  IFDGMVRRGYTIDNDTYSALLFDICKKGDLGSLHCYLKLACKSNWSPDVSDGKALLRYMC 478
            +F  M+ +G T D++  + ++   C   DL  +   L  A + +W   ++  K L+R +C
Sbjct: 784  LFRDMLSKGLTPDDELCNIIIQGHCHVNDLRKVGELLGFAIRKDWELSLTSYKNLVRLVC 843

Query: 477  RNKWFDEALELFETMYYVRSCDIMDTFHSLLEELCCQGFTSTTCVFLDEISKQATISDHI 298
            R      AL L   M      D +  ++ L+  L   G +      L E+ ++  + D +
Sbjct: 844  RKGRVQFALSLKNLMLAQCPLDGLIIYNILMFYLLKDGNSLDVNKILTEMEEKKVVLDEV 903

Query: 297  AYSHILSGFCQEKRFLEASKVFGTMLTQNLSPPLRVSIQLISQLCRI-NYEKAIEL 133
             ++ ++ GF Q +    +     TM+++ L P  R   ++IS+LC   N +KA++L
Sbjct: 904  GHNFLVYGFLQCRDLSSSLHYLTTMISKGLKPSNRSLRKVISKLCDAGNLKKALKL 959


>ref|XP_002323869.1| predicted protein [Populus trichocarpa] gi|222866871|gb|EEF04002.1|
            predicted protein [Populus trichocarpa]
          Length = 1158

 Score =  117 bits (293), Expect = 2e-24
 Identities = 70/220 (31%), Positives = 116/220 (52%), Gaps = 1/220 (0%)
 Frame = -3

Query: 657  IFDGMVRRGYTIDNDTYSALLFDICKKGDLGSLHCYLKLACKSNWSPDVSDGKALLRYMC 478
            IF+ M++R  TI+++T++AL+  +CKK +L +LH     A    W P + D  +++  +C
Sbjct: 543  IFNQMLQRNLTINSETFTALIKGLCKKENLRNLHDCWDFALNGKWLPGLVDCISVVECLC 602

Query: 477  RNKWFDEALELFETMYYVRSCDIMDTFHSLLEELCCQGFTSTTCVFLDEISKQATISDHI 298
                  E LEL E M  +     +   H  LE+L   GF+S   +F++E+ +     D I
Sbjct: 603  HCGMLKEVLELLERMLVLNPESRLKVLHIFLEKLSLTGFSSIAHLFVEELLQHGCALDQI 662

Query: 297  AYSHILSGFCQEKRFLEASKVFGTMLTQNLSPPLRVSIQLISQLCRIN-YEKAIELKNIY 121
            AYSH++ G C+E+++  A  V   ML + + P L VS+ LI QLC+ +  + AIEL    
Sbjct: 663  AYSHLIKGLCKEQKYKVAFAVLDIMLARKMVPCLDVSLILIPQLCKADKLQTAIELMENV 722

Query: 120  LMDQPYSQLLINCALINGLSKSGRIGEATSLFKEVWLKGL 1
            L      +   +         +G+ GEA ++F+ +  KGL
Sbjct: 723  LR----VRTTFHSDFTKRFCVTGKAGEAANIFQNMLSKGL 758


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