BLASTX nr result

ID: Scutellaria23_contig00026979 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00026979
         (421 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282063.1| PREDICTED: pentatricopeptide repeat-containi...   106   2e-21
ref|XP_003525932.1| PREDICTED: pentatricopeptide repeat-containi...    95   7e-18
ref|XP_004152427.1| PREDICTED: pentatricopeptide repeat-containi...    91   1e-16
ref|XP_004170773.1| PREDICTED: pentatricopeptide repeat-containi...    87   1e-15
ref|XP_002526196.1| pentatricopeptide repeat-containing protein,...    79   3e-13

>ref|XP_002282063.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g66520-like [Vitis vinifera]
          Length = 533

 Score =  106 bits (264), Expect = 2e-21
 Identities = 54/113 (47%), Positives = 74/113 (65%)
 Frame = +2

Query: 80  MIERAIEFKLPAKTKLINQRCETLNQLKQIHAYLVKNPFFRTSAAVTSVLSFAATSADPG 259
           MI++A+          + ++C  L+QLKQIHA L+++    +  A+  +LS AATS +P 
Sbjct: 1   MIQKAVINYRSNTLNSLLKKCRALSQLKQIHANLLQSHLPESPFAIGQLLSLAATSNNPS 60

Query: 260 FFSYACALFHNLRRRTTFLYNSMIRGFVKSNQPIDAILCYKDMLRDGLIKNNY 418
           FFS+AC +F NL  R  F+YNSMIRG+V S+ P  AILCY DML  GL+ NNY
Sbjct: 61  FFSHACLIFQNLSLRNIFMYNSMIRGYVLSHSPTRAILCYLDMLNYGLLANNY 113


>ref|XP_003525932.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g66520-like [Glycine max]
          Length = 526

 Score = 94.7 bits (234), Expect = 7e-18
 Identities = 43/97 (44%), Positives = 66/97 (68%)
 Frame = +2

Query: 128 INQRCETLNQLKQIHAYLVKNPFFRTSAAVTSVLSFAATSADPGFFSYACALFHNLRRRT 307
           + Q+C TL QLKQ+HA++++     T  A+  +LS  ATS D  FFSYA ++F +L  R 
Sbjct: 11  VAQKCNTLTQLKQLHAHILRCRINDTPYALAPLLSVLATSNDASFFSYARSIFRHLTNRN 70

Query: 308 TFLYNSMIRGFVKSNQPIDAILCYKDMLRDGLIKNNY 418
           TF++N+MIRG+++   P+ A+ CY  ML++G+  NNY
Sbjct: 71  TFMHNTMIRGYLQCRSPLHAVSCYLSMLQNGVAVNNY 107


>ref|XP_004152427.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g66520-like [Cucumis sativus]
          Length = 528

 Score = 90.5 bits (223), Expect = 1e-16
 Identities = 44/97 (45%), Positives = 63/97 (64%), Gaps = 2/97 (2%)
 Frame = +2

Query: 134 QRCETLNQLKQIHAYLVKNPFFRTSAAVTSVLSFAATSA--DPGFFSYACALFHNLRRRT 307
           ++C+++  LKQIHA+L+K    ++  A+  +L  AATS      FFSYAC +F NL++R 
Sbjct: 15  RKCKSVQHLKQIHAHLLKTYLSQSPYAIAPLLEVAATSGCDRDSFFSYACGIFKNLQQRN 74

Query: 308 TFLYNSMIRGFVKSNQPIDAILCYKDMLRDGLIKNNY 418
            F+YNSMIRG+  S  P  AILCY D++  G + N Y
Sbjct: 75  IFMYNSMIRGYFLSRFPKQAILCYLDLMDRGFLANKY 111


>ref|XP_004170773.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g66520-like [Cucumis sativus]
          Length = 487

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 43/97 (44%), Positives = 62/97 (63%), Gaps = 2/97 (2%)
 Frame = +2

Query: 134 QRCETLNQLKQIHAYLVKNPFFRTSAAVTSVLSFAATSA--DPGFFSYACALFHNLRRRT 307
           ++C+++  LKQIHA+L+     ++  A+  +L  AATS      FFSYAC +F NL++R 
Sbjct: 15  RKCKSVQHLKQIHAHLLMTYLPQSPYAIAPLLEVAATSGCDRDSFFSYACGIFKNLQQRN 74

Query: 308 TFLYNSMIRGFVKSNQPIDAILCYKDMLRDGLIKNNY 418
            F+YNSMIRG+  S  P  AILCY D++  G + N Y
Sbjct: 75  IFMYNSMIRGYFLSRFPKQAILCYLDLMDRGFLANKY 111


>ref|XP_002526196.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223534500|gb|EEF36200.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 491

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 38/105 (36%), Positives = 62/105 (59%)
 Frame = +2

Query: 104 KLPAKTKLINQRCETLNQLKQIHAYLVKNPFFRTSAAVTSVLSFAATSADPGFFSYACAL 283
           K   KT  +  +C T++Q+KQI  +L  +   +   A   ++SF A S++    S+A  L
Sbjct: 8   KASKKTLFLLDKCRTISQIKQIQTHLTVSGTLKDPYAAAKIISFCALSSNQFSLSHAYRL 67

Query: 284 FHNLRRRTTFLYNSMIRGFVKSNQPIDAILCYKDMLRDGLIKNNY 418
           F  LR R+TF++N++IR F + N+P  AI+ +K+ML    + NNY
Sbjct: 68  FLGLRHRSTFIWNTVIRAFAEKNEPRKAIMLFKNMLYSNFLPNNY 112


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