BLASTX nr result

ID: Scutellaria23_contig00026947 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00026947
         (365 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003518059.1| PREDICTED: uncharacterized protein LOC100794...   183   1e-44
ref|XP_003535126.1| PREDICTED: uncharacterized protein LOC100795...   183   1e-44
ref|XP_002523405.1| Helicase, putative [Ricinus communis] gi|223...   176   2e-42
ref|XP_002303179.1| chromatin remodeling complex subunit [Populu...   171   6e-41
ref|XP_002882790.1| photoperiod-independent early flowering 1 [A...   167   1e-39

>ref|XP_003518059.1| PREDICTED: uncharacterized protein LOC100794898 [Glycine max]
          Length = 2041

 Score =  183 bits (465), Expect = 1e-44
 Identities = 88/121 (72%), Positives = 101/121 (83%)
 Frame = +1

Query: 1    VKHPVYDIHHQKHNPLSYNFSSKLADIVLSPVGRFKKMADLVESFMFAIPAARAPPPVCW 180
            ++HPV DIH  K NP+SY +SSKLADIVLSPV RF+KM D+VESFMFAIPAARAP PVCW
Sbjct: 941  LRHPVNDIHQVKANPVSYLYSSKLADIVLSPVERFQKMTDVVESFMFAIPAARAPSPVCW 1000

Query: 181  CSKGGSPVFIHQRSKGRWSQIFSPLLTPFRPAIVRRQVYFPDRRLIQFDCGKLQELAVLL 360
            CS   + VF+H   K + S++  PLL+P RPAIVRRQVYFPDRRLIQFDCGKLQELA+LL
Sbjct: 1001 CSTSETSVFLHPSYKQKCSEVLLPLLSPIRPAIVRRQVYFPDRRLIQFDCGKLQELAILL 1060

Query: 361  R 363
            R
Sbjct: 1061 R 1061


>ref|XP_003535126.1| PREDICTED: uncharacterized protein LOC100795613 [Glycine max]
          Length = 2057

 Score =  183 bits (464), Expect = 1e-44
 Identities = 87/121 (71%), Positives = 101/121 (83%)
 Frame = +1

Query: 1    VKHPVYDIHHQKHNPLSYNFSSKLADIVLSPVGRFKKMADLVESFMFAIPAARAPPPVCW 180
            ++HPVYDIH  K +P+SY +SSKLADIVLSPV RF+KM D+VESFMF+IPAARAP PVCW
Sbjct: 948  LRHPVYDIHQVKADPVSYLYSSKLADIVLSPVERFQKMTDVVESFMFSIPAARAPSPVCW 1007

Query: 181  CSKGGSPVFIHQRSKGRWSQIFSPLLTPFRPAIVRRQVYFPDRRLIQFDCGKLQELAVLL 360
            CS   + VF+H   K + S++  PLL P RPAIVRRQVYFPDRRLIQFDCGKLQELA+LL
Sbjct: 1008 CSTSETNVFLHPSYKQKCSEVLLPLLAPIRPAIVRRQVYFPDRRLIQFDCGKLQELAILL 1067

Query: 361  R 363
            R
Sbjct: 1068 R 1068


>ref|XP_002523405.1| Helicase, putative [Ricinus communis] gi|223537355|gb|EEF38984.1|
            Helicase, putative [Ricinus communis]
          Length = 2029

 Score =  176 bits (446), Expect = 2e-42
 Identities = 85/121 (70%), Positives = 101/121 (83%)
 Frame = +1

Query: 1    VKHPVYDIHHQKHNPLSYNFSSKLADIVLSPVGRFKKMADLVESFMFAIPAARAPPPVCW 180
            +K+PV DI+ QK + +SY +SSKLAD++LSPV RF +M DLVESFMFAIPAARAP P CW
Sbjct: 924  IKNPVDDIYCQKVDRVSYLYSSKLADVILSPVERFHRMTDLVESFMFAIPAARAPVPTCW 983

Query: 181  CSKGGSPVFIHQRSKGRWSQIFSPLLTPFRPAIVRRQVYFPDRRLIQFDCGKLQELAVLL 360
            CSK GS VF+H   K + S++  PLL+P RPAI+RRQVYFPDRRLIQFDCGKLQ+LAVLL
Sbjct: 984  CSKTGSSVFLHPTYKEKCSELLLPLLSPIRPAIIRRQVYFPDRRLIQFDCGKLQKLAVLL 1043

Query: 361  R 363
            R
Sbjct: 1044 R 1044


>ref|XP_002303179.1| chromatin remodeling complex subunit [Populus trichocarpa]
           gi|222840611|gb|EEE78158.1| chromatin remodeling complex
           subunit [Populus trichocarpa]
          Length = 1682

 Score =  171 bits (433), Expect = 6e-41
 Identities = 82/121 (67%), Positives = 98/121 (80%)
 Frame = +1

Query: 1   VKHPVYDIHHQKHNPLSYNFSSKLADIVLSPVGRFKKMADLVESFMFAIPAARAPPPVCW 180
           VKHP+YDIH QK   LS   SSKL D+VLSP+ RF+KM DLVESFMFAIPAAR+  P+ W
Sbjct: 563 VKHPIYDIHRQKVERLSSLCSSKLGDVVLSPIERFQKMTDLVESFMFAIPAARSTAPIFW 622

Query: 181 CSKGGSPVFIHQRSKGRWSQIFSPLLTPFRPAIVRRQVYFPDRRLIQFDCGKLQELAVLL 360
           CS+  +PVF+H   + + S++  PLL+P RPAIVRRQ+YFPDRRLIQFDCGKLQELA+LL
Sbjct: 623 CSQTRTPVFLHSTYEEKCSEMLLPLLSPIRPAIVRRQLYFPDRRLIQFDCGKLQELAILL 682

Query: 361 R 363
           R
Sbjct: 683 R 683


>ref|XP_002882790.1| photoperiod-independent early flowering 1 [Arabidopsis lyrata subsp.
            lyrata] gi|297328630|gb|EFH59049.1|
            photoperiod-independent early flowering 1 [Arabidopsis
            lyrata subsp. lyrata]
          Length = 2057

 Score =  167 bits (422), Expect = 1e-39
 Identities = 81/121 (66%), Positives = 95/121 (78%)
 Frame = +1

Query: 1    VKHPVYDIHHQKHNPLSYNFSSKLADIVLSPVGRFKKMADLVESFMFAIPAARAPPPVCW 180
            +K P+ DIHH K N  SY +SS LADIVLSP+ RF++M +LVE+F F IPAAR P P CW
Sbjct: 968  IKGPLDDIHHLKANCSSYMYSSILADIVLSPIERFQQMIELVEAFTFVIPAARVPSPACW 1027

Query: 181  CSKGGSPVFIHQRSKGRWSQIFSPLLTPFRPAIVRRQVYFPDRRLIQFDCGKLQELAVLL 360
            CSK  SPVF+    K + + + SPLL+P RPAIVRRQVYFPDRRLIQFDCGKLQELA+LL
Sbjct: 1028 CSKSDSPVFLSPSYKEKVTDLLSPLLSPIRPAIVRRQVYFPDRRLIQFDCGKLQELAMLL 1087

Query: 361  R 363
            R
Sbjct: 1088 R 1088


Top