BLASTX nr result

ID: Scutellaria23_contig00026916 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00026916
         (282 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN63320.1| hypothetical protein VITISV_026425 [Vitis vinifera]   107   1e-21
ref|XP_003631786.1| PREDICTED: pentatricopeptide repeat-containi...   104   6e-21
ref|XP_002516609.1| pentatricopeptide repeat-containing protein,...    82   3e-14
gb|EEE61183.1| hypothetical protein OsJ_15176 [Oryza sativa Japo...    77   2e-12
ref|XP_003635514.1| PREDICTED: pentatricopeptide repeat-containi...    76   3e-12

>emb|CAN63320.1| hypothetical protein VITISV_026425 [Vitis vinifera]
          Length = 722

 Score =  107 bits (267), Expect = 1e-21
 Identities = 50/90 (55%), Positives = 66/90 (73%)
 Frame = +3

Query: 3   ALVGGMLKSGMLEVANKLLLDMISRGCPLDDVMCNIYLHSLCCDGDSRRAMSIMESMMEK 182
           AL GG+LK G + VANKLLL +IS GC +D  + NIY H LC +  S  A+S+++SM+EK
Sbjct: 368 ALTGGLLKRGQVRVANKLLLYVISAGCTVDVAVYNIYFHCLCRENKSGEALSLLQSMVEK 427

Query: 183 GFRPTNISYNTILKGLCKQENMDEVLVLFD 272
           G  PTN+SYNTIL G C++ ++DE L LFD
Sbjct: 428 GLVPTNVSYNTILNGFCRENHIDEALQLFD 457


>ref|XP_003631786.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
           mitochondrial-like [Vitis vinifera]
          Length = 629

 Score =  104 bits (260), Expect = 6e-21
 Identities = 49/90 (54%), Positives = 65/90 (72%)
 Frame = +3

Query: 3   ALVGGMLKSGMLEVANKLLLDMISRGCPLDDVMCNIYLHSLCCDGDSRRAMSIMESMMEK 182
           AL GG+LK   + VANKLLL +IS GC +D  + NIY H LC +  S  A+S+++SM+EK
Sbjct: 260 ALTGGLLKRDQVRVANKLLLYVISAGCTVDVAVYNIYFHCLCRENKSGEALSLLQSMVEK 319

Query: 183 GFRPTNISYNTILKGLCKQENMDEVLVLFD 272
           G  PTN+SYNTIL G C++ ++DE L LFD
Sbjct: 320 GLVPTNVSYNTILNGFCRENHIDEALQLFD 349


>ref|XP_002516609.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223544429|gb|EEF45950.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 463

 Score = 82.4 bits (202), Expect = 3e-14
 Identities = 40/93 (43%), Positives = 57/93 (61%)
 Frame = +3

Query: 3   ALVGGMLKSGMLEVANKLLLDMISRGCPLDDVMCNIYLHSLCCDGDSRRAMSIMESMMEK 182
           +L G +L+ G +  A +LLLD +S GC  D  + N+YLH LC    S  A++++ SM+EK
Sbjct: 260 SLAGSLLRIGEVGFAYELLLDALSEGC-FDVAVYNLYLHCLCLHNRSGEALTVLNSMIEK 318

Query: 183 GFRPTNISYNTILKGLCKQENMDEVLVLFDRVK 281
           G  PTN+SYN IL G C++    + L L D  K
Sbjct: 319 GLTPTNVSYNIILDGFCRENGAADALELLDHFK 351


>gb|EEE61183.1| hypothetical protein OsJ_15176 [Oryza sativa Japonica Group]
          Length = 545

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 34/90 (37%), Positives = 55/90 (61%)
 Frame = +3

Query: 3   ALVGGMLKSGMLEVANKLLLDMISRGCPLDDVMCNIYLHSLCCDGDSRRAMSIMESMMEK 182
           +L  G LK+G +      +  + +R   +D +  NIYLHSLCCDG  ++A++++  MME+
Sbjct: 372 SLAAGFLKTGDVMTCQNFIRMVCNRSNHVDIITWNIYLHSLCCDGQVKKALALVSGMMER 431

Query: 183 GFRPTNISYNTILKGLCKQENMDEVLVLFD 272
           G  P+  +YNTILKG C + ++   L + D
Sbjct: 432 GLVPSTTTYNTILKGFCMELDLQGALQMLD 461


>ref|XP_003635514.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
           mitochondrial-like [Vitis vinifera]
          Length = 347

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 34/85 (40%), Positives = 52/85 (61%)
 Frame = +3

Query: 6   LVGGMLKSGMLEVANKLLLDMISRGCPLDDVMCNIYLHSLCCDGDSRRAMSIMESMMEKG 185
           L+   L+ G ++ A KL+ DM+ RGCPLDD+  N  + +LC  G+  + +++ E MM KG
Sbjct: 160 LIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKG 219

Query: 186 FRPTNISYNTILKGLCKQENMDEVL 260
             P NIS N ++ GLC+  N+   L
Sbjct: 220 LNPNNISCNILINGLCRTGNIQHAL 244



 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 28/90 (31%), Positives = 51/90 (56%)
 Frame = +3

Query: 6   LVGGMLKSGMLEVANKLLLDMISRGCPLDDVMCNIYLHSLCCDGDSRRAMSIMESMMEKG 185
           L+ G+ ++G ++ A + L DMI RG   D V  N  ++ LC  G ++ A+++ + +  +G
Sbjct: 230 LINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEG 289

Query: 186 FRPTNISYNTILKGLCKQENMDEVLVLFDR 275
             P  I+YNT++   CK+   D+  +L  R
Sbjct: 290 ICPDAITYNTLISWHCKEGMFDDAHLLLSR 319


Top