BLASTX nr result

ID: Scutellaria23_contig00026733 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00026733
         (557 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004140275.1| PREDICTED: pentatricopeptide repeat-containi...   100   2e-19
ref|XP_003528600.1| PREDICTED: pentatricopeptide repeat-containi...    97   2e-18
emb|CBI35582.3| unnamed protein product [Vitis vinifera]               64   2e-08
emb|CAN64573.1| hypothetical protein VITISV_010383 [Vitis vinifera]    64   2e-08
gb|ABA96976.1| pentatricopeptide, putative, expressed [Oryza sat...    62   5e-08

>ref|XP_004140275.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
           chloroplastic-like [Cucumis sativus]
          Length = 833

 Score =  100 bits (248), Expect = 2e-19
 Identities = 59/123 (47%), Positives = 78/123 (63%)
 Frame = -2

Query: 370 TQKAHALAVVLGRLPFSVSISAALILSYATHSSHPSTLKSLFIQTLPLSRSAFLHNTLIR 191
           T++ HAL ++ G LP SVS+ A+LIL+YA    HP +  SLF QT    R+AFL NTLIR
Sbjct: 73  TKQVHALGILNGFLPRSVSLCASLILNYAKFQ-HPGSFCSLFNQTFQNCRTAFLWNTLIR 131

Query: 190 ASTILSSGPYSKCVLDLGFSVYNDLLRATSFRPDDYTFPFVLKLCADFLCASKGLEVHGR 11
           A +I  +G +       GF  YN ++R    + DD+TFPFVLKLC+D     KG+EVHG 
Sbjct: 132 AHSIAWNGTFD------GFETYNRMVRR-GVQLDDHTFPFVLKLCSDSFDICKGMEVHGV 184

Query: 10  LIK 2
           + K
Sbjct: 185 VFK 187


>ref|XP_003528600.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic-like [Glycine max]
          Length = 813

 Score = 97.1 bits (240), Expect = 2e-18
 Identities = 59/123 (47%), Positives = 79/123 (64%)
 Frame = -2

Query: 370 TQKAHALAVVLGRLPFSVSISAALILSYATHSSHPSTLKSLFIQTLPLSRSAFLHNTLIR 191
           T++ HA +++ G LP SVS+ A+LIL YA+   HPS    LF  ++  SRSAFL NTLIR
Sbjct: 53  TKQVHAYSLLHGFLPRSVSLCASLILQYASFG-HPSNSLLLFQHSVAYSRSAFLWNTLIR 111

Query: 190 ASTILSSGPYSKCVLDLGFSVYNDLLRATSFRPDDYTFPFVLKLCADFLCASKGLEVHGR 11
           A++I         V D GF  YN ++RA   +PD+ T+PFVLK+C+DF+   KG EVHG 
Sbjct: 112 ANSIAG-------VFD-GFGTYNTMVRA-GVKPDECTYPFVLKVCSDFVEVRKGREVHGV 162

Query: 10  LIK 2
             K
Sbjct: 163 AFK 165


>emb|CBI35582.3| unnamed protein product [Vitis vinifera]
          Length = 638

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 36/73 (49%), Positives = 43/73 (58%)
 Frame = -2

Query: 220 SAFLHNTLIRASTILSSGPYSKCVLDLGFSVYNDLLRATSFRPDDYTFPFVLKLCADFLC 41
           +AFL NTLIR  +I   G         G  VYN ++R    RPDD+TFPFVLK CAD   
Sbjct: 6   TAFLWNTLIRGYSIAGVGG--------GLEVYNQMVRI-GVRPDDHTFPFVLKACADAFE 56

Query: 40  ASKGLEVHGRLIK 2
             KG EVHG ++K
Sbjct: 57  VRKGREVHGSVVK 69


>emb|CAN64573.1| hypothetical protein VITISV_010383 [Vitis vinifera]
          Length = 672

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 36/73 (49%), Positives = 43/73 (58%)
 Frame = -2

Query: 220 SAFLHNTLIRASTILSSGPYSKCVLDLGFSVYNDLLRATSFRPDDYTFPFVLKLCADFLC 41
           +AFL NTLIR  +I   G         G  VYN ++R    RPDD+TFPFVLK CAD   
Sbjct: 6   TAFLWNTLIRGYSIAGVGG--------GLEVYNQMVRI-GVRPDDHTFPFVLKACADAFE 56

Query: 40  ASKGLEVHGRLIK 2
             KG EVHG ++K
Sbjct: 57  VRKGREVHGXVVK 69


>gb|ABA96976.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
          Length = 780

 Score = 62.4 bits (150), Expect = 5e-08
 Identities = 51/124 (41%), Positives = 69/124 (55%), Gaps = 2/124 (1%)
 Frame = -2

Query: 367 QKAHALAVVLGRLPFSVSISAALILSYATHSSHPSTLKSLFIQTLPLSRSAFLHNTLIRA 188
           ++AHA ++V G L  S+ ++ AL+LSYA  S   S    L    L L RSAFL N+L RA
Sbjct: 33  RRAHAASLVSGALATSLPLAGALLLSYAALSDLASARLVLRHHPLRL-RSAFLWNSLSRA 91

Query: 187 STILSSGPYSKCVLDLGFSVYNDLLRATSFRPDDYTFPFVLKLCADFLCAS--KGLEVHG 14
              LSS       L     VYN +LR ++ RPDD TFPF L   A  + ++  KGLE+H 
Sbjct: 92  ---LSSASLPSEAL----RVYNLMLR-SAVRPDDRTFPFALHAAAAAVASAEDKGLELHA 143

Query: 13  RLIK 2
             ++
Sbjct: 144 SALR 147


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