BLASTX nr result

ID: Scutellaria23_contig00026640 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00026640
         (932 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279533.1| PREDICTED: DNA polymerase delta small subuni...   496   e-138
emb|CAN71889.1| hypothetical protein VITISV_040861 [Vitis vinifera]   496   e-138
ref|NP_181742.2| DNA polymerase delta subunit 2 [Arabidopsis tha...   489   e-136
ref|NP_973664.1| DNA polymerase delta subunit 2 [Arabidopsis tha...   489   e-136
gb|AAB88640.1| putative DNA polymerase delta small subunit [Arab...   483   e-134

>ref|XP_002279533.1| PREDICTED: DNA polymerase delta small subunit [Vitis vinifera]
            gi|297739835|emb|CBI30017.3| unnamed protein product
            [Vitis vinifera]
          Length = 439

 Score =  496 bits (1278), Expect = e-138
 Identities = 241/310 (77%), Positives = 270/310 (87%)
 Frame = +1

Query: 1    LEDESGRVKLRGTPLLPSVYVTGIVVALHGKETGAGDFMVEEIFEAGLPHQIERPLNSGE 180
            LEDESGRVKL GT LLPSVYVTG VV LHGKET AG+F+V++I +A LP QIE PL S E
Sbjct: 119  LEDESGRVKLGGTMLLPSVYVTGTVVGLHGKETSAGEFLVQDILDADLPPQIELPLKSRE 178

Query: 181  DKXXXXXXXXXXXXXXANPLHFQLLVDHITGHLGDEREQGIAAEIVQVVIAGNSVEFPRG 360
            DK              +NPL FQLLVDHITGHLGDE+EQGIAA+IV VVIAGNSV  PRG
Sbjct: 179  DKYVVFVSGLSVGSSTSNPLQFQLLVDHITGHLGDEKEQGIAAQIVHVVIAGNSVAVPRG 238

Query: 361  LLNGQNLGSKDQSRLTDPIKELDILLTQIAAGVPLDIMPGANDPANFALPQQPLNRCLFP 540
            LLNGQNL SKDQSRL++PIKELDILLTQIAAG+PLDIMPG +DPANF+LPQQPL+RCLFP
Sbjct: 239  LLNGQNLASKDQSRLSEPIKELDILLTQIAAGLPLDIMPGPDDPANFSLPQQPLHRCLFP 298

Query: 541  GSASFNTFRSGTNPHSFELDNVRFLGTSGQNIDDLAKYSDAEGKLGFLERTLRWRHLAPT 720
            GS+++N+FRS TNPHSFEL+N+RFLGTSGQN+DDL KYS+A+ KL F+ERTLRWRHLAPT
Sbjct: 299  GSSAYNSFRSCTNPHSFELENIRFLGTSGQNVDDLEKYSEAKDKLEFMERTLRWRHLAPT 358

Query: 721  APNTLGCYPFTDRDPFFIEICPHVYFVGNQDKFETSLIKGSDGQVVRLICIPRFSETGTA 900
            APNTLGCYPFTDRDPF IE CPHVYFVGNQDK+ET LIKGS+GQVVRLICIP+F ETG A
Sbjct: 359  APNTLGCYPFTDRDPFLIESCPHVYFVGNQDKYETRLIKGSEGQVVRLICIPKFCETGVA 418

Query: 901  VVLNLKNLEC 930
            VVLN++NLEC
Sbjct: 419  VVLNMRNLEC 428


>emb|CAN71889.1| hypothetical protein VITISV_040861 [Vitis vinifera]
          Length = 439

 Score =  496 bits (1278), Expect = e-138
 Identities = 242/310 (78%), Positives = 271/310 (87%)
 Frame = +1

Query: 1    LEDESGRVKLRGTPLLPSVYVTGIVVALHGKETGAGDFMVEEIFEAGLPHQIERPLNSGE 180
            LEDESGRVKL GT LLPSVYVTG VV LHGKET AG+F+V++I +A LP QIE PL S E
Sbjct: 119  LEDESGRVKLGGTMLLPSVYVTGTVVGLHGKETSAGEFLVQDILDADLPPQIELPLKSRE 178

Query: 181  DKXXXXXXXXXXXXXXANPLHFQLLVDHITGHLGDEREQGIAAEIVQVVIAGNSVEFPRG 360
            DK              +NPL FQLLVDHITGHLGDE+EQGIAA+IV VVIAGNSV  PRG
Sbjct: 179  DKYVVFVSGLSVGSSXSNPLQFQLLVDHITGHLGDEKEQGIAAQIVHVVIAGNSVAVPRG 238

Query: 361  LLNGQNLGSKDQSRLTDPIKELDILLTQIAAGVPLDIMPGANDPANFALPQQPLNRCLFP 540
            LLNGQNL SKDQSRL++PIKELDILLTQIAAG+PLDIMPG +DPANF+LPQQPL+RCLFP
Sbjct: 239  LLNGQNLASKDQSRLSEPIKELDILLTQIAAGLPLDIMPGPDDPANFSLPQQPLHRCLFP 298

Query: 541  GSASFNTFRSGTNPHSFELDNVRFLGTSGQNIDDLAKYSDAEGKLGFLERTLRWRHLAPT 720
            GS+++N+FRS TNPHSFEL+N+RFLGTSGQN+DDL KYS+A+ KL F+ERTLRWRHLAPT
Sbjct: 299  GSSAYNSFRSCTNPHSFELENIRFLGTSGQNVDDLEKYSEAKDKLEFMERTLRWRHLAPT 358

Query: 721  APNTLGCYPFTDRDPFFIEICPHVYFVGNQDKFETSLIKGSDGQVVRLICIPRFSETGTA 900
            APNTLGCYPFTDRDPF IE CPHVYFVGNQDK+ET LIKGS+GQVVRLICIP+F ETG A
Sbjct: 359  APNTLGCYPFTDRDPFLIESCPHVYFVGNQDKYETRLIKGSEGQVVRLICIPKFCETGVA 418

Query: 901  VVLNLKNLEC 930
            VVLN++NLEC
Sbjct: 419  VVLNMRNLEC 428


>ref|NP_181742.2| DNA polymerase delta subunit 2 [Arabidopsis thaliana]
            gi|330254979|gb|AEC10073.1| DNA polymerase delta subunit
            2 [Arabidopsis thaliana]
          Length = 441

 Score =  489 bits (1259), Expect = e-136
 Identities = 234/310 (75%), Positives = 265/310 (85%)
 Frame = +1

Query: 1    LEDESGRVKLRGTPLLPSVYVTGIVVALHGKETGAGDFMVEEIFEAGLPHQIERPLNSGE 180
            LEDESGRVKL G+ L P++YVTG+VVALHGKET AG+F VE++ EAGLP QIERP++  E
Sbjct: 120  LEDESGRVKLAGSALSPAIYVTGVVVALHGKETNAGEFFVEDVLEAGLPPQIERPIDLQE 179

Query: 181  DKXXXXXXXXXXXXXXANPLHFQLLVDHITGHLGDEREQGIAAEIVQVVIAGNSVEFPRG 360
            DK              ANPL FQLLVDHITGHLGDE EQG+AA+IV VVIAGNS EFPR 
Sbjct: 180  DKYVVLLSGLCIGSKSANPLQFQLLVDHITGHLGDEEEQGLAAQIVHVVIAGNSFEFPRK 239

Query: 361  LLNGQNLGSKDQSRLTDPIKELDILLTQIAAGVPLDIMPGANDPANFALPQQPLNRCLFP 540
            L+NGQNL SKDQS L +PIKELDI+L+QIAAGV +DIMPG NDPANFALPQQPLNRCLFP
Sbjct: 240  LINGQNLASKDQSTLYEPIKELDIMLSQIAAGVSVDIMPGTNDPANFALPQQPLNRCLFP 299

Query: 541  GSASFNTFRSGTNPHSFELDNVRFLGTSGQNIDDLAKYSDAEGKLGFLERTLRWRHLAPT 720
            GS+ +NTFRS TNPHSF++DN+RFLGTSGQNIDDL KYS+A+ KL F+ERTLRWRHLAPT
Sbjct: 300  GSSPYNTFRSCTNPHSFDVDNIRFLGTSGQNIDDLGKYSEAKSKLDFVERTLRWRHLAPT 359

Query: 721  APNTLGCYPFTDRDPFFIEICPHVYFVGNQDKFETSLIKGSDGQVVRLICIPRFSETGTA 900
            APNTLGCYPFTDRDPF IE CPHVYFVGNQDK++  LIKGS+GQ+VRLICIP+F ETG A
Sbjct: 360  APNTLGCYPFTDRDPFLIETCPHVYFVGNQDKYDNRLIKGSEGQLVRLICIPKFCETGIA 419

Query: 901  VVLNLKNLEC 930
            V +NL+NLEC
Sbjct: 420  VAVNLRNLEC 429


>ref|NP_973664.1| DNA polymerase delta subunit 2 [Arabidopsis thaliana]
            gi|322510023|sp|O48520.2|DPOD2_ARATH RecName: Full=DNA
            polymerase delta small subunit gi|22531160|gb|AAM97084.1|
            putative DNA polymerase delta small subunit [Arabidopsis
            thaliana] gi|31376377|gb|AAP49515.1| At2g42120
            [Arabidopsis thaliana] gi|62320658|dbj|BAD95325.1| DNA
            polymerase delta small subunit like protein [Arabidopsis
            thaliana] gi|330254978|gb|AEC10072.1| DNA polymerase
            delta subunit 2 [Arabidopsis thaliana]
          Length = 440

 Score =  489 bits (1259), Expect = e-136
 Identities = 234/310 (75%), Positives = 265/310 (85%)
 Frame = +1

Query: 1    LEDESGRVKLRGTPLLPSVYVTGIVVALHGKETGAGDFMVEEIFEAGLPHQIERPLNSGE 180
            LEDESGRVKL G+ L P++YVTG+VVALHGKET AG+F VE++ EAGLP QIERP++  E
Sbjct: 119  LEDESGRVKLAGSALSPAIYVTGVVVALHGKETNAGEFFVEDVLEAGLPPQIERPIDLQE 178

Query: 181  DKXXXXXXXXXXXXXXANPLHFQLLVDHITGHLGDEREQGIAAEIVQVVIAGNSVEFPRG 360
            DK              ANPL FQLLVDHITGHLGDE EQG+AA+IV VVIAGNS EFPR 
Sbjct: 179  DKYVVLLSGLCIGSKSANPLQFQLLVDHITGHLGDEEEQGLAAQIVHVVIAGNSFEFPRK 238

Query: 361  LLNGQNLGSKDQSRLTDPIKELDILLTQIAAGVPLDIMPGANDPANFALPQQPLNRCLFP 540
            L+NGQNL SKDQS L +PIKELDI+L+QIAAGV +DIMPG NDPANFALPQQPLNRCLFP
Sbjct: 239  LINGQNLASKDQSTLYEPIKELDIMLSQIAAGVSVDIMPGTNDPANFALPQQPLNRCLFP 298

Query: 541  GSASFNTFRSGTNPHSFELDNVRFLGTSGQNIDDLAKYSDAEGKLGFLERTLRWRHLAPT 720
            GS+ +NTFRS TNPHSF++DN+RFLGTSGQNIDDL KYS+A+ KL F+ERTLRWRHLAPT
Sbjct: 299  GSSPYNTFRSCTNPHSFDVDNIRFLGTSGQNIDDLGKYSEAKSKLDFVERTLRWRHLAPT 358

Query: 721  APNTLGCYPFTDRDPFFIEICPHVYFVGNQDKFETSLIKGSDGQVVRLICIPRFSETGTA 900
            APNTLGCYPFTDRDPF IE CPHVYFVGNQDK++  LIKGS+GQ+VRLICIP+F ETG A
Sbjct: 359  APNTLGCYPFTDRDPFLIETCPHVYFVGNQDKYDNRLIKGSEGQLVRLICIPKFCETGIA 418

Query: 901  VVLNLKNLEC 930
            V +NL+NLEC
Sbjct: 419  VAVNLRNLEC 428


>gb|AAB88640.1| putative DNA polymerase delta small subunit [Arabidopsis thaliana]
          Length = 456

 Score =  483 bits (1243), Expect = e-134
 Identities = 234/315 (74%), Positives = 265/315 (84%), Gaps = 5/315 (1%)
 Frame = +1

Query: 1    LEDESGRVKLRGTPLLPSVYVTGIVVALHGKETGAGDFMVEEIFEAGLPHQIERPLNSGE 180
            LEDESGRVKL G+ L P++YVTG+VVALHGKET AG+F VE++ EAGLP QIERP++  E
Sbjct: 130  LEDESGRVKLAGSALSPAIYVTGVVVALHGKETNAGEFFVEDVLEAGLPPQIERPIDLQE 189

Query: 181  DKXXXXXXXXXXXXXXANPLHFQLLVDHITGHLGDEREQGIAAEIVQVVIAGNSVEFPRG 360
            DK              ANPL FQLLVDHITGHLGDE EQG+AA+IV VVIAGNS EFPR 
Sbjct: 190  DKYVVLLSGLCIGSKSANPLQFQLLVDHITGHLGDEEEQGLAAQIVHVVIAGNSFEFPRK 249

Query: 361  LLNGQ-----NLGSKDQSRLTDPIKELDILLTQIAAGVPLDIMPGANDPANFALPQQPLN 525
            L+NGQ     NL SKDQS L +PIKELDI+L+QIAAGV +DIMPG NDPANFALPQQPLN
Sbjct: 250  LINGQVLITFNLASKDQSTLYEPIKELDIMLSQIAAGVSVDIMPGTNDPANFALPQQPLN 309

Query: 526  RCLFPGSASFNTFRSGTNPHSFELDNVRFLGTSGQNIDDLAKYSDAEGKLGFLERTLRWR 705
            RCLFPGS+ +NTFRS TNPHSF++DN+RFLGTSGQNIDDL KYS+A+ KL F+ERTLRWR
Sbjct: 310  RCLFPGSSPYNTFRSCTNPHSFDVDNIRFLGTSGQNIDDLGKYSEAKSKLDFVERTLRWR 369

Query: 706  HLAPTAPNTLGCYPFTDRDPFFIEICPHVYFVGNQDKFETSLIKGSDGQVVRLICIPRFS 885
            HLAPTAPNTLGCYPFTDRDPF IE CPHVYFVGNQDK++  LIKGS+GQ+VRLICIP+F 
Sbjct: 370  HLAPTAPNTLGCYPFTDRDPFLIETCPHVYFVGNQDKYDNRLIKGSEGQLVRLICIPKFC 429

Query: 886  ETGTAVVLNLKNLEC 930
            ETG AV +NL+NLEC
Sbjct: 430  ETGIAVAVNLRNLEC 444


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