BLASTX nr result

ID: Scutellaria23_contig00026633 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00026633
         (406 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004163477.1| PREDICTED: pentatricopeptide repeat-containi...   110   2e-22
ref|XP_004149063.1| PREDICTED: pentatricopeptide repeat-containi...   110   2e-22
ref|XP_002305756.1| predicted protein [Populus trichocarpa] gi|2...   108   5e-22
emb|CAN75464.1| hypothetical protein VITISV_006518 [Vitis vinifera]   104   9e-21
emb|CBI30660.3| unnamed protein product [Vitis vinifera]              103   1e-20

>ref|XP_004163477.1| PREDICTED: pentatricopeptide repeat-containing protein At1g28690,
           mitochondrial-like [Cucumis sativus]
          Length = 523

 Score =  110 bits (274), Expect = 2e-22
 Identities = 59/125 (47%), Positives = 76/125 (60%), Gaps = 5/125 (4%)
 Frame = -3

Query: 362 MRHDKLCNI-----KSFVQPIPSFRQTEVNSPAVFSPASALQNYINSDHPFHGQKIHAHF 198
           M++D+  ++      S +  +PSF  T+ ++    S +SALQ+YINSD P HG KIHAH 
Sbjct: 1   MKNDRFKSVTHRVFSSLIDYVPSFAPTQTSNQTSTSLSSALQHYINSDDPSHGLKIHAHI 60

Query: 197 LKTGFKPNVNXXXXXXXXXXXXXXXXYARRVFDELPQRTLSAYNYMISGYVKHGLVEKSF 18
           LKTGF PN N                +AR+ FD LPQ+TLSAYNYMI GY+K G V +S 
Sbjct: 61  LKTGFIPNTNISIKLLILHLKCKSLKFARQAFDALPQKTLSAYNYMIGGYMKMGEVPESL 120

Query: 17  DLVRE 3
            LVRE
Sbjct: 121 PLVRE 125


>ref|XP_004149063.1| PREDICTED: pentatricopeptide repeat-containing protein At1g28690,
           mitochondrial-like [Cucumis sativus]
          Length = 523

 Score =  110 bits (274), Expect = 2e-22
 Identities = 59/125 (47%), Positives = 76/125 (60%), Gaps = 5/125 (4%)
 Frame = -3

Query: 362 MRHDKLCNI-----KSFVQPIPSFRQTEVNSPAVFSPASALQNYINSDHPFHGQKIHAHF 198
           M++D+  ++      S +  +PSF  T+ ++    S +SALQ+YINSD P HG KIHAH 
Sbjct: 1   MKNDRFKSVTHRVFSSLIDYVPSFAPTQTSNQTSTSLSSALQHYINSDDPSHGLKIHAHI 60

Query: 197 LKTGFKPNVNXXXXXXXXXXXXXXXXYARRVFDELPQRTLSAYNYMISGYVKHGLVEKSF 18
           LKTGF PN N                +AR+ FD LPQ+TLSAYNYMI GY+K G V +S 
Sbjct: 61  LKTGFIPNTNISIKLLILHLKCKSLKFARQAFDALPQKTLSAYNYMIGGYMKMGEVPESL 120

Query: 17  DLVRE 3
            LVRE
Sbjct: 121 PLVRE 125


>ref|XP_002305756.1| predicted protein [Populus trichocarpa] gi|222848720|gb|EEE86267.1|
           predicted protein [Populus trichocarpa]
          Length = 530

 Score =  108 bits (270), Expect = 5e-22
 Identities = 52/87 (59%), Positives = 62/87 (71%)
 Frame = -3

Query: 266 ASALQNYINSDHPFHGQKIHAHFLKTGFKPNVNXXXXXXXXXXXXXXXXYARRVFDELPQ 87
           +SALQ+YINSD PFHGQKIH H LKTGF+PN+N                YA ++FDELPQ
Sbjct: 46  SSALQHYINSDTPFHGQKIHTHILKTGFRPNINISIKLLILHLKCRCLKYAHQLFDELPQ 105

Query: 86  RTLSAYNYMISGYVKHGLVEKSFDLVR 6
           RTLSAYNYMI GY++ GL E+S  +VR
Sbjct: 106 RTLSAYNYMIGGYLRQGLFEESISMVR 132


>emb|CAN75464.1| hypothetical protein VITISV_006518 [Vitis vinifera]
          Length = 504

 Score =  104 bits (259), Expect = 9e-21
 Identities = 56/113 (49%), Positives = 70/113 (61%), Gaps = 2/113 (1%)
 Frame = -3

Query: 341 NIKSFVQPIPSFRQTE--VNSPAVFSPASALQNYINSDHPFHGQKIHAHFLKTGFKPNVN 168
           N +  V P  SF      ++SP   S + ALQ+YINSD P HGQKIH+H LK GF+PN N
Sbjct: 19  NQRPXVPPNQSFPPASDXISSPTAISLSVALQHYINSDFPSHGQKIHSHILKIGFEPNTN 78

Query: 167 XXXXXXXXXXXXXXXXYARRVFDELPQRTLSAYNYMISGYVKHGLVEKSFDLV 9
                           YAR++FDE+ Q TLSAYNYMISGY+KHG +E+  +LV
Sbjct: 79  VSIKLLILHLKSRCLRYARQLFDEMHQPTLSAYNYMISGYLKHGQIEELLNLV 131


>emb|CBI30660.3| unnamed protein product [Vitis vinifera]
          Length = 598

 Score =  103 bits (258), Expect = 1e-20
 Identities = 56/113 (49%), Positives = 70/113 (61%), Gaps = 2/113 (1%)
 Frame = -3

Query: 341 NIKSFVQPIPSFRQTE--VNSPAVFSPASALQNYINSDHPFHGQKIHAHFLKTGFKPNVN 168
           N +  V P  SF      ++SP   S + ALQ+YINSD P HGQKIH+H LK GF+PN N
Sbjct: 19  NQRPSVPPNQSFPPASDYISSPTAISLSVALQHYINSDFPSHGQKIHSHILKIGFEPNTN 78

Query: 167 XXXXXXXXXXXXXXXXYARRVFDELPQRTLSAYNYMISGYVKHGLVEKSFDLV 9
                           YAR++FDE+ Q TLSAYNYMISGY+KHG +E+  +LV
Sbjct: 79  VSIKLLILHLKSRCLRYARQLFDEMHQPTLSAYNYMISGYLKHGQIEELLNLV 131


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