BLASTX nr result

ID: Scutellaria23_contig00026500 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00026500
         (478 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK44336.1| unknown [Lotus japonicus]                               77   1e-12
ref|XP_003546119.1| PREDICTED: F-box/kelch-repeat protein At3g23...    72   4e-11
ref|XP_003594083.1| F-box/kelch-repeat protein [Medicago truncat...    70   2e-10
ref|NP_001241466.1| uncharacterized protein LOC100815072 [Glycin...    67   2e-09
ref|XP_002312730.1| predicted protein [Populus trichocarpa] gi|2...    65   6e-09

>gb|AFK44336.1| unknown [Lotus japonicus]
          Length = 193

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 41/101 (40%), Positives = 57/101 (56%)
 Frame = +3

Query: 174 LARLPVKCLLKFRCVXXXXXXXXXXXGFIKAHLNYSKNNPTCTNQNIMLTLSQPRFNLKH 353
           L+RLPVK LLKFRCV            FIK HL+ SK +    +  I+L+ +   F+LK 
Sbjct: 72  LSRLPVKSLLKFRCVCKSWMLLISDPYFIKKHLHLSKQSTLFNHHRIILSATTAEFHLKS 131

Query: 354 FSAQSLMYGDAPVASEIDYPRKSPHRAVWNVGSCNGIVCIA 476
            S  SL    + V  +++YP K+ +R    VGSCNG++C A
Sbjct: 132 CSVSSLFNSTSTVCEDLNYPVKNKYRHDGIVGSCNGLLCFA 172


>ref|XP_003546119.1| PREDICTED: F-box/kelch-repeat protein At3g23880-like [Glycine max]
          Length = 405

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 40/101 (39%), Positives = 56/101 (55%)
 Frame = +3

Query: 174 LARLPVKCLLKFRCVXXXXXXXXXXXGFIKAHLNYSKNNPTCTNQNIMLTLSQPRFNLKH 353
           L+RLPVK LL+FRCV            F+K HL+ S  +   T+  I+L+ +   F+LK 
Sbjct: 58  LSRLPVKSLLQFRCVCKSWMSLIYDPYFMKKHLHLSSRSTHFTHHRIILSATTAEFHLKS 117

Query: 354 FSAQSLMYGDAPVASEIDYPRKSPHRAVWNVGSCNGIVCIA 476
            S  SL    + V  E++YP K+  R    VGSCNG++C A
Sbjct: 118 CSLSSLFNNLSTVCDELNYPVKNKFRHDGIVGSCNGLLCFA 158


>ref|XP_003594083.1| F-box/kelch-repeat protein [Medicago truncatula]
           gi|355483131|gb|AES64334.1| F-box/kelch-repeat protein
           [Medicago truncatula]
          Length = 366

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 39/102 (38%), Positives = 57/102 (55%), Gaps = 1/102 (0%)
 Frame = +3

Query: 174 LARLPVKCLLKFRCVXXXXXXXXXXXGFIKAHLNYS-KNNPTCTNQNIMLTLSQPRFNLK 350
           L +LP+K LL+FRCV            FIK  L++S +N    TN  I+L+ +   F+LK
Sbjct: 17  LIKLPIKSLLRFRCVCKSWLHIISNPYFIKKQLHFSTQNTHFTTNHRIILSATTAEFHLK 76

Query: 351 HFSAQSLMYGDAPVASEIDYPRKSPHRAVWNVGSCNGIVCIA 476
             S  SL    + V+ +++YP K+  R    VGSCNG++C A
Sbjct: 77  SCSITSLFNNPSTVSDDLNYPVKNKFRHDGIVGSCNGLLCFA 118


>ref|NP_001241466.1| uncharacterized protein LOC100815072 [Glycine max]
           gi|255637050|gb|ACU18857.1| unknown [Glycine max]
          Length = 406

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 39/102 (38%), Positives = 55/102 (53%), Gaps = 1/102 (0%)
 Frame = +3

Query: 174 LARLPVKCLLKFRCVXXXXXXXXXXXGFIKAHLNYSKNNPTCTNQNIMLTLSQPRFNLKH 353
           L+RLPVK LL+FRCV            F+K HL+ S      T+  I+L+ +   F+LK 
Sbjct: 58  LSRLPVKSLLQFRCVCKSWMSLISDPYFMKKHLHLSSRCTHFTHHRIILSATTAEFHLKS 117

Query: 354 FSAQSLMYG-DAPVASEIDYPRKSPHRAVWNVGSCNGIVCIA 476
            S  SL     + V  +++YP K+  R    VGSCNG++C A
Sbjct: 118 CSLSSLFNNPSSTVCDDLNYPVKNKFRHDGIVGSCNGLLCFA 159


>ref|XP_002312730.1| predicted protein [Populus trichocarpa] gi|222852550|gb|EEE90097.1|
           predicted protein [Populus trichocarpa]
          Length = 445

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 42/105 (40%), Positives = 57/105 (54%), Gaps = 5/105 (4%)
 Frame = +3

Query: 174 LARLPVKCLLKFRCVXXXXXXXXXXXGFIKAHL----NYSKNNPTCTNQNIMLTLSQPRF 341
           L+RLP K L+KFRCV            FIK HL    N S+N+P  + + I+++ S+P F
Sbjct: 88  LSRLPAKSLIKFRCVSKSFKSLISNPQFIKTHLEKVKNLSRNDPDFSPE-IVISSSEPLF 146

Query: 342 NLKHFSAQSLMYGDAPVASEID-YPRKSPHRAVWNVGSCNGIVCI 473
            LK  S  S+       A  ID Y  K  +R  W VGSC+G+VC+
Sbjct: 147 RLKSCSLYSVYNNPVTDAVVIDYYLLKDIYRYDWVVGSCDGLVCL 191


Top