BLASTX nr result

ID: Scutellaria23_contig00026491 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00026491
         (271 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278273.1| PREDICTED: replication protein A 70 kDa DNA-...   165   3e-39
ref|NP_973433.1| replication factor A1 [Arabidopsis thaliana] gi...   164   9e-39
ref|NP_178690.1| replication factor A1 [Arabidopsis thaliana] gi...   164   9e-39
ref|XP_002883738.1| hypothetical protein ARALYDRAFT_899421 [Arab...   164   9e-39
ref|XP_002330505.1| predicted protein [Populus trichocarpa] gi|2...   160   1e-37

>ref|XP_002278273.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit [Vitis
           vinifera] gi|297738589|emb|CBI27834.3| unnamed protein
           product [Vitis vinifera]
          Length = 622

 Score =  165 bits (418), Expect = 3e-39
 Identities = 77/90 (85%), Positives = 87/90 (96%)
 Frame = -2

Query: 270 VGKVYVISKGSLKPAQKNFNHLKNEWEIFLDITSSVDLCPDEDASIPRQQFSFRPISEIE 91
           VGKVY+ISKGSLKPAQKNFNHLKNEWEIFL+ +SSV+LCPDED SIP+QQFSFRPISEIE
Sbjct: 246 VGKVYLISKGSLKPAQKNFNHLKNEWEIFLEASSSVELCPDEDGSIPKQQFSFRPISEIE 305

Query: 90  NAESNSILDIIGVVVTVNPSVPILRKNGME 1
           N E+NSILD+IG+V++VNPSVPILRKNGME
Sbjct: 306 NVENNSILDVIGIVISVNPSVPILRKNGME 335


>ref|NP_973433.1| replication factor A1 [Arabidopsis thaliana]
           gi|330250915|gb|AEC06009.1| replication factor A1
           [Arabidopsis thaliana]
          Length = 617

 Score =  164 bits (414), Expect = 9e-39
 Identities = 77/90 (85%), Positives = 87/90 (96%)
 Frame = -2

Query: 270 VGKVYVISKGSLKPAQKNFNHLKNEWEIFLDITSSVDLCPDEDASIPRQQFSFRPISEIE 91
           VGKVY+ISKGSLKPAQKNFNHLKNEWEIFL+ TS+V+LCPDED SIP+QQFSFRPIS+IE
Sbjct: 242 VGKVYLISKGSLKPAQKNFNHLKNEWEIFLESTSTVELCPDEDGSIPKQQFSFRPISDIE 301

Query: 90  NAESNSILDIIGVVVTVNPSVPILRKNGME 1
           NAE+N+ILD+IGVV +VNPSVPILRKNGME
Sbjct: 302 NAENNTILDVIGVVTSVNPSVPILRKNGME 331


>ref|NP_178690.1| replication factor A1 [Arabidopsis thaliana]
           gi|4584356|gb|AAD25150.1| putative replication protein
           A1 [Arabidopsis thaliana] gi|26452416|dbj|BAC43293.1|
           putative replication protein A1 [Arabidopsis thaliana]
           gi|29029004|gb|AAO64881.1| At2g06510 [Arabidopsis
           thaliana] gi|330250916|gb|AEC06010.1| replication factor
           A1 [Arabidopsis thaliana]
          Length = 640

 Score =  164 bits (414), Expect = 9e-39
 Identities = 77/90 (85%), Positives = 87/90 (96%)
 Frame = -2

Query: 270 VGKVYVISKGSLKPAQKNFNHLKNEWEIFLDITSSVDLCPDEDASIPRQQFSFRPISEIE 91
           VGKVY+ISKGSLKPAQKNFNHLKNEWEIFL+ TS+V+LCPDED SIP+QQFSFRPIS+IE
Sbjct: 265 VGKVYLISKGSLKPAQKNFNHLKNEWEIFLESTSTVELCPDEDGSIPKQQFSFRPISDIE 324

Query: 90  NAESNSILDIIGVVVTVNPSVPILRKNGME 1
           NAE+N+ILD+IGVV +VNPSVPILRKNGME
Sbjct: 325 NAENNTILDVIGVVTSVNPSVPILRKNGME 354


>ref|XP_002883738.1| hypothetical protein ARALYDRAFT_899421 [Arabidopsis lyrata subsp.
           lyrata] gi|297329578|gb|EFH59997.1| hypothetical protein
           ARALYDRAFT_899421 [Arabidopsis lyrata subsp. lyrata]
          Length = 640

 Score =  164 bits (414), Expect = 9e-39
 Identities = 77/90 (85%), Positives = 87/90 (96%)
 Frame = -2

Query: 270 VGKVYVISKGSLKPAQKNFNHLKNEWEIFLDITSSVDLCPDEDASIPRQQFSFRPISEIE 91
           VGKVY+ISKGSLKPAQKN+NHLKNEWEIFL+ TS+V+LCPDED SIPRQQFSFRPIS+IE
Sbjct: 265 VGKVYLISKGSLKPAQKNYNHLKNEWEIFLESTSTVELCPDEDGSIPRQQFSFRPISDIE 324

Query: 90  NAESNSILDIIGVVVTVNPSVPILRKNGME 1
           NAE+N+ILD+IGVV +VNPSVPILRKNGME
Sbjct: 325 NAENNTILDVIGVVTSVNPSVPILRKNGME 354


>ref|XP_002330505.1| predicted protein [Populus trichocarpa] gi|222872439|gb|EEF09570.1|
           predicted protein [Populus trichocarpa]
          Length = 502

 Score =  160 bits (404), Expect = 1e-37
 Identities = 75/90 (83%), Positives = 86/90 (95%)
 Frame = -2

Query: 270 VGKVYVISKGSLKPAQKNFNHLKNEWEIFLDITSSVDLCPDEDASIPRQQFSFRPISEIE 91
           VGKVY+ISKGSLKPAQKNFNHLKN+WEIFL+ TS+VDLCP+ED SIP+QQFSF+PISEIE
Sbjct: 184 VGKVYLISKGSLKPAQKNFNHLKNDWEIFLEATSTVDLCPEEDGSIPQQQFSFKPISEIE 243

Query: 90  NAESNSILDIIGVVVTVNPSVPILRKNGME 1
            AE+NSI D+IGVV++VNPSVPILRKNGME
Sbjct: 244 IAENNSIFDVIGVVISVNPSVPILRKNGME 273


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