BLASTX nr result

ID: Scutellaria23_contig00026279 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00026279
         (325 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003522451.1| PREDICTED: uncharacterized protein LOC100798...    89   4e-16
ref|XP_003526921.1| PREDICTED: U5 small nuclear ribonucleoprotei...    87   1e-15
ref|XP_002318173.1| predicted protein [Populus trichocarpa] gi|2...    79   4e-13
ref|XP_003602749.1| WD repeat-containing protein, putative [Medi...    77   1e-12
ref|XP_002280902.1| PREDICTED: uncharacterized WD repeat-contain...    77   1e-12

>ref|XP_003522451.1| PREDICTED: uncharacterized protein LOC100798141 [Glycine max]
          Length = 1494

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 47/84 (55%), Positives = 62/84 (73%), Gaps = 1/84 (1%)
 Frame = +1

Query: 1   ALVALIEHRTKEVEHLRQRITYYNSQLDLAEKRLEDTQNKLARLRGRKTKASKTLTNGRN 180
           ALVALIEHRT EV++LR RI YY +QLD AEKRL+D+++KLARLRG+   +  TL +G  
Sbjct: 19  ALVALIEHRTHEVKNLRHRIAYYKTQLDEAEKRLQDSESKLARLRGQTVSSRSTLDDGIE 78

Query: 181 EMKV-GTSTSPIRRNESTSQKQSQ 249
            +K    S+SPI RNE +++ Q Q
Sbjct: 79  TLKTKSRSSSPIDRNEVSTKSQHQ 102


>ref|XP_003526921.1| PREDICTED: U5 small nuclear ribonucleoprotein 40 kDa protein-like
           [Glycine max]
          Length = 533

 Score = 87.0 bits (214), Expect = 1e-15
 Identities = 46/84 (54%), Positives = 61/84 (72%), Gaps = 1/84 (1%)
 Frame = +1

Query: 1   ALVALIEHRTKEVEHLRQRITYYNSQLDLAEKRLEDTQNKLARLRGRKTKASKTLTNGRN 180
           ALVALIEHRT EV++LR RI YY +QLD AEKRL+D+++KLARLRG+   +  TL +G  
Sbjct: 19  ALVALIEHRTHEVKNLRHRIAYYKTQLDEAEKRLQDSESKLARLRGQTVSSRSTLDDGIK 78

Query: 181 EMKV-GTSTSPIRRNESTSQKQSQ 249
            +K    S SPI RNE +++ + Q
Sbjct: 79  TLKTERRSNSPIDRNEGSTKNRHQ 102


>ref|XP_002318173.1| predicted protein [Populus trichocarpa] gi|222858846|gb|EEE96393.1|
           predicted protein [Populus trichocarpa]
          Length = 493

 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 43/97 (44%), Positives = 64/97 (65%), Gaps = 4/97 (4%)
 Frame = +1

Query: 1   ALVALIEHRTKEVEHLRQRITYYNSQLDLAEKRLEDTQNKLARLRGRKTKA---SKTLTN 171
           A +ALIEHR+ EV+HL+QR++YY +QL  AEKRLED+Q KLARL GR   +     ++ N
Sbjct: 13  AFIALIEHRSHEVQHLKQRLSYYKTQLVEAEKRLEDSQTKLARLSGRSNASVANKPSVEN 72

Query: 172 GRNEMKV-GTSTSPIRRNESTSQKQSQFPVHHLNTVK 279
           G  ++K+   S SP+R NE++S  +  +   ++   K
Sbjct: 73  GIKKVKMERKSPSPVRLNEASSSIEKPYSAANVKVEK 109


>ref|XP_003602749.1| WD repeat-containing protein, putative [Medicago truncatula]
           gi|355491797|gb|AES73000.1| WD repeat-containing
           protein, putative [Medicago truncatula]
          Length = 517

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 48/91 (52%), Positives = 62/91 (68%), Gaps = 8/91 (8%)
 Frame = +1

Query: 1   ALVALIEHRTKEVEHLRQRITYYNSQLDLAEKRLEDTQNKLARLRGRKTKASKTLTNGRN 180
           ALVALIEHRT+EV +LR R+ Y  +QLD AEKRL+D+++KLARLRG+ T   K +TN  +
Sbjct: 17  ALVALIEHRTREVNNLRHRLAYTKNQLDDAEKRLKDSESKLARLRGQTT---KKITNSDD 73

Query: 181 E------MKVGTSTSPIRRNEST--SQKQSQ 249
           +       K   S SPI RNE +  S KQS+
Sbjct: 74  DNGTVAVKKERRSNSPIDRNERSYKSNKQSK 104


>ref|XP_002280902.1| PREDICTED: uncharacterized WD repeat-containing protein alr3466
           [Vitis vinifera] gi|297734510|emb|CBI15757.3| unnamed
           protein product [Vitis vinifera]
          Length = 526

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 44/75 (58%), Positives = 54/75 (72%), Gaps = 3/75 (4%)
 Frame = +1

Query: 1   ALVALIEHRTKEVEHLRQRITYYNSQLDLAEKRLEDTQNKLARLRGRKTKAS--KTLTNG 174
           ALVALIEHRTKEVEH+R+RITYY SQL  AEK+L D+Q +L RLR +    S    L NG
Sbjct: 31  ALVALIEHRTKEVEHIRKRITYYQSQLQEAEKKLLDSQAQLGRLRSKDNLVSSRSPLDNG 90

Query: 175 RNEMKV-GTSTSPIR 216
             ++KV   STSP++
Sbjct: 91  TKKVKVERRSTSPLQ 105


Top