BLASTX nr result

ID: Scutellaria23_contig00026232 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00026232
         (392 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004149831.1| PREDICTED: pentatricopeptide repeat-containi...   183   1e-44
gb|AAG29200.1|AC078898_10 hypothetical protein [Arabidopsis thal...   164   5e-39
ref|NP_177865.2| pentatricopeptide repeat-containing protein [Ar...   164   5e-39
ref|XP_002887681.1| binding protein [Arabidopsis lyrata subsp. l...   162   3e-38
ref|XP_002279168.1| PREDICTED: pentatricopeptide repeat-containi...   154   7e-36

>ref|XP_004149831.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g77405-like [Cucumis sativus]
           gi|449518241|ref|XP_004166151.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At1g77405-like [Cucumis sativus]
          Length = 445

 Score =  183 bits (464), Expect = 1e-44
 Identities = 88/125 (70%), Positives = 100/125 (80%)
 Frame = -1

Query: 377 RNLRHEAVKYKKGSLILGPAAHRDPRKLNLGLEKALEFYYWVETQFGFQHNELTCREMAI 198
           R L+ EA K++   L+LGP AHRDP K  LGL KALEF+YWVET FGFQH+E+TCREMA 
Sbjct: 83  RKLKEEAYKFRNNVLVLGPGAHRDPFKAKLGLNKALEFFYWVETHFGFQHDEITCREMAC 142

Query: 197 VLVKGNRMNLFWDFLKNMSGRYKKVNLVTTATMTCLIKALGEEGLVNEALSAFYRMKQFH 18
           VL +GN +   WDFLK MS R +   LVTTAT+TCLIK LGEEGLVNEAL+AFYRMKQFH
Sbjct: 143 VLARGNTLMGLWDFLKEMS-RRENGGLVTTATITCLIKVLGEEGLVNEALTAFYRMKQFH 201

Query: 17  CKPDV 3
           CKPDV
Sbjct: 202 CKPDV 206


>gb|AAG29200.1|AC078898_10 hypothetical protein [Arabidopsis thaliana]
          Length = 410

 Score =  164 bits (416), Expect = 5e-39
 Identities = 72/125 (57%), Positives = 97/125 (77%)
 Frame = -1

Query: 377 RNLRHEAVKYKKGSLILGPAAHRDPRKLNLGLEKALEFYYWVETQFGFQHNELTCREMAI 198
           RNL  E+ + +   L+LGP A+ DP+K+++GL+KALEF++W+ET FGF HNE+TCR+MA 
Sbjct: 76  RNLSDESQRRRSEVLVLGPGAYMDPKKVSIGLQKALEFFFWIETHFGFDHNEITCRDMAC 135

Query: 197 VLVKGNRMNLFWDFLKNMSGRYKKVNLVTTATMTCLIKALGEEGLVNEALSAFYRMKQFH 18
           +L KGN     WDFL+ +S R    N+VTTA++TCL+K LGEEG V EAL+ FYRMK++H
Sbjct: 136 LLAKGNDFKGLWDFLRQVSRRENGKNVVTTASITCLMKCLGEEGFVKEALATFYRMKEYH 195

Query: 17  CKPDV 3
           CKPDV
Sbjct: 196 CKPDV 200


>ref|NP_177865.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|122244095|sp|Q1PFC5.1|PP130_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At1g77405 gi|91806103|gb|ABE65780.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
           gi|332197853|gb|AEE35974.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 458

 Score =  164 bits (416), Expect = 5e-39
 Identities = 72/125 (57%), Positives = 97/125 (77%)
 Frame = -1

Query: 377 RNLRHEAVKYKKGSLILGPAAHRDPRKLNLGLEKALEFYYWVETQFGFQHNELTCREMAI 198
           RNL  E+ + +   L+LGP A+ DP+K+++GL+KALEF++W+ET FGF HNE+TCR+MA 
Sbjct: 76  RNLSDESQRRRSEVLVLGPGAYMDPKKVSIGLQKALEFFFWIETHFGFDHNEITCRDMAC 135

Query: 197 VLVKGNRMNLFWDFLKNMSGRYKKVNLVTTATMTCLIKALGEEGLVNEALSAFYRMKQFH 18
           +L KGN     WDFL+ +S R    N+VTTA++TCL+K LGEEG V EAL+ FYRMK++H
Sbjct: 136 LLAKGNDFKGLWDFLRQVSRRENGKNVVTTASITCLMKCLGEEGFVKEALATFYRMKEYH 195

Query: 17  CKPDV 3
           CKPDV
Sbjct: 196 CKPDV 200


>ref|XP_002887681.1| binding protein [Arabidopsis lyrata subsp. lyrata]
           gi|297333522|gb|EFH63940.1| binding protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 459

 Score =  162 bits (409), Expect = 3e-38
 Identities = 72/125 (57%), Positives = 96/125 (76%)
 Frame = -1

Query: 377 RNLRHEAVKYKKGSLILGPAAHRDPRKLNLGLEKALEFYYWVETQFGFQHNELTCREMAI 198
           RNL  E+ + +   L+LGP A+ DP+K++LGL+KALEF++W+E  FGF HNE+TCR+MA 
Sbjct: 76  RNLSDESQRRRSEVLVLGPGAYIDPKKISLGLQKALEFFFWIEIHFGFGHNEITCRDMAC 135

Query: 197 VLVKGNRMNLFWDFLKNMSGRYKKVNLVTTATMTCLIKALGEEGLVNEALSAFYRMKQFH 18
           +L KGN     WDFL+ +S R    N+VTTA++TCL+K LGEEG V EAL+ FYRMK++H
Sbjct: 136 LLAKGNDFKGLWDFLRQVSRRENGKNVVTTASITCLMKCLGEEGFVKEALATFYRMKEYH 195

Query: 17  CKPDV 3
           CKPDV
Sbjct: 196 CKPDV 200


>ref|XP_002279168.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g77405-like [Vitis vinifera]
          Length = 432

 Score =  154 bits (389), Expect = 7e-36
 Identities = 75/125 (60%), Positives = 92/125 (73%)
 Frame = -1

Query: 377 RNLRHEAVKYKKGSLILGPAAHRDPRKLNLGLEKALEFYYWVETQFGFQHNELTCREMAI 198
           RNL  E  K+ +         +RDP K+ LG+EKA+EFY WVETQFGF HNE+TCREM  
Sbjct: 78  RNLYQEPNKFHR---------YRDPHKVKLGVEKAMEFYSWVETQFGFSHNEMTCREMGC 128

Query: 197 VLVKGNRMNLFWDFLKNMSGRYKKVNLVTTATMTCLIKALGEEGLVNEALSAFYRMKQFH 18
           VL +GNR+ + W+FL  M+ R     +VTTAT+TCL+K LGEEGL N+AL+AFYRMKQFH
Sbjct: 129 VLARGNRLKVLWEFLHEMA-RKGGNGVVTTATITCLMKVLGEEGLANQALAAFYRMKQFH 187

Query: 17  CKPDV 3
           CKPDV
Sbjct: 188 CKPDV 192


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