BLASTX nr result

ID: Scutellaria23_contig00026115 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00026115
         (409 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004157453.1| PREDICTED: LOW QUALITY PROTEIN: H/ACA ribonu...   163   2e-38
ref|XP_004137598.1| PREDICTED: H/ACA ribonucleoprotein complex s...   163   2e-38
emb|CBI30568.3| unnamed protein product [Vitis vinifera]              159   3e-37
ref|XP_002270073.1| PREDICTED: H/ACA ribonucleoprotein complex s...   159   3e-37
ref|XP_003545704.1| PREDICTED: H/ACA ribonucleoprotein complex s...   158   5e-37

>ref|XP_004157453.1| PREDICTED: LOW QUALITY PROTEIN: H/ACA ribonucleoprotein complex
           subunit 4-like [Cucumis sativus]
          Length = 566

 Score =  163 bits (412), Expect = 2e-38
 Identities = 74/80 (92%), Positives = 78/80 (97%)
 Frame = +1

Query: 169 DFQIKPQSFTPPVDTSQWPILLKNYDKLNVRTGHYTPLPAGYSPLKRPLAEYIKYGVLNL 348
           DF IKPQSFTPPVDTSQWPILLKNYD+LNVRTGHYTPLP+GY PLKRPLAEYI+YG+LNL
Sbjct: 23  DFMIKPQSFTPPVDTSQWPILLKNYDRLNVRTGHYTPLPSGYLPLKRPLAEYIRYGILNL 82

Query: 349 DKPANPSSHEVVAWIKRILR 408
           DKPANPSSHEVVAWIKRILR
Sbjct: 83  DKPANPSSHEVVAWIKRILR 102


>ref|XP_004137598.1| PREDICTED: H/ACA ribonucleoprotein complex subunit 4-like, partial
           [Cucumis sativus]
          Length = 564

 Score =  163 bits (412), Expect = 2e-38
 Identities = 74/80 (92%), Positives = 78/80 (97%)
 Frame = +1

Query: 169 DFQIKPQSFTPPVDTSQWPILLKNYDKLNVRTGHYTPLPAGYSPLKRPLAEYIKYGVLNL 348
           DF IKPQSFTPPVDTSQWPILLKNYD+LNVRTGHYTPLP+GY PLKRPLAEYI+YG+LNL
Sbjct: 23  DFMIKPQSFTPPVDTSQWPILLKNYDRLNVRTGHYTPLPSGYLPLKRPLAEYIRYGILNL 82

Query: 349 DKPANPSSHEVVAWIKRILR 408
           DKPANPSSHEVVAWIKRILR
Sbjct: 83  DKPANPSSHEVVAWIKRILR 102


>emb|CBI30568.3| unnamed protein product [Vitis vinifera]
          Length = 476

 Score =  159 bits (401), Expect = 3e-37
 Identities = 72/80 (90%), Positives = 78/80 (97%)
 Frame = +1

Query: 169 DFQIKPQSFTPPVDTSQWPILLKNYDKLNVRTGHYTPLPAGYSPLKRPLAEYIKYGVLNL 348
           +F IKPQSFTP +DTSQWPILLKNYD+LNVRTGHYTPLP+GYSPLKRPLAEYI+YG+LNL
Sbjct: 38  EFLIKPQSFTPSLDTSQWPILLKNYDRLNVRTGHYTPLPSGYSPLKRPLAEYIRYGILNL 97

Query: 349 DKPANPSSHEVVAWIKRILR 408
           DKPANPSSHEVVAWIKRILR
Sbjct: 98  DKPANPSSHEVVAWIKRILR 117


>ref|XP_002270073.1| PREDICTED: H/ACA ribonucleoprotein complex subunit 4 [Vitis
           vinifera]
          Length = 586

 Score =  159 bits (401), Expect = 3e-37
 Identities = 72/80 (90%), Positives = 78/80 (97%)
 Frame = +1

Query: 169 DFQIKPQSFTPPVDTSQWPILLKNYDKLNVRTGHYTPLPAGYSPLKRPLAEYIKYGVLNL 348
           +F IKPQSFTP +DTSQWPILLKNYD+LNVRTGHYTPLP+GYSPLKRPLAEYI+YG+LNL
Sbjct: 38  EFLIKPQSFTPSLDTSQWPILLKNYDRLNVRTGHYTPLPSGYSPLKRPLAEYIRYGILNL 97

Query: 349 DKPANPSSHEVVAWIKRILR 408
           DKPANPSSHEVVAWIKRILR
Sbjct: 98  DKPANPSSHEVVAWIKRILR 117


>ref|XP_003545704.1| PREDICTED: H/ACA ribonucleoprotein complex subunit 4-like [Glycine
           max]
          Length = 589

 Score =  158 bits (399), Expect = 5e-37
 Identities = 70/77 (90%), Positives = 77/77 (100%)
 Frame = +1

Query: 178 IKPQSFTPPVDTSQWPILLKNYDKLNVRTGHYTPLPAGYSPLKRPLAEYIKYGVLNLDKP 357
           IKPQSFTPP+DTSQWPILLKNY++LNVRTGHYTP+P+GYSPLKRPLAEY+KYGVLNLDKP
Sbjct: 35  IKPQSFTPPIDTSQWPILLKNYERLNVRTGHYTPIPSGYSPLKRPLAEYLKYGVLNLDKP 94

Query: 358 ANPSSHEVVAWIKRILR 408
           ANPSSHEVVAWIKR+LR
Sbjct: 95  ANPSSHEVVAWIKRLLR 111


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