BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00026034
         (344 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003517644.1| PREDICTED: probable RNA-dependent RNA polyme...   141   6e-32
ref|NP_179583.3| RNA-dependent RNA polymerase-like protein [Arab...   136   2e-30
ref|XP_002883963.1| RNA-dependent RNA polymerase family protein ...   135   3e-30
emb|CBI28010.3| unnamed protein product [Vitis vinifera]              132   2e-29
ref|XP_002280491.1| PREDICTED: probable RNA-dependent RNA polyme...   132   2e-29

>ref|XP_003517644.1| PREDICTED: probable RNA-dependent RNA polymerase 5-like [Glycine
           max]
          Length = 953

 Score =  141 bits (355), Expect = 6e-32
 Identities = 71/114 (62%), Positives = 91/114 (79%)
 Frame = +3

Query: 3   LLMQCRLFHDGYAVKGTLLLNRKLSPGTIQIRPSMIKVAKDQSLTLETKECFNSLEIVTT 182
           LL+QCRLFH G+A+KGTLL+NRKL P TIQ+RPSMIKV KD S+ +++    NSLE+VTT
Sbjct: 412 LLIQCRLFHMGHAIKGTLLVNRKLPPRTIQVRPSMIKVEKDPSVHMQS---INSLEVVTT 468

Query: 183 SKRPGRNCLSKYLIALLSYGGVPQEFFLNLLTKALEETRNVYSNTRAALRVASN 344
           S +P R  LSK+LIALLS+GGVP EFF++LL   +E+  +VYSN R+ALR + N
Sbjct: 469 SNKPKRGYLSKHLIALLSFGGVPNEFFMDLLRSNMEDANHVYSNKRSALRASIN 522


>ref|NP_179583.3| RNA-dependent RNA polymerase-like protein [Arabidopsis thaliana]
           gi|322967572|sp|O82188.2|RDR5_ARATH RecName:
           Full=Probable RNA-dependent RNA polymerase 5;
           Short=AtRDRP5; AltName: Full=RNA-directed RNA polymerase
           5 gi|330251850|gb|AEC06944.1| RNA-dependent RNA
           polymerase-like protein [Arabidopsis thaliana]
          Length = 977

 Score =  136 bits (342), Expect = 2e-30
 Identities = 69/114 (60%), Positives = 88/114 (77%)
 Frame = +3

Query: 3   LLMQCRLFHDGYAVKGTLLLNRKLSPGTIQIRPSMIKVAKDQSLTLETKECFNSLEIVTT 182
           LL+Q R+F+DGYAVKGT LLN+KL P T+Q+RPSMIKV+KD SL+      FN+LE+VTT
Sbjct: 438 LLIQFRMFYDGYAVKGTFLLNKKLCPRTVQVRPSMIKVSKDPSLS--NFSTFNALEVVTT 495

Query: 183 SKRPGRNCLSKYLIALLSYGGVPQEFFLNLLTKALEETRNVYSNTRAALRVASN 344
           S  P R  LSK L+ALLSYGG+P EFFL++L   LEE+++++ N RAAL  A N
Sbjct: 496 SNPPKRTKLSKNLVALLSYGGIPNEFFLDILLNTLEESKSIFYNKRAALNAALN 549


>ref|XP_002883963.1| RNA-dependent RNA polymerase family protein [Arabidopsis lyrata
           subsp. lyrata] gi|297329803|gb|EFH60222.1| RNA-dependent
           RNA polymerase family protein [Arabidopsis lyrata subsp.
           lyrata]
          Length = 981

 Score =  135 bits (341), Expect = 3e-30
 Identities = 69/114 (60%), Positives = 88/114 (77%)
 Frame = +3

Query: 3   LLMQCRLFHDGYAVKGTLLLNRKLSPGTIQIRPSMIKVAKDQSLTLETKECFNSLEIVTT 182
           LL+Q R+F+DGYAVKGT LLN+KL P T+Q+RPSMIKV+KD SL+      FN+LE+VTT
Sbjct: 442 LLIQFRMFYDGYAVKGTFLLNKKLCPRTVQVRPSMIKVSKDPSLS--NFSTFNALEVVTT 499

Query: 183 SKRPGRNCLSKYLIALLSYGGVPQEFFLNLLTKALEETRNVYSNTRAALRVASN 344
           S  P R  LSK L+ALLSYGG+P EFFL++L   LEE+++++ N  AAL VA N
Sbjct: 500 SNPPRRTKLSKNLVALLSYGGIPNEFFLDILLNTLEESKSIFYNKHAALNVALN 553


>emb|CBI28010.3| unnamed protein product [Vitis vinifera]
          Length = 929

 Score =  132 bits (333), Expect = 2e-29
 Identities = 73/112 (65%), Positives = 87/112 (77%)
 Frame = +3

Query: 3   LLMQCRLFHDGYAVKGTLLLNRKLSPGTIQIRPSMIKVAKDQSLTLETKECFNSLEIVTT 182
           LL+QCRLF++G AVKGTLLLNRKL P TIQIRPSMIKV  D  L+    +  NS+EI  T
Sbjct: 389 LLIQCRLFNNGCAVKGTLLLNRKLPPRTIQIRPSMIKVETDPKLS--DTQTVNSVEINGT 446

Query: 183 SKRPGRNCLSKYLIALLSYGGVPQEFFLNLLTKALEETRNVYSNTRAALRVA 338
           S +P R+ LSKYLIALLSYGGVP E+F+NLL  ALE+  +V S+ RAALRV+
Sbjct: 447 SNQPRRSYLSKYLIALLSYGGVPNEYFMNLLKDALEDAPSVQSSKRAALRVS 498


>ref|XP_002280491.1| PREDICTED: probable RNA-dependent RNA polymerase 5-like [Vitis
           vinifera]
          Length = 943

 Score =  132 bits (333), Expect = 2e-29
 Identities = 73/112 (65%), Positives = 87/112 (77%)
 Frame = +3

Query: 3   LLMQCRLFHDGYAVKGTLLLNRKLSPGTIQIRPSMIKVAKDQSLTLETKECFNSLEIVTT 182
           LL+QCRLF++G AVKGTLLLNRKL P TIQIRPSMIKV  D  L+    +  NS+EI  T
Sbjct: 403 LLIQCRLFNNGCAVKGTLLLNRKLPPRTIQIRPSMIKVETDPKLS--DTQTVNSVEINGT 460

Query: 183 SKRPGRNCLSKYLIALLSYGGVPQEFFLNLLTKALEETRNVYSNTRAALRVA 338
           S +P R+ LSKYLIALLSYGGVP E+F+NLL  ALE+  +V S+ RAALRV+
Sbjct: 461 SNQPRRSYLSKYLIALLSYGGVPNEYFMNLLKDALEDAPSVQSSKRAALRVS 512