BLASTX nr result

ID: Scutellaria23_contig00025452 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00025452
         (766 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003635004.1| PREDICTED: putative F-box/LRR-repeat protein...    57   3e-06
ref|XP_002300142.1| f-box family protein [Populus trichocarpa] g...    57   4e-06

>ref|XP_003635004.1| PREDICTED: putative F-box/LRR-repeat protein At5g02930-like [Vitis
           vinifera]
          Length = 610

 Score = 57.4 bits (137), Expect = 3e-06
 Identities = 62/239 (25%), Positives = 118/239 (49%), Gaps = 18/239 (7%)
 Frame = +1

Query: 19  NLTIRSTSLKEFRIEKYVDLNAVYVDLIEKGTILTIWAPNLVDLQILGWLYSQYL-LTDV 195
           +L I S SLK+  I +Y D +  +       ++L I APN+  L ILG +Y++   + +V
Sbjct: 265 SLNITSASLKKLVINRYWDSSHSH-----HRSVLKISAPNVQSLGILGNMYTKECRVKNV 319

Query: 196 SSLSNVALHXXXXXXXXXXQ----LRQEMMIRLLQSIHHAKTLTLSPWCLQILGRMKSEG 363
            SL + +L+          +    L  +++++LL+S++H K LT+  WC+Q+L   + + 
Sbjct: 320 PSLFDASLNFELAMQEGNPKDHYKLYHKVVMKLLKSVNHVKALTVGTWCIQVLSIFEGKD 379

Query: 364 V--FLPSTDATFLNLHGS--ELNKIVDVLEMFPKLRFLVLKLDDPRLYQGLKEMCEKWSI 531
           +   L +     L+ H +  +L  I ++L+    L   V+ +  P   Q   E+   ++ 
Sbjct: 380 LSSLLSNLKCLILDTHLNKWDLPGIANLLQSSTHLETFVINMISPCSQQISVEVGFSFTD 439

Query: 532 EYNNSFEYTPNSSE-----FLVQLRRVEITWIDNDEP-IDL---FIEFLSKYGCNLEEI 681
            +N   E   +S E      L+ L+ V+I  +  ++P I+L    ++FL K    LE++
Sbjct: 440 LHNFDEEKYWSSREGVLANSLINLKTVKIIGVIWNQPGIELVFGLVKFLLKNARMLEKV 498


>ref|XP_002300142.1| f-box family protein [Populus trichocarpa]
           gi|222847400|gb|EEE84947.1| f-box family protein
           [Populus trichocarpa]
          Length = 481

 Score = 57.0 bits (136), Expect = 4e-06
 Identities = 36/132 (27%), Positives = 69/132 (52%), Gaps = 11/132 (8%)
 Frame = +1

Query: 115 ILTIWAPNLVDLQILGWLY-SQYLLTDVSSLSNVALHXXXXXXXXXXQ-----LRQEMMI 276
           ++TI  PNL+ L + G+++ + Y+L DVSSL   ++           +       + ++ 
Sbjct: 266 VITIKGPNLLSLTLAGYMHRANYMLLDVSSLVEASIGYRMKSCSHGCRSNWYSAHRSVLH 325

Query: 277 RLLQSIHHAKTLTLSPWCLQILGRMKSEGVFLPSTDATFLNLHGSELNK-----IVDVLE 441
            LL+ + H + LT+  WCLQ+L   + +G+  P++   +L L+  ++NK     I  +L+
Sbjct: 326 DLLEKLQHVEKLTIGTWCLQVLSISEVKGLSSPTSACKYLTLN-KKINKWDLPGIASLLQ 384

Query: 442 MFPKLRFLVLKL 477
             P L+ L + L
Sbjct: 385 SSPNLQKLTINL 396


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