BLASTX nr result

ID: Scutellaria23_contig00025432 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00025432
         (301 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAJ53188.1| JMS09K11.6 [Jatropha curcas]                           71   1e-10
ref|XP_002520311.1| topbp1, putative [Ricinus communis] gi|22354...    69   5e-10
ref|XP_002284611.2| PREDICTED: DNA topoisomerase 2-binding prote...    60   1e-07
gb|AAG29194.1|AC078898_4 hypothetical protein [Arabidopsis thali...    57   2e-06
emb|CAD54082.1| MEI1 protein [Arabidopsis thaliana]                    57   2e-06

>dbj|BAJ53188.1| JMS09K11.6 [Jatropha curcas]
          Length = 918

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 43/95 (45%), Positives = 59/95 (62%), Gaps = 1/95 (1%)
 Frame = +3

Query: 18  QCTLSSMPSASDLETKISTHDIKPVDHDSLFPSIAHTFPEVPPISEEG-KEPSAVNLEKD 194
           +CT +S+  AS   T+    D  P    +L  +++  F + P   +EG K+  AV+   +
Sbjct: 260 KCTATSLSVASSRATESGFSD--PDLEATLSQNMSSMFSDPPIFMKEGDKQMPAVHPINE 317

Query: 195 SDFARCIANDSQSEDDDLYLSECRILLVGFEASEL 299
           ++   C+ANDSQSED DLYLSECRI LVGFEASEL
Sbjct: 318 TNLDVCVANDSQSEDSDLYLSECRISLVGFEASEL 352


>ref|XP_002520311.1| topbp1, putative [Ricinus communis] gi|223540530|gb|EEF42097.1|
           topbp1, putative [Ricinus communis]
          Length = 950

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 42/94 (44%), Positives = 56/94 (59%), Gaps = 5/94 (5%)
 Frame = +3

Query: 33  SMPSASDLETKISTHDIKPVDHDSLFPSIAHTFPEV---PPIS--EEGKEPSAVNLEKDS 197
           S+PSA+  E+ +       V    L P+++     +   PP+S  E   E  AV+   ++
Sbjct: 261 SVPSAAPAESNLPGLPGAGVSDLDLEPTLSQNMSSMFSDPPVSVKEWDNEVPAVHPTNET 320

Query: 198 DFARCIANDSQSEDDDLYLSECRILLVGFEASEL 299
           +   C+ANDSQSED DLYLSECRI LVGFEASEL
Sbjct: 321 NLDGCVANDSQSEDSDLYLSECRISLVGFEASEL 354


>ref|XP_002284611.2| PREDICTED: DNA topoisomerase 2-binding protein 1-B-like [Vitis
           vinifera]
          Length = 962

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 37/98 (37%), Positives = 56/98 (57%), Gaps = 1/98 (1%)
 Frame = +3

Query: 9   ISSQCTLSSMPSASDLETKISTHDIKPVDHDSLFPSIAHTFPEVPPISEEGKEPSAVNLE 188
           ++ Q   SS+ + S+L+    +    P    +L  +   TF + P   +EG+       +
Sbjct: 263 VNFQSASSSLAADSNLQAVPCSGIGDPDLEATLSQNTCSTFLDAPIFIKEGETREPAMQD 322

Query: 189 KDSD-FARCIANDSQSEDDDLYLSECRILLVGFEASEL 299
           KD +     +A+DSQ+ED DLYLS+CRILLVGFEASE+
Sbjct: 323 KDENKLDGLVADDSQTEDSDLYLSDCRILLVGFEASEM 360


>gb|AAG29194.1|AC078898_4 hypothetical protein [Arabidopsis thaliana]
          Length = 783

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 33/74 (44%), Positives = 47/74 (63%)
 Frame = +3

Query: 78  DIKPVDHDSLFPSIAHTFPEVPPISEEGKEPSAVNLEKDSDFARCIANDSQSEDDDLYLS 257
           DI+     ++FP+  +   +V    E G  P+A   E++ D   C A DS+SED+DLYLS
Sbjct: 279 DIEASASQNVFPTSMNPSTDV---KEPGGGPTARPQEQNID--GCTARDSESEDNDLYLS 333

Query: 258 ECRILLVGFEASEL 299
           +CRI L+GFEASE+
Sbjct: 334 DCRIFLLGFEASEM 347


>emb|CAD54082.1| MEI1 protein [Arabidopsis thaliana]
          Length = 972

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 33/74 (44%), Positives = 47/74 (63%)
 Frame = +3

Query: 78  DIKPVDHDSLFPSIAHTFPEVPPISEEGKEPSAVNLEKDSDFARCIANDSQSEDDDLYLS 257
           DI+     ++FP+  +   +V    E G  P+A   E++ D   C A DS+SED+DLYLS
Sbjct: 313 DIEASASQNVFPTSMNPSTDV---KEPGGGPTARPQEQNID--GCTARDSESEDNDLYLS 367

Query: 258 ECRILLVGFEASEL 299
           +CRI L+GFEASE+
Sbjct: 368 DCRIFLLGFEASEM 381


Top