BLASTX nr result

ID: Scutellaria23_contig00025314 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00025314
         (713 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002298050.1| predicted protein [Populus trichocarpa] gi|2...    80   5e-13
ref|XP_002509758.1| dead box ATP-dependent RNA helicase, putativ...    75   1e-11
ref|XP_002304481.1| predicted protein [Populus trichocarpa] gi|2...    70   6e-10
ref|XP_002276972.2| PREDICTED: probable DEAD-box ATP-dependent R...    70   6e-10
ref|XP_004143987.1| PREDICTED: putative DEAD-box ATP-dependent R...    66   6e-09

>ref|XP_002298050.1| predicted protein [Populus trichocarpa] gi|222845308|gb|EEE82855.1|
           predicted protein [Populus trichocarpa]
          Length = 784

 Score = 79.7 bits (195), Expect = 5e-13
 Identities = 80/241 (33%), Positives = 99/241 (41%), Gaps = 10/241 (4%)
 Frame = -3

Query: 711 LTPQEHIKALADRFMKEGAEDLWNENDGPSGVPV-SRPG------RSSITGEPLNLQKLV 553
           ++P+EHIKALADRFMKEGAEDLWNE DGP   P   RPG      R      PL+L+KL+
Sbjct: 94  MSPKEHIKALADRFMKEGAEDLWNEMDGPLKAPSDERPGFVGTNQRPGSINSPLDLRKLM 153

Query: 552 SERSSLSGVDKIEKIN---FLSNVSSGVATPRHFSTYTSRTGCLMGDHGNEYLRTMSNGF 382
           SE  ++S   +    N   F  N SS       +     +      D GNE         
Sbjct: 154 SEGRNVSRHREENGFNYRKFRINESSSSDDDEDYGFVNDKVMNFGRDSGNER-------- 205

Query: 381 YLVGNSRRVMLTGLSNFLNLNCYYSVDPGSIMHKRLNFAKNGQVSVVNDGLNTKERSESG 202
             V NSR V     S F+        + G    K+  F +N  V +              
Sbjct: 206 GAVSNSRNV-----SEFMK-------NKGFETQKQRRFGRNESVDL-------------- 239

Query: 201 KTAKWPRFQGGKMXXXXXXXXXXXXDGEELQSKGKILSSSAALGKYDVKITKRRVPLERL 22
                   +GG               GE      K + S  ALGKYDVK T RRVP + L
Sbjct: 240 --------EGG---------------GERRGRSAKEIGSRDALGKYDVKKT-RRVPSKEL 275

Query: 21  E 19
           E
Sbjct: 276 E 276


>ref|XP_002509758.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
           gi|223549657|gb|EEF51145.1| dead box ATP-dependent RNA
           helicase, putative [Ricinus communis]
          Length = 771

 Score = 75.1 bits (183), Expect = 1e-11
 Identities = 71/246 (28%), Positives = 99/246 (40%), Gaps = 12/246 (4%)
 Frame = -3

Query: 708 TPQEHIKALADRFMKEGAEDLWNENDGP--SGVPVSRPGRSSI--------TGEPLNLQK 559
           +P++HIKALADRFMKEGAEDLWNE+DGP  S +P S     SI           P++L+K
Sbjct: 96  SPKDHIKALADRFMKEGAEDLWNEDDGPLTSQLPKSNQRSGSIGSNQRPGSINTPIDLRK 155

Query: 558 LVSERSSLSGVDKIEKINFLSNVSSGVATPRHFSTYTSRTGCLMGDHGNEYLRTMSNGFY 379
           ++ E  S         ++   N+S      R +S  +   G    +  +   +       
Sbjct: 156 VMLEARS---------VHNFENLSYNYTKTREYSVNSFNLGQKQSNESDNLKKR------ 200

Query: 378 LVGNSRRVMLTGLSNFLNLNCYYSVDPGSIMHKRLNFAKNGQVSVVNDGLN--TKERSES 205
                                      G I  K   F +N   S  +DG      ER + 
Sbjct: 201 ---------------------------GLISQKVRRFRRNESSSGEDDGDYDCDNEREKK 233

Query: 204 GKTAKWPRFQGGKMXXXXXXXXXXXXDGEELQSKGKILSSSAALGKYDVKITKRRVPLER 25
           G+  +                              +I+ S AALGKYDVKI+K RVPL+ 
Sbjct: 234 GRNVR------------------------------EIIGSRAALGKYDVKISK-RVPLKE 262

Query: 24  LEDEID 7
           LE+E D
Sbjct: 263 LEEETD 268


>ref|XP_002304481.1| predicted protein [Populus trichocarpa] gi|222841913|gb|EEE79460.1|
           predicted protein [Populus trichocarpa]
          Length = 798

 Score = 69.7 bits (169), Expect = 6e-10
 Identities = 75/241 (31%), Positives = 101/241 (41%), Gaps = 10/241 (4%)
 Frame = -3

Query: 711 LTPQEHIKALADRFMKEGAEDLWNENDG----PSGVPVSRPGRSSITG---EPLNLQKLV 553
           ++P EH+KALADRFMK+GAEDLWNENDG    PS       G +   G    P++L+KL+
Sbjct: 94  MSPNEHLKALADRFMKDGAEDLWNENDGSLKPPSDEQTEFVGTNQQPGSIHSPVDLRKLI 153

Query: 552 SERSSLSGVDKIEKINFLSNVSSG---VATPRHFSTYTSRTGCLMGDHGNEYLRTMSNGF 382
           SE         +  + F S   S        R F    S +     DHG  ++      F
Sbjct: 154 SE----GHYSMLRDLGFESGGDSTKPLARRQRKFRINESSSSDDDEDHG--FVNDKVKNF 207

Query: 381 YLVGNSRRVMLTGLSNFLNLNCYYSVDPGSIMHKRLNFAKNGQVSVVNDGLNTKERSESG 202
             VG+S      G+SN  N++               +F KN                   
Sbjct: 208 --VGDSWNER-GGVSNLRNVS---------------DFMKN----------------RGS 233

Query: 201 KTAKWPRFQGGKMXXXXXXXXXXXXDGEELQSKGKILSSSAALGKYDVKITKRRVPLERL 22
           +T K  RFQ  +              G+        + S AALGKYD+K T RRVPL+ L
Sbjct: 234 ETVKQRRFQRNE---SDDEDEDLEGGGDRRGRSATDIGSRAALGKYDMKKT-RRVPLKEL 289

Query: 21  E 19
           +
Sbjct: 290 D 290


>ref|XP_002276972.2| PREDICTED: probable DEAD-box ATP-dependent RNA helicase 48-like
           [Vitis vinifera] gi|297742558|emb|CBI34707.3| unnamed
           protein product [Vitis vinifera]
          Length = 754

 Score = 69.7 bits (169), Expect = 6e-10
 Identities = 41/95 (43%), Positives = 53/95 (55%), Gaps = 5/95 (5%)
 Frame = -3

Query: 711 LTPQEHIKALADRFMKEGAEDLWNENDGPSGVPVSRP-----GRSSITGEPLNLQKLVSE 547
           ++PQ+HIKALADRFMKEGAEDLWN++DGP   P   P     G S     P++L+KL S 
Sbjct: 97  MSPQDHIKALADRFMKEGAEDLWNDDDGPVKSPPLLPRRPSNGLSRQIEPPVDLRKLTSH 156

Query: 546 RSSLSGVDKIEKINFLSNVSSGVATPRHFSTYTSR 442
             SL   +        + + S    PRH+S    R
Sbjct: 157 GRSLGPGN--------ARIVSRALKPRHYSVQVRR 183


>ref|XP_004143987.1| PREDICTED: putative DEAD-box ATP-dependent RNA helicase 33-like
           [Cucumis sativus] gi|449495891|ref|XP_004159976.1|
           PREDICTED: putative DEAD-box ATP-dependent RNA helicase
           33-like [Cucumis sativus]
          Length = 813

 Score = 66.2 bits (160), Expect = 6e-09
 Identities = 71/260 (27%), Positives = 115/260 (44%), Gaps = 24/260 (9%)
 Frame = -3

Query: 708 TPQEHIKALADRFMKEGAEDLWNENDGPSGVPVSRPG-------------RSSITGEPLN 568
           +P EHI  LA+RFMK+GA DLWNE+DGP   P+ RP              RS     P++
Sbjct: 98  SPSEHINDLANRFMKQGAIDLWNEDDGPLKTPLPRPAALNEGSRRIASNVRSGSIRSPID 157

Query: 567 LQKLVSER------SSLSGVDKIEKINFLSNVSSGVATPRHFSTYTSRTGCLMGDH--GN 412
           +++L++E       S   G++     + +   S  V + R F    S +     D+  G 
Sbjct: 158 VKRLLAENHDGFVGSHYMGLNG----DNVKGRSYSVQSRRSFRRNESSSSDDDMDYNSGV 213

Query: 411 EYLRTMSNGFYLV--GNSRRVMLTGLSNFLNLNCYYSVDPGSIMHKRLNFAKNGQVSVVN 238
           + ++  +N        N++   L G+SN          D  ++  +++ F +NG +S  +
Sbjct: 214 DSIKPFANKLARSPDRNAKSRNLNGISN----------DRKAVPQRKMKFWRNGSLSSDD 263

Query: 237 DGLNTKERSESGKTAKWPRFQGGKMXXXXXXXXXXXXDGEELQS-KGKILSSSAALGKYD 61
           D        E G   K                        +L+S KG    SSA+LGK D
Sbjct: 264 D-----SEEEFGNVDK------------------------DLRSWKGLKTGSSASLGKCD 294

Query: 60  VKITKRRVPLERLEDEIDLS 1
           V++ K+RVPL+  ++E D +
Sbjct: 295 VRM-KKRVPLKPFDEESDFA 313


Top