BLASTX nr result

ID: Scutellaria23_contig00025301 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00025301
         (403 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK38216.1| unknown [Lotus japonicus]                              135   6e-37
ref|XP_002518614.1| Charged multivesicular body protein, putativ...   131   3e-36
ref|XP_004135046.1| PREDICTED: charged multivesicular body prote...   132   4e-36
ref|XP_002316482.1| predicted protein [Populus trichocarpa] gi|2...   130   6e-36
ref|NP_187675.2| charged multivesicular body protein 5 [Arabidop...   131   6e-36

>gb|AFK38216.1| unknown [Lotus japonicus]
          Length = 237

 Score =  135 bits (339), Expect(2) = 6e-37
 Identities = 70/85 (82%), Positives = 75/85 (88%), Gaps = 3/85 (3%)
 Frame = +3

Query: 3   SDRINKRGDNVEEKIKKLDVELTRFKEQIKRTRAGPAQEAVKARAMRILKQKRIYEAQRD 182
           SDRI KRGD+VEEKIKKLD ELTR+KEQIK+TR GPAQEAVKARAMR+LKQKR+YE QRD
Sbjct: 21  SDRITKRGDSVEEKIKKLDAELTRYKEQIKKTRPGPAQEAVKARAMRVLKQKRMYEGQRD 80

Query: 183 TLYNQTSKLDQ---AAEGIKDAQQT 248
            LYNQT  LDQ   AAEGIKDAQQT
Sbjct: 81  MLYNQTFNLDQVQFAAEGIKDAQQT 105



 Score = 44.3 bits (103), Expect(2) = 6e-37
 Identities = 20/24 (83%), Positives = 23/24 (95%)
 Frame = +2

Query: 332 ISALKSGNKELKGMMKTVKVQDID 403
           ++ALKS NKELKGMMKTVK+QDID
Sbjct: 106 MTALKSANKELKGMMKTVKIQDID 129


>ref|XP_002518614.1| Charged multivesicular body protein, putative [Ricinus communis]
           gi|223542213|gb|EEF43756.1| Charged multivesicular body
           protein, putative [Ricinus communis]
          Length = 237

 Score =  131 bits (330), Expect(2) = 3e-36
 Identities = 66/85 (77%), Positives = 76/85 (89%), Gaps = 3/85 (3%)
 Frame = +3

Query: 3   SDRINKRGDNVEEKIKKLDVELTRFKEQIKRTRAGPAQEAVKARAMRILKQKRIYEAQRD 182
           SDRINK+GD+V++KIKKLD ELTR++EQIK+TR GPAQEAVKARAMR+LKQKR+YE QRD
Sbjct: 21  SDRINKKGDSVDDKIKKLDAELTRYREQIKKTRPGPAQEAVKARAMRVLKQKRMYEGQRD 80

Query: 183 TLYNQTSKLDQ---AAEGIKDAQQT 248
            LYNQT  LDQ   A+EGIKDAQQT
Sbjct: 81  MLYNQTFNLDQVAFASEGIKDAQQT 105



 Score = 45.4 bits (106), Expect(2) = 3e-36
 Identities = 21/24 (87%), Positives = 23/24 (95%)
 Frame = +2

Query: 332 ISALKSGNKELKGMMKTVKVQDID 403
           +SALKS NKELKGMMKTVK+QDID
Sbjct: 106 MSALKSANKELKGMMKTVKIQDID 129


>ref|XP_004135046.1| PREDICTED: charged multivesicular body protein 5-like [Cucumis
           sativus] gi|449522013|ref|XP_004168023.1| PREDICTED:
           charged multivesicular body protein 5-like [Cucumis
           sativus]
          Length = 237

 Score =  132 bits (332), Expect(2) = 4e-36
 Identities = 67/85 (78%), Positives = 77/85 (90%), Gaps = 3/85 (3%)
 Frame = +3

Query: 3   SDRINKRGDNVEEKIKKLDVELTRFKEQIKRTRAGPAQEAVKARAMRILKQKRIYEAQRD 182
           SDRINKRG++V++KIKKLDVEL+R+KEQIK+TR GPAQEAVKARAMR+LKQKR+YE QRD
Sbjct: 21  SDRINKRGESVDDKIKKLDVELSRYKEQIKKTRPGPAQEAVKARAMRVLKQKRMYEGQRD 80

Query: 183 TLYNQTSKLDQ---AAEGIKDAQQT 248
            LYNQT  LDQ   A+EGIKDAQQT
Sbjct: 81  MLYNQTFNLDQVAFASEGIKDAQQT 105



 Score = 44.3 bits (103), Expect(2) = 4e-36
 Identities = 20/24 (83%), Positives = 23/24 (95%)
 Frame = +2

Query: 332 ISALKSGNKELKGMMKTVKVQDID 403
           +SALKS NKELKGMMKTV++QDID
Sbjct: 106 MSALKSANKELKGMMKTVRIQDID 129


>ref|XP_002316482.1| predicted protein [Populus trichocarpa] gi|222865522|gb|EEF02653.1|
           predicted protein [Populus trichocarpa]
          Length = 236

 Score =  130 bits (327), Expect(2) = 6e-36
 Identities = 67/85 (78%), Positives = 74/85 (87%), Gaps = 3/85 (3%)
 Frame = +3

Query: 3   SDRINKRGDNVEEKIKKLDVELTRFKEQIKRTRAGPAQEAVKARAMRILKQKRIYEAQRD 182
           S++INKRGD V+EKIKKLD EL R+KEQIK+TR GPAQEAVKARAMRILKQKR+YE QRD
Sbjct: 21  SEKINKRGDTVDEKIKKLDAELARYKEQIKKTRPGPAQEAVKARAMRILKQKRMYEGQRD 80

Query: 183 TLYNQTSKLDQ---AAEGIKDAQQT 248
            LYNQT  LDQ   A+EGIKDAQQT
Sbjct: 81  MLYNQTYNLDQVAFASEGIKDAQQT 105



 Score = 45.4 bits (106), Expect(2) = 6e-36
 Identities = 21/24 (87%), Positives = 23/24 (95%)
 Frame = +2

Query: 332 ISALKSGNKELKGMMKTVKVQDID 403
           +SALKS NKELKGMMKTVK+QDID
Sbjct: 106 MSALKSANKELKGMMKTVKIQDID 129


>ref|NP_187675.2| charged multivesicular body protein 5 [Arabidopsis thaliana]
           gi|8567798|gb|AAF76370.1| unknown protein [Arabidopsis
           thaliana] gi|29028830|gb|AAO64794.1| At3g10640
           [Arabidopsis thaliana] gi|110736412|dbj|BAF00173.1|
           hypothetical protein [Arabidopsis thaliana]
           gi|332641416|gb|AEE74937.1| charged multivesicular body
           protein 5 [Arabidopsis thaliana]
          Length = 235

 Score =  131 bits (330), Expect(2) = 6e-36
 Identities = 66/85 (77%), Positives = 76/85 (89%), Gaps = 3/85 (3%)
 Frame = +3

Query: 3   SDRINKRGDNVEEKIKKLDVELTRFKEQIKRTRAGPAQEAVKARAMRILKQKRIYEAQRD 182
           SDRINKRGD+VE+KIKKLDVEL ++KEQ+K+TR GPAQEAVKARAMR+LKQK++YE QRD
Sbjct: 21  SDRINKRGDSVEDKIKKLDVELCKYKEQLKKTRPGPAQEAVKARAMRVLKQKKMYEGQRD 80

Query: 183 TLYNQTSKLDQ---AAEGIKDAQQT 248
            LYNQT  LDQ   AAEG+KDAQQT
Sbjct: 81  MLYNQTFNLDQVSFAAEGLKDAQQT 105



 Score = 44.3 bits (103), Expect(2) = 6e-36
 Identities = 20/24 (83%), Positives = 23/24 (95%)
 Frame = +2

Query: 332 ISALKSGNKELKGMMKTVKVQDID 403
           ++ALKS NKELKGMMKTVK+QDID
Sbjct: 106 MTALKSANKELKGMMKTVKIQDID 129


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