BLASTX nr result

ID: Scutellaria23_contig00025248 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00025248
         (202 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003588326.1| ATP synthase subunit alpha [Medicago truncat...   146   2e-33
ref|XP_003588337.1| Ribosomal protein S10 [Medicago truncatula] ...    64   1e-15
gb|AAS98481.1| hypothetical protein [Oryza sativa Japonica Group...    75   4e-12
ref|ZP_07053941.1| pG1 protein, partial [Listeria grayi DSM 2060...    67   1e-09
ref|XP_002435918.1| hypothetical protein IscW_ISCW024385 [Ixodes...    67   2e-09

>ref|XP_003588326.1| ATP synthase subunit alpha [Medicago truncatula]
            gi|355477374|gb|AES58577.1| ATP synthase subunit alpha
            [Medicago truncatula]
          Length = 1116

 Score =  146 bits (368), Expect = 2e-33
 Identities = 67/67 (100%), Positives = 67/67 (100%)
 Frame = +2

Query: 2    SYRGCWHGVSRGFFLESCHDRALDERALQAALPFFTHAILLDRAFAHCPRFPTAAPRGSP 181
            SYRGCWHGVSRGFFLESCHDRALDERALQAALPFFTHAILLDRAFAHCPRFPTAAPRGSP
Sbjct: 934  SYRGCWHGVSRGFFLESCHDRALDERALQAALPFFTHAILLDRAFAHCPRFPTAAPRGSP 993

Query: 182  GRVSVPV 202
            GRVSVPV
Sbjct: 994  GRVSVPV 1000


>ref|XP_003588337.1| Ribosomal protein S10 [Medicago truncatula]
           gi|355477385|gb|AES58588.1| Ribosomal protein S10
           [Medicago truncatula]
          Length = 1152

 Score = 64.3 bits (155), Expect(2) = 1e-15
 Identities = 30/35 (85%), Positives = 31/35 (88%)
 Frame = -2

Query: 201 TGTETRPGLPRGAAVGNLGQWAKARSSNIA*VKKG 97
           TGTETRPGLPRGAAVGNLGQWAKARSSNI  +  G
Sbjct: 173 TGTETRPGLPRGAAVGNLGQWAKARSSNICAIMTG 207



 Score = 43.5 bits (101), Expect(2) = 1e-15
 Identities = 21/22 (95%), Positives = 21/22 (95%)
 Frame = -1

Query: 67  CAIMTRLEEEAPANSVPAAAVR 2
           CAIMT LEEEAPANSVPAAAVR
Sbjct: 202 CAIMTGLEEEAPANSVPAAAVR 223


>gb|AAS98481.1| hypothetical protein [Oryza sativa Japonica Group]
           gi|51038047|gb|AAT93851.1| hypothetical protein [Oryza
           sativa Japonica Group]
          Length = 273

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 39/46 (84%), Positives = 39/46 (84%)
 Frame = +2

Query: 35  GFFLESCHDRALDERALQAALPFFTHAILLDRAFAHCPRFPTAAPR 172
           GFFLESCHDRALDERALQAALPFFTHAILLDRAFA      TA PR
Sbjct: 218 GFFLESCHDRALDERALQAALPFFTHAILLDRAFA--AGLVTATPR 261


>ref|ZP_07053941.1| pG1 protein, partial [Listeria grayi DSM 20601]
           gi|299816682|gb|EFI83919.1| pG1 protein [Listeria grayi
           DSM 20601]
          Length = 125

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 38/73 (52%), Positives = 43/73 (58%), Gaps = 7/73 (9%)
 Frame = +2

Query: 5   YRGCWHGVSRGFFL---ESCHDRALDERALQAAL----PFFTHAILLDRAFAHCPRFPTA 163
           YRGCWH VSRGF +   +     +    +L   L     FFTHA LL + F HC RFPTA
Sbjct: 32  YRGCWHVVSRGFLVRYRQGTSSYSYPCSSLTTVLYDPKTFFTHAALLRQTFVHCGRFPTA 91

Query: 164 APRGSPGRVSVPV 202
           A R S GRVSVPV
Sbjct: 92  ASRRSLGRVSVPV 104


>ref|XP_002435918.1| hypothetical protein IscW_ISCW024385 [Ixodes scapularis]
           gi|215499254|gb|EEC08748.1| hypothetical protein
           IscW_ISCW024385 [Ixodes scapularis]
          Length = 89

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 38/73 (52%), Positives = 42/73 (57%), Gaps = 7/73 (9%)
 Frame = +2

Query: 5   YRGCWHGVSRGFFLESCH-----DRALDERALQAALP--FFTHAILLDRAFAHCPRFPTA 163
           YRGCWH VSR F     H     D  +   A +   P  FFTHA  LD+ F HCP+FPTA
Sbjct: 5   YRGCWHIVSRCFLSRYRHPHYLLDSKISSLAKELYNPKAFFTHAEWLDQGFPHCPKFPTA 64

Query: 164 APRGSPGRVSVPV 202
           A R S  RVSVPV
Sbjct: 65  ASRRSLDRVSVPV 77


Top