BLASTX nr result

ID: Scutellaria23_contig00024891 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00024891
         (530 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003523507.1| PREDICTED: pentatricopeptide repeat-containi...   190   1e-46
ref|XP_004147057.1| PREDICTED: pentatricopeptide repeat-containi...   187   1e-45
ref|XP_003604017.1| Pentatricopeptide repeat-containing protein ...   185   4e-45
ref|XP_004158417.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...   184   5e-45
emb|CBI37965.3| unnamed protein product [Vitis vinifera]              140   1e-31

>ref|XP_003523507.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g12770-like [Glycine max]
          Length = 472

 Score =  190 bits (482), Expect = 1e-46
 Identities = 92/176 (52%), Positives = 129/176 (73%)
 Frame = +1

Query: 1   QEFYAHVLRAGLFFVSPNLQTNLVLTYTSCNNKNSLKTLTHFLKCLALKNPLPFNSIISH 180
           ++ +A +LR G+ F+S NL T L+ TY +C   N+L++L +F KC+   NPL FN+IIS 
Sbjct: 23  KKLHAQLLRTGMLFLSHNLHTQLIATYAACLPNNNLQSLNNFFKCMNSTNPLHFNAIISD 82

Query: 181 FAQHGSDCYALHTFSFMHYNGVYLDSYALCCSLKSASCLKNVLFGQMMHAYVEKSGWLCS 360
           F + G    AL +FSF+H NGV LD+YALC +L ++S +K++  G+ +HA+V KSGW  S
Sbjct: 83  FCRKGLPFLALASFSFVHANGVPLDTYALCSTLTASSKVKDLNLGKQIHAHVAKSGWSSS 142

Query: 361 VFVGSALVDSHAKVLCMNDAAKMFDEIPVKNTVCVNALITGYAEAKMWGQGIELVR 528
           VFVGSAL+D ++K+  + DAA MFDEIP KNTVC NAL++GYAEA +W Q ++LVR
Sbjct: 143 VFVGSALIDFYSKLSNVKDAAHMFDEIPEKNTVCANALLSGYAEAGLWVQELQLVR 198


>ref|XP_004147057.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
           chloroplastic-like [Cucumis sativus]
          Length = 469

 Score =  187 bits (474), Expect = 1e-45
 Identities = 88/176 (50%), Positives = 125/176 (71%)
 Frame = +1

Query: 1   QEFYAHVLRAGLFFVSPNLQTNLVLTYTSCNNKNSLKTLTHFLKCLALKNPLPFNSIISH 180
           ++ +AH+LR    F SPNL + L+L+Y+        K+L    +C+  +  L FN +IS 
Sbjct: 26  KKIHAHLLRTHFQFFSPNLHSKLILSYSQIIPNFDAKSLNGIFQCIIPRTSLTFNVMISD 85

Query: 181 FAQHGSDCYALHTFSFMHYNGVYLDSYALCCSLKSASCLKNVLFGQMMHAYVEKSGWLCS 360
           F++HG   +AL  FSFMH NGV +D+YALC SL   S ++NV++G+ +HA+V KSGWLCS
Sbjct: 86  FSRHGFQDFALMGFSFMHSNGVPIDTYALCSSLNGCSFVQNVVYGKQIHAFVGKSGWLCS 145

Query: 361 VFVGSALVDSHAKVLCMNDAAKMFDEIPVKNTVCVNALITGYAEAKMWGQGIELVR 528
           VFVGSA+VD +AK   + DA ++FDE+P+KNTVC NAL+ GY EA+MW +G+EL+R
Sbjct: 146 VFVGSAIVDMYAKNSLIYDAVEVFDEMPMKNTVCANALLAGYGEARMWVEGLELLR 201


>ref|XP_003604017.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355493065|gb|AES74268.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 742

 Score =  185 bits (469), Expect = 4e-45
 Identities = 94/177 (53%), Positives = 126/177 (71%), Gaps = 1/177 (0%)
 Frame = +1

Query: 1   QEFYAHVLRAGLFFVSPNLQTNLVLTYTSCNNKNSLKTLTH-FLKCLALKNPLPFNSIIS 177
           ++ +AH+L  G  F+  +L T L+ TYTS    N+L+TLT+ F KC+   NPL FN IIS
Sbjct: 211 KKLHAHLLTKGTLFILHDLHTQLISTYTSFFPSNNLQTLTNSFFKCMNSTNPLHFNVIIS 270

Query: 178 HFAQHGSDCYALHTFSFMHYNGVYLDSYALCCSLKSASCLKNVLFGQMMHAYVEKSGWLC 357
           HF + G    AL TFSFMH N V LD+YALC +L ++S  K+V FG+ +HA+VEKSGW  
Sbjct: 271 HFCRKGFPFLALTTFSFMHTNHVPLDTYALCSTLTASSKFKDVNFGKQIHAHVEKSGWSS 330

Query: 358 SVFVGSALVDSHAKVLCMNDAAKMFDEIPVKNTVCVNALITGYAEAKMWGQGIELVR 528
           SVFVGSAL+D ++K+L + DAA +FDEIP +NTVC NAL++GY E  +W +  EL+R
Sbjct: 331 SVFVGSALIDFYSKLLNVKDAALVFDEIPDRNTVCANALLSGYCEFGLWVKAFELIR 387


>ref|XP_004158417.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At4g18750, chloroplastic-like [Cucumis sativus]
          Length = 497

 Score =  184 bits (468), Expect = 5e-45
 Identities = 87/176 (49%), Positives = 123/176 (69%)
 Frame = +1

Query: 1   QEFYAHVLRAGLFFVSPNLQTNLVLTYTSCNNKNSLKTLTHFLKCLALKNPLPFNSIISH 180
           ++ +AH+LR    F SPNL + L+L+Y+        K+L    +C+  +  L FN +IS 
Sbjct: 54  KKIHAHLLRTHFQFFSPNLHSKLILSYSQIIPNFDAKSLNGIFQCIIPRTSLTFNVMISD 113

Query: 181 FAQHGSDCYALHTFSFMHYNGVYLDSYALCCSLKSASCLKNVLFGQMMHAYVEKSGWLCS 360
           F++HG   +AL  FSFMH NGV +D+YALC SL   S  + V++G+ +HA+V KSGWLCS
Sbjct: 114 FSRHGFQDFALMGFSFMHSNGVPIDTYALCSSLNGCSLFRXVVYGKQIHAFVGKSGWLCS 173

Query: 361 VFVGSALVDSHAKVLCMNDAAKMFDEIPVKNTVCVNALITGYAEAKMWGQGIELVR 528
           VFVGSA+VD +AK   + DA ++FDE+P+KNTVC NAL+ GY EA+MW +G+EL+R
Sbjct: 174 VFVGSAIVDMYAKNSLIYDAVEVFDEMPMKNTVCANALLAGYGEARMWVEGLELLR 229


>emb|CBI37965.3| unnamed protein product [Vitis vinifera]
          Length = 371

 Score =  140 bits (353), Expect = 1e-31
 Identities = 65/100 (65%), Positives = 81/100 (81%)
 Frame = +1

Query: 229 MHYNGVYLDSYALCCSLKSASCLKNVLFGQMMHAYVEKSGWLCSVFVGSALVDSHAKVLC 408
           MH NGV LD+Y+ CCSL ++  +KNV FG  +HA VEKSGWL SVFVGSALVD +AK+  
Sbjct: 1   MHTNGVPLDTYSFCCSLVASCSMKNVKFGAQIHARVEKSGWLSSVFVGSALVDMYAKLSL 60

Query: 409 MNDAAKMFDEIPVKNTVCVNALITGYAEAKMWGQGIELVR 528
           +NDAA +FDEIPVKNTVC NAL++GY EAK+W +G++ VR
Sbjct: 61  INDAAMVFDEIPVKNTVCANALLSGYGEAKLWVEGLDFVR 100


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