BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00024747
         (327 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004169848.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed...    82   5e-14
ref|XP_004148776.1| PREDICTED: DNA-directed RNA polymerase III s...    82   5e-14
gb|AAS79696.1| RNA polymerase III large subunit [Zamia muricata]       80   1e-13
gb|AAS79690.1| RNA polymerase III large subunit [Ephedra viridis]      80   1e-13
gb|AAS79697.1| RNA polymerase III large subunit [Ginkgo biloba]        80   2e-13

>ref|XP_004169848.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase III
           subunit rpc1-like, partial [Cucumis sativus]
          Length = 693

 Score = 82.0 bits (201), Expect = 5e-14
 Identities = 44/79 (55%), Positives = 51/79 (64%)
 Frame = -2

Query: 323 DGMDPAQMEEKSGLPLNFERLLMKAKATCPVIEQKTLSIEEIKQTVDEIIEKKLIKSTMT 144
           DGMDPAQME KSG PLNFERL +KAKATCP    K LS  E  +TV    E +L K   +
Sbjct: 600 DGMDPAQMEGKSGAPLNFERLFLKAKATCPSDGNKILSPSEFSETV----EDRLSKDDAS 655

Query: 143 PEEGCLEAYANSLRNFIEK 87
           PE GC  A+  SL+ F+ K
Sbjct: 656 PECGCSPAFVGSLKIFLNK 674


>ref|XP_004148776.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like [Cucumis
            sativus]
          Length = 1400

 Score = 82.0 bits (201), Expect = 5e-14
 Identities = 44/79 (55%), Positives = 51/79 (64%)
 Frame = -2

Query: 323  DGMDPAQMEEKSGLPLNFERLLMKAKATCPVIEQKTLSIEEIKQTVDEIIEKKLIKSTMT 144
            DGMDPAQME KSG PLNFERL +KAKATCP    K LS  E  +TV    E +L K   +
Sbjct: 902  DGMDPAQMEGKSGAPLNFERLFLKAKATCPSDGNKILSPSEFSETV----EDRLSKDDAS 957

Query: 143  PEEGCLEAYANSLRNFIEK 87
            PE GC  A+  SL+ F+ K
Sbjct: 958  PECGCSPAFVGSLKIFLNK 976


>gb|AAS79696.1| RNA polymerase III large subunit [Zamia muricata]
          Length = 548

 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 53/120 (44%), Positives = 66/120 (55%), Gaps = 15/120 (12%)
 Frame = -2

Query: 323 DGMDPAQMEEKSGLPLNFERLLMKAKATCPVIEQKTLSIEEIKQTVDEIIEKKLIKSTMT 144
           D MDP  ME K+G PLN +R+LMKAKATCP     +LS  EI + V    E +L K  MT
Sbjct: 398 DAMDPVNMEGKNGTPLNLDRILMKAKATCPANGAFSLSPSEISKRV----EDRLSKHDMT 453

Query: 143 PEEGCLEAYANSLRNFIEKKY-----PSPLLKLELD----------EGQFSNISGITRQQ 9
           PE GC  A+ NSL  F+EK+         +L L +D          E   S+ISG+T QQ
Sbjct: 454 PEGGCSAAFKNSLAQFLEKQISLIQNTRCVLGLPMDANGDPNLSTLERIASDISGLTAQQ 513


>gb|AAS79690.1| RNA polymerase III large subunit [Ephedra viridis]
          Length = 548

 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 46/93 (49%), Positives = 55/93 (59%)
 Frame = -2

Query: 323 DGMDPAQMEEKSGLPLNFERLLMKAKATCPVIEQKTLSIEEIKQTVDEIIEKKLIKSTMT 144
           D MDP  ME K G PLN +RLL+K KATCP      LS+ E+ + VDE    +L K  M 
Sbjct: 398 DAMDPVHMEGKDGEPLNLDRLLIKTKATCPANGSPALSVSELSKRVDE----RLSKYDMQ 453

Query: 143 PEEGCLEAYANSLRNFIEKKYPSPLLKLELDEG 45
           PE GC  A+ NSL NF+E KY S + K  L  G
Sbjct: 454 PEAGCSAAFRNSLFNFLE-KYISNVKKTRLTLG 485


>gb|AAS79697.1| RNA polymerase III large subunit [Ginkgo biloba]
          Length = 548

 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 52/120 (43%), Positives = 65/120 (54%), Gaps = 15/120 (12%)
 Frame = -2

Query: 323 DGMDPAQMEEKSGLPLNFERLLMKAKATCPVIEQKTLSIEEIKQTVDEIIEKKLIKSTMT 144
           DGMDP  ME K G PLN +RLLMK KATCP      LS  EI + V+E    +L+K  MT
Sbjct: 398 DGMDPVNMEGKDGPPLNLDRLLMKTKATCPANGSVALSPSEIIRKVEE----RLLKHDMT 453

Query: 143 PEEGCLEAYANSLRNFIEKKYPS-----PLLKLELD----------EGQFSNISGITRQQ 9
           PE GC  A+ +SL  F EK   S      +L L +D          E   ++ISG+T +Q
Sbjct: 454 PEGGCSAAFKSSLTKFFEKSIYSIRKSRSVLGLPMDPNGEQDLSILERTAADISGLTARQ 513