BLASTX nr result

ID: Scutellaria23_contig00024674 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00024674
         (383 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003631274.1| PREDICTED: pentatricopeptide repeat-containi...   132   3e-29
emb|CBI28554.3| unnamed protein product [Vitis vinifera]              132   3e-29
emb|CAN65318.1| hypothetical protein VITISV_006411 [Vitis vinifera]   130   8e-29
ref|XP_002328586.1| predicted protein [Populus trichocarpa] gi|2...   127   7e-28
ref|XP_004143068.1| PREDICTED: pentatricopeptide repeat-containi...   121   7e-26

>ref|XP_003631274.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74600,
           chloroplastic-like [Vitis vinifera]
          Length = 667

 Score =  132 bits (332), Expect = 3e-29
 Identities = 67/121 (55%), Positives = 86/121 (71%)
 Frame = -2

Query: 364 PRKALSLYREMVFEGFVENSSTFSTVLSMCSCARFFREGHEVHCRAIVLGFNMNVYIGSA 185
           P++A   Y EMVF+G  E+SSTFS+VLS+CS A   +E  +VH R I LGF+ N+Y+  +
Sbjct: 92  PKQAFQYYSEMVFQGIRESSSTFSSVLSVCSNAGLHQEAIQVHSRVIFLGFSSNLYVAGS 151

Query: 184 LVDLYLRMGDIDKGLRLFSTLQERNLATWNVVLRGLSEVGRSKELGTMYDAMKLDGLDPN 5
           LVDLY++MGD D  LRLFS L  RNLA  N+VLRG  E+ RS+ L TMY AMK + + PN
Sbjct: 152 LVDLYMQMGDCDTALRLFSNLPRRNLAICNLVLRGFCELSRSEWLFTMYSAMKEECVKPN 211

Query: 4   G 2
           G
Sbjct: 212 G 212



 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 30/116 (25%), Positives = 58/116 (50%), Gaps = 1/116 (0%)
 Frame = -2

Query: 349 SLYREMVFEGFVENSSTFSTVLSMCSCARFFREGHEVHCRAIVLGF-NMNVYIGSALVDL 173
           ++Y  M  E    N  TF  ++  C   RF  EG ++HC AI +G+   N++  +ALVD 
Sbjct: 198 TMYSAMKEECVKPNGLTFCYLIRGCGNGRFCDEGKQLHCHAIKVGWVEANLFAANALVDF 257

Query: 172 YLRMGDIDKGLRLFSTLQERNLATWNVVLRGLSEVGRSKELGTMYDAMKLDGLDPN 5
           Y   G++    + F  +++ ++ +WN ++   +  G   +   ++  M+  G  P+
Sbjct: 258 YCVCGNLIDAKKSFEAIRDEDVISWNSIVSVFAASGLLSDALELFARMQSWGKKPS 313


>emb|CBI28554.3| unnamed protein product [Vitis vinifera]
          Length = 1125

 Score =  132 bits (332), Expect = 3e-29
 Identities = 67/121 (55%), Positives = 86/121 (71%)
 Frame = -2

Query: 364 PRKALSLYREMVFEGFVENSSTFSTVLSMCSCARFFREGHEVHCRAIVLGFNMNVYIGSA 185
           P++A   Y EMVF+G  E+SSTFS+VLS+CS A   +E  +VH R I LGF+ N+Y+  +
Sbjct: 92  PKQAFQYYSEMVFQGIRESSSTFSSVLSVCSNAGLHQEAIQVHSRVIFLGFSSNLYVAGS 151

Query: 184 LVDLYLRMGDIDKGLRLFSTLQERNLATWNVVLRGLSEVGRSKELGTMYDAMKLDGLDPN 5
           LVDLY++MGD D  LRLFS L  RNLA  N+VLRG  E+ RS+ L TMY AMK + + PN
Sbjct: 152 LVDLYMQMGDCDTALRLFSNLPRRNLAICNLVLRGFCELSRSEWLFTMYSAMKEECVKPN 211

Query: 4   G 2
           G
Sbjct: 212 G 212



 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 30/116 (25%), Positives = 58/116 (50%), Gaps = 1/116 (0%)
 Frame = -2

Query: 349 SLYREMVFEGFVENSSTFSTVLSMCSCARFFREGHEVHCRAIVLGF-NMNVYIGSALVDL 173
           ++Y  M  E    N  TF  ++  C   RF  EG ++HC AI +G+   N++  +ALVD 
Sbjct: 198 TMYSAMKEECVKPNGLTFCYLIRGCGNGRFCDEGKQLHCHAIKVGWVEANLFAANALVDF 257

Query: 172 YLRMGDIDKGLRLFSTLQERNLATWNVVLRGLSEVGRSKELGTMYDAMKLDGLDPN 5
           Y   G++    + F  +++ ++ +WN ++   +  G   +   ++  M+  G  P+
Sbjct: 258 YCVCGNLIDAKKSFEAIRDEDVISWNSIVSVFAASGLLSDALELFARMQSWGKKPS 313


>emb|CAN65318.1| hypothetical protein VITISV_006411 [Vitis vinifera]
          Length = 1052

 Score =  130 bits (328), Expect = 8e-29
 Identities = 67/127 (52%), Positives = 87/127 (68%)
 Frame = -2

Query: 382 HYRCGFPRKALSLYREMVFEGFVENSSTFSTVLSMCSCARFFREGHEVHCRAIVLGFNMN 203
           H +   P++A   Y EMVF+G  E+SSTFS+VLS+CS A   +E  +VH R I LGF+ N
Sbjct: 86  HRQHELPKQAFQYYSEMVFQGIRESSSTFSSVLSVCSNAGLHQEAIQVHSRVIFLGFSSN 145

Query: 202 VYIGSALVDLYLRMGDIDKGLRLFSTLQERNLATWNVVLRGLSEVGRSKELGTMYDAMKL 23
           +Y+  +LVDLY++MGD D  LRLFS L  RNLA  N+VLRG  E+ RS+ L  MY AMK 
Sbjct: 146 LYVAGSLVDLYMQMGDCDTALRLFSNLPRRNLAICNLVLRGFCELSRSEWLFNMYPAMKE 205

Query: 22  DGLDPNG 2
           + + PNG
Sbjct: 206 ECVKPNG 212



 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 35/125 (28%), Positives = 55/125 (44%), Gaps = 2/125 (1%)
 Frame = -2

Query: 373 CGFPRKALSLYREMVFEGFVENSSTFSTVL--SMCSCARFFREGHEVHCRAIVLGFNMNV 200
           CG     L L+  MV EG   +  T ST L  S+ S          +HC AI  GF  + 
Sbjct: 383 CGIVEDVLELFGLMVDEGIGVDEVTLSTSLKASLVSAFGSLAXCRLLHCXAIKSGFEFDT 442

Query: 199 YIGSALVDLYLRMGDIDKGLRLFSTLQERNLATWNVVLRGLSEVGRSKELGTMYDAMKLD 20
            +  +L+D Y + G ++   ++F  L   N   +  ++ G +  G  +E   M + M   
Sbjct: 443 AVSCSLIDAYSKYGHVELSHQIFEQLHSPNAICFTSIINGYARNGMGREGLEMLEIMAKQ 502

Query: 19  GLDPN 5
           GL P+
Sbjct: 503 GLKPD 507


>ref|XP_002328586.1| predicted protein [Populus trichocarpa] gi|222838568|gb|EEE76933.1|
           predicted protein [Populus trichocarpa]
          Length = 699

 Score =  127 bits (320), Expect = 7e-28
 Identities = 66/124 (53%), Positives = 85/124 (68%), Gaps = 1/124 (0%)
 Frame = -2

Query: 370 GFPRKALSLYREMVFEGFVENSSTFSTVLSMCSCAR-FFREGHEVHCRAIVLGFNMNVYI 194
           G P++AL  Y EMV  G  E+ STFS+VLS+CS    F R+G +VHCR I LG   N++I
Sbjct: 104 GIPKQALYYYYEMVSLGIKESPSTFSSVLSICSSQDGFLRQGIQVHCRIIKLGCGSNLFI 163

Query: 193 GSALVDLYLRMGDIDKGLRLFSTLQERNLATWNVVLRGLSEVGRSKELGTMYDAMKLDGL 14
            ++LV  Y++MG  D G  LF  + ERNLATWN+VLRG  E+GR  EL ++Y  MKLDG+
Sbjct: 164 RTSLVGFYMQMGCFDLGFSLFDEMPERNLATWNLVLRGFCELGRFHELLSVYHEMKLDGV 223

Query: 13  DPNG 2
            PNG
Sbjct: 224 HPNG 227



 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 38/125 (30%), Positives = 62/125 (49%), Gaps = 2/125 (1%)
 Frame = -2

Query: 373 CGFPRKALSLYREMVFEGFVENSSTFSTVLSMCSCARF--FREGHEVHCRAIVLGFNMNV 200
           CG     + +Y  MV EG   +  TFST L   S + F        VHC A+ LGF  ++
Sbjct: 408 CGIVYDVVEMYGLMVDEGIGLDEVTFSTTLKALSVSEFASMDSCRLVHCCAMKLGFGSDI 467

Query: 199 YIGSALVDLYLRMGDIDKGLRLFSTLQERNLATWNVVLRGLSEVGRSKELGTMYDAMKLD 20
            +  +L+D Y R G +    ++F  L   N+  +  ++ GL++ G  +E    ++AM   
Sbjct: 468 AVSCSLIDAYSRCGHVQLSKKVFEQLPSPNVICFTSIINGLAQNGLGRECLQTFEAMIRK 527

Query: 19  GLDPN 5
           GL+P+
Sbjct: 528 GLEPD 532



 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 30/113 (26%), Positives = 60/113 (53%), Gaps = 1/113 (0%)
 Frame = -2

Query: 352 LSLYREMVFEGFVENSSTFSTVLSMCSCARFFREGHEVHCRAIVLGF-NMNVYIGSALVD 176
           LS+Y EM  +G   N  +F  ++  C   +FF EG ++HC  I +G+   N+++ +ALVD
Sbjct: 212 LSVYHEMKLDGVHPNGLSFCYLIRGCCNEKFFYEGKQLHCHIIKVGWARSNIFVANALVD 271

Query: 175 LYLRMGDIDKGLRLFSTLQERNLATWNVVLRGLSEVGRSKELGTMYDAMKLDG 17
            Y     ++   + F +++  ++ +WN ++   ++ G   E   ++  M+  G
Sbjct: 272 FYSACKSLNDARKSFESIKVEDVISWNSIVSVYADCGLLFEAVELFYLMQFWG 324


>ref|XP_004143068.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g13600-like [Cucumis sativus]
          Length = 812

 Score =  121 bits (303), Expect = 7e-26
 Identities = 52/123 (42%), Positives = 85/123 (69%)
 Frame = -2

Query: 370 GFPRKALSLYREMVFEGFVENSSTFSTVLSMCSCARFFREGHEVHCRAIVLGFNMNVYIG 191
           G+P++A  +Y +MV  G  E++STF++VL  CS   FF+EG ++HCR ++ GF +N++I 
Sbjct: 90  GYPQRAFGIYSQMVLRGIRESASTFTSVLGTCSNMDFFKEGSQIHCRVVLFGFTLNLFIA 149

Query: 190 SALVDLYLRMGDIDKGLRLFSTLQERNLATWNVVLRGLSEVGRSKELGTMYDAMKLDGLD 11
           S+L+  Y+RMG     L+LF  L +RN+A WN++LR   E+ + ++L   +  M+L+GL+
Sbjct: 150 SSLIGFYMRMGLHTVALKLFDELPQRNIAVWNLLLRWCCELRQFEKLQGFFSKMQLEGLE 209

Query: 10  PNG 2
           PNG
Sbjct: 210 PNG 212


Top