BLASTX nr result

ID: Scutellaria23_contig00024505 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00024505
         (317 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276972.2| PREDICTED: probable DEAD-box ATP-dependent R...   100   1e-19
ref|XP_002886417.1| hypothetical protein ARALYDRAFT_893124 [Arab...   100   2e-19
ref|XP_002886414.1| hypothetical protein ARALYDRAFT_315081 [Arab...   100   2e-19
ref|XP_002298050.1| predicted protein [Populus trichocarpa] gi|2...   100   2e-19
ref|NP_178818.1| putative DEAD-box ATP-dependent RNA helicase 33...    99   3e-19

>ref|XP_002276972.2| PREDICTED: probable DEAD-box ATP-dependent RNA helicase 48-like
           [Vitis vinifera] gi|297742558|emb|CBI34707.3| unnamed
           protein product [Vitis vinifera]
          Length = 754

 Score =  100 bits (250), Expect = 1e-19
 Identities = 55/103 (53%), Positives = 64/103 (62%), Gaps = 1/103 (0%)
 Frame = +1

Query: 10  SSKTLNNRLIFLRRMGGGPRTFPGGLNKWQWKRMHXXXXXXXXXXXXXXXXXVYQARIRS 189
           SS  L     F R MGGGPRTFPGG+NKWQWKR+H                 +Y+ARIRS
Sbjct: 12  SSSKLLCTFFFARPMGGGPRTFPGGINKWQWKRLHEKKAREKEKRLLDHEKQLYEARIRS 71

Query: 190 DIRAKLVAAENPVSGPEMS-DQNQPNYGPLTPQEHIKVLADRF 315
            IRAKL  A  PVS  E S D + PN+ P++PQ+HIK LADRF
Sbjct: 72  QIRAKL--AGKPVS--EFSPDSDHPNHNPMSPQDHIKALADRF 110


>ref|XP_002886417.1| hypothetical protein ARALYDRAFT_893124 [Arabidopsis lyrata subsp.
           lyrata] gi|297332258|gb|EFH62676.1| hypothetical protein
           ARALYDRAFT_893124 [Arabidopsis lyrata subsp. lyrata]
          Length = 808

 Score =  100 bits (248), Expect = 2e-19
 Identities = 50/93 (53%), Positives = 64/93 (68%)
 Frame = +1

Query: 37  IFLRRMGGGPRTFPGGLNKWQWKRMHXXXXXXXXXXXXXXXXXVYQARIRSDIRAKLVAA 216
           IF R MGGGPRTFPGGLNKWQWKRMH                 +Y+ARIR++IRAK+   
Sbjct: 21  IFSRNMGGGPRTFPGGLNKWQWKRMHEKKAREKENKLLDQEKQLYEARIRTEIRAKMWG- 79

Query: 217 ENPVSGPEMSDQNQPNYGPLTPQEHIKVLADRF 315
            NP SG E + +++ ++GP++P+EHIK LADRF
Sbjct: 80  -NPDSG-EKTAKSKQSHGPMSPKEHIKTLADRF 110


>ref|XP_002886414.1| hypothetical protein ARALYDRAFT_315081 [Arabidopsis lyrata subsp.
           lyrata] gi|297332255|gb|EFH62673.1| hypothetical protein
           ARALYDRAFT_315081 [Arabidopsis lyrata subsp. lyrata]
          Length = 793

 Score =  100 bits (248), Expect = 2e-19
 Identities = 50/93 (53%), Positives = 64/93 (68%)
 Frame = +1

Query: 37  IFLRRMGGGPRTFPGGLNKWQWKRMHXXXXXXXXXXXXXXXXXVYQARIRSDIRAKLVAA 216
           IF R MGGGPRTFPGGLNKWQWKRMH                 +Y+ARIR++IRAK+   
Sbjct: 21  IFSRNMGGGPRTFPGGLNKWQWKRMHEKKAREKENKLLDQEKQLYEARIRTEIRAKMWG- 79

Query: 217 ENPVSGPEMSDQNQPNYGPLTPQEHIKVLADRF 315
            NP SG E + +++ ++GP++P+EHIK LADRF
Sbjct: 80  -NPDSG-EKTAKSKQSHGPMSPKEHIKTLADRF 110


>ref|XP_002298050.1| predicted protein [Populus trichocarpa] gi|222845308|gb|EEE82855.1|
           predicted protein [Populus trichocarpa]
          Length = 784

 Score =  100 bits (248), Expect = 2e-19
 Identities = 51/106 (48%), Positives = 67/106 (63%), Gaps = 3/106 (2%)
 Frame = +1

Query: 7   YSSKTLNNRL---IFLRRMGGGPRTFPGGLNKWQWKRMHXXXXXXXXXXXXXXXXXVYQA 177
           + SK+L+ +L   IF+R MGGGPRTFPGGLNKWQWKR+H                 +YQA
Sbjct: 7   HRSKSLSEQLRTRIFIRLMGGGPRTFPGGLNKWQWKRLHEKKAKEKEKRLLDQEKQLYQA 66

Query: 178 RIRSDIRAKLVAAENPVSGPEMSDQNQPNYGPLTPQEHIKVLADRF 315
           R+RS+IR+KL    +P   P+ S      + P++P+EHIK LADRF
Sbjct: 67  RMRSNIRSKLAGQPDPNLNPDPS-----KFNPMSPKEHIKALADRF 107


>ref|NP_178818.1| putative DEAD-box ATP-dependent RNA helicase 33 [Arabidopsis
           thaliana] gi|75318697|sp|O80792.1|RH33_ARATH RecName:
           Full=Putative DEAD-box ATP-dependent RNA helicase 33
           gi|3327394|gb|AAC26676.1| putative RNA helicase
           [Arabidopsis thaliana] gi|330251036|gb|AEC06130.1|
           putative DEAD-box ATP-dependent RNA helicase 33
           [Arabidopsis thaliana]
          Length = 845

 Score = 99.4 bits (246), Expect = 3e-19
 Identities = 53/102 (51%), Positives = 68/102 (66%)
 Frame = +1

Query: 10  SSKTLNNRLIFLRRMGGGPRTFPGGLNKWQWKRMHXXXXXXXXXXXXXXXXXVYQARIRS 189
           S ++L NR IF R MGGGPRTFPGGLNKWQWKRMH                 +Y+ARIR+
Sbjct: 63  SERSLWNR-IFSRNMGGGPRTFPGGLNKWQWKRMHEKKAREKENKLLDQEKQLYEARIRT 121

Query: 190 DIRAKLVAAENPVSGPEMSDQNQPNYGPLTPQEHIKVLADRF 315
           +IRAK+    +P SG + +   Q ++GP++P+EHIK LADRF
Sbjct: 122 EIRAKMWG--HPDSGEKTAKLKQ-SHGPMSPKEHIKTLADRF 160


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