BLASTX nr result

ID: Scutellaria23_contig00024483 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00024483
         (236 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002331487.1| predicted protein [Populus trichocarpa] gi|2...   114   1e-23
ref|XP_004148898.1| PREDICTED: pentatricopeptide repeat-containi...   111   7e-23
ref|XP_003625322.1| Pentatricopeptide repeat protein [Medicago t...   104   7e-21
ref|XP_002443092.1| hypothetical protein SORBIDRAFT_08g008260 [S...    92   4e-17
ref|XP_002309169.1| predicted protein [Populus trichocarpa] gi|2...    91   1e-16

>ref|XP_002331487.1| predicted protein [Populus trichocarpa] gi|222873565|gb|EEF10696.1|
           predicted protein [Populus trichocarpa]
          Length = 606

 Score =  114 bits (284), Expect = 1e-23
 Identities = 51/75 (68%), Positives = 63/75 (84%)
 Frame = +3

Query: 6   LDPKDSGTYVLLASLCANQRKWGDVRMARSMMRERGIKKTPGSSLIEVEGVFHEFLVGDE 185
           LDP+DSG YVLLA++CA+ R+WGDV+MAR MMRER +KK PG S++EVEG FHEFL GDE
Sbjct: 520 LDPEDSGIYVLLANICASGRRWGDVKMARRMMRERRVKKIPGRSIVEVEGQFHEFLAGDE 579

Query: 186 SHPKSKAIYKVLAEL 230
           SHP+S+ IY  L +L
Sbjct: 580 SHPQSEGIYNALDQL 594


>ref|XP_004148898.1| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
           mitochondrial-like [Cucumis sativus]
          Length = 675

 Score =  111 bits (277), Expect = 7e-23
 Identities = 52/77 (67%), Positives = 62/77 (80%)
 Frame = +3

Query: 6   LDPKDSGTYVLLASLCANQRKWGDVRMARSMMRERGIKKTPGSSLIEVEGVFHEFLVGDE 185
           LDP+DSG Y LLA++CA+ +KW DVRM R MMRERG+KK PG SLIE+EG FHEFLV D 
Sbjct: 585 LDPEDSGIYSLLANICADGKKWKDVRMVRRMMRERGVKKVPGHSLIEIEGKFHEFLVADT 644

Query: 186 SHPKSKAIYKVLAELLL 236
           SH +S  IY+V+ ELLL
Sbjct: 645 SHTRSSEIYRVVNELLL 661


>ref|XP_003625322.1| Pentatricopeptide repeat protein [Medicago truncatula]
           gi|355500337|gb|AES81540.1| Pentatricopeptide repeat
           protein [Medicago truncatula]
          Length = 1024

 Score =  104 bits (260), Expect = 7e-21
 Identities = 47/71 (66%), Positives = 59/71 (83%)
 Frame = +3

Query: 6   LDPKDSGTYVLLASLCANQRKWGDVRMARSMMRERGIKKTPGSSLIEVEGVFHEFLVGDE 185
           LDP+DSG YVLLA+ CAN RKW DVR  RS+M+++G+KK PG SLIE++G F EFLV DE
Sbjct: 689 LDPEDSGIYVLLANTCANDRKWSDVRRVRSLMKDKGVKKIPGYSLIEIDGGFVEFLVADE 748

Query: 186 SHPKSKAIYKV 218
           SHP+S+ IYK+
Sbjct: 749 SHPQSEEIYKL 759


>ref|XP_002443092.1| hypothetical protein SORBIDRAFT_08g008260 [Sorghum bicolor]
           gi|241943785|gb|EES16930.1| hypothetical protein
           SORBIDRAFT_08g008260 [Sorghum bicolor]
          Length = 655

 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 42/77 (54%), Positives = 55/77 (71%)
 Frame = +3

Query: 6   LDPKDSGTYVLLASLCANQRKWGDVRMARSMMRERGIKKTPGSSLIEVEGVFHEFLVGDE 185
           LDP DSG YVL++ + A++ KWG V+M R++MR+RG+KK PG S IEV+G FHEFL  D 
Sbjct: 564 LDPSDSGIYVLMSQIYASKSKWGQVKMIRTVMRDRGVKKNPGCSSIEVDGKFHEFLAADV 623

Query: 186 SHPKSKAIYKVLAELLL 236
           SH  S+ IY  L  + L
Sbjct: 624 SHAHSEDIYAALENIYL 640


>ref|XP_002309169.1| predicted protein [Populus trichocarpa] gi|222855145|gb|EEE92692.1|
           predicted protein [Populus trichocarpa]
          Length = 619

 Score = 90.5 bits (223), Expect = 1e-16
 Identities = 44/76 (57%), Positives = 54/76 (71%)
 Frame = +3

Query: 6   LDPKDSGTYVLLASLCANQRKWGDVRMARSMMRERGIKKTPGSSLIEVEGVFHEFLVGDE 185
           L+P +SG YVLL+++ +   KW D    RS+M ERGIKK PG S IEV+GV HEFLVGD 
Sbjct: 445 LEPSNSGNYVLLSNIYSASHKWEDAAKIRSIMSERGIKKVPGYSWIEVDGVVHEFLVGDT 504

Query: 186 SHPKSKAIYKVLAELL 233
           SHP S+ IY  L EL+
Sbjct: 505 SHPLSEKIYAKLGELV 520


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