BLASTX nr result

ID: Scutellaria23_contig00024469 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00024469
         (254 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004134398.1| PREDICTED: pentatricopeptide repeat-containi...   110   2e-22
ref|XP_002283262.2| PREDICTED: pentatricopeptide repeat-containi...    99   3e-19
ref|XP_003532686.1| PREDICTED: pentatricopeptide repeat-containi...    99   3e-19
ref|XP_003524140.1| PREDICTED: pentatricopeptide repeat-containi...    99   4e-19
gb|AEB39775.1| pentatricopeptide repeat protein 71 [Funaria hygr...    97   2e-18

>ref|XP_004134398.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33170-like [Cucumis sativus]
           gi|449487598|ref|XP_004157706.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At4g33170-like [Cucumis sativus]
          Length = 583

 Score =  110 bits (274), Expect = 2e-22
 Identities = 51/82 (62%), Positives = 66/82 (80%)
 Frame = -3

Query: 249 VRKEVGRSWIEVRGDIHVFFAGDRRHSRKDEIYAKLTELMTDIEKLGYVPSWDEMLHEVG 70
           V+K  G+SWIEVRG+ HVF AGDR H R +E+ AKL EL+ +IEKLGYVP   E LH+VG
Sbjct: 443 VKKISGKSWIEVRGEAHVFLAGDRNHERAEEMNAKLKELVGEIEKLGYVPVCSETLHKVG 502

Query: 69  DEQKRELLWYHSEKLAVAYGLL 4
           +++++E L YHSEKLA+AYG+L
Sbjct: 503 EKERKEALLYHSEKLALAYGIL 524


>ref|XP_002283262.2| PREDICTED: pentatricopeptide repeat-containing protein At4g33170
           [Vitis vinifera]
          Length = 590

 Score = 99.4 bits (246), Expect = 3e-19
 Identities = 50/83 (60%), Positives = 59/83 (71%)
 Frame = -3

Query: 249 VRKEVGRSWIEVRGDIHVFFAGDRRHSRKDEIYAKLTELMTDIEKLGYVPSWDEMLHEVG 70
           V+KE GRSWIEVRG +HVF AGDRRH R  EIYAKL ELM  IE+LGY            
Sbjct: 447 VKKEGGRSWIEVRGKVHVFLAGDRRHERSHEIYAKLVELMEKIEELGY-----------K 495

Query: 69  DEQKRELLWYHSEKLAVAYGLLN 1
           +  K+E LWYHSEKLAVA+G+++
Sbjct: 496 EGVKKETLWYHSEKLAVAFGVVS 518


>ref|XP_003532686.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33170-like [Glycine max]
          Length = 561

 Score = 99.4 bits (246), Expect = 3e-19
 Identities = 49/83 (59%), Positives = 60/83 (72%)
 Frame = -3

Query: 252 RVRKEVGRSWIEVRGDIHVFFAGDRRHSRKDEIYAKLTELMTDIEKLGYVPSWDEMLHEV 73
           RV+K+ GRSWIEV+G++HVF AGD +H R  EIY KL ELM DIEKLGY           
Sbjct: 433 RVKKKGGRSWIEVQGEVHVFVAGDWKHERSKEIYQKLAELMGDIEKLGY----------- 481

Query: 72  GDEQKRELLWYHSEKLAVAYGLL 4
             E+++E LWYHSEKLAVA+G+L
Sbjct: 482 --EKRKEALWYHSEKLAVAFGVL 502


>ref|XP_003524140.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33170-like [Glycine max]
          Length = 561

 Score = 99.0 bits (245), Expect = 4e-19
 Identities = 49/83 (59%), Positives = 60/83 (72%)
 Frame = -3

Query: 252 RVRKEVGRSWIEVRGDIHVFFAGDRRHSRKDEIYAKLTELMTDIEKLGYVPSWDEMLHEV 73
           RV+K+ GRSWIEV+G++HVF AGD +H R  EIY KL ELM DIEKLGY           
Sbjct: 433 RVKKKGGRSWIEVQGEVHVFVAGDWKHERSKEIYQKLAELMGDIEKLGY----------- 481

Query: 72  GDEQKRELLWYHSEKLAVAYGLL 4
             E+++E LWYHSEKLAVA+G+L
Sbjct: 482 --EKRKESLWYHSEKLAVAFGVL 502


>gb|AEB39775.1| pentatricopeptide repeat protein 71 [Funaria hygrometrica]
          Length = 837

 Score = 96.7 bits (239), Expect = 2e-18
 Identities = 44/83 (53%), Positives = 59/83 (71%)
 Frame = -3

Query: 249 VRKEVGRSWIEVRGDIHVFFAGDRRHSRKDEIYAKLTELMTDIEKLGYVPSWDEMLHEVG 70
           VRKE G +WIEV G +H F   DR H +  EIYA+L  LMT I++ GY+P    +LH VG
Sbjct: 699 VRKEQGCTWIEVEGKLHTFVVEDRSHPQAGEIYAELARLMTAIKREGYIPVTQNVLHNVG 758

Query: 69  DEQKRELLWYHSEKLAVAYGLLN 1
           +++K E + YHSEKLA+AYG+L+
Sbjct: 759 EQEKEEAISYHSEKLAIAYGVLS 781


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