BLASTX nr result

ID: Scutellaria23_contig00024443 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00024443
         (628 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002310719.1| predicted protein [Populus trichocarpa] gi|2...   331   8e-89
gb|AFD98849.1| DNA polymerase alpha catalytic subunit [Solanum l...   327   1e-87
ref|XP_002523609.1| DNA polymerase alpha catalytic subunit, puta...   324   7e-87
ref|XP_002277947.2| PREDICTED: DNA polymerase alpha catalytic su...   318   4e-85
emb|CBH32591.1| unnamed protein product [Triticum aestivum]           316   2e-84

>ref|XP_002310719.1| predicted protein [Populus trichocarpa] gi|222853622|gb|EEE91169.1|
            predicted protein [Populus trichocarpa]
          Length = 1312

 Score =  331 bits (848), Expect = 8e-89
 Identities = 161/214 (75%), Positives = 187/214 (87%), Gaps = 5/214 (2%)
 Frame = -2

Query: 627  WSKIGRLKRSAMPKLNKGSSVFGSGASPGIMSCIAGRLLCDTYICSRDLLKEVSYSLTQL 448
            WSKIGRLKRS MPKL KG+++FGSGASPGIMSCIAGRLLCDTY+ SRDLLKEVSYSLTQL
Sbjct: 476  WSKIGRLKRSVMPKLTKGNAIFGSGASPGIMSCIAGRLLCDTYLASRDLLKEVSYSLTQL 535

Query: 447  AKTQLNKDRKEIRPHDIPSMFQSSESLMELIEFGETDAWLSMELMFHLSVLPLTRQLTNI 268
            AKT+LNKDRKEI PHDIP+MFQ+S+SL+EL+E+GETDAWLSMELMFHLS+LPLTRQLTNI
Sbjct: 536  AKTRLNKDRKEIAPHDIPTMFQTSKSLIELVEYGETDAWLSMELMFHLSILPLTRQLTNI 595

Query: 267  SGNLWHKTLQGARAQRVEYLLLHAFHAKKFIVPDKFSAQSKDTRTIKRKTSTGVKSNERD 88
            SGNLW KTLQGARAQRVEYLLLHAFHAKK+IVPDK S++ K+ +  KR+ + G++    D
Sbjct: 596  SGNLWGKTLQGARAQRVEYLLLHAFHAKKYIVPDKMSSRVKEAKITKRRINNGIEDRNAD 655

Query: 87   PDDID-----NELQENYHGKTKKGPSYSGGLVLE 1
              D D     N+ Q++ HGK KKGP+Y+GGLVLE
Sbjct: 656  ELDTDAANFENDNQQSDHGKRKKGPAYAGGLVLE 689


>gb|AFD98849.1| DNA polymerase alpha catalytic subunit [Solanum lycopersicum]
          Length = 1561

 Score =  327 bits (838), Expect = 1e-87
 Identities = 162/214 (75%), Positives = 183/214 (85%), Gaps = 5/214 (2%)
 Frame = -2

Query: 627  WSKIGRLKRSAMPKLNKGSSVFGSGASPGIMSCIAGRLLCDTYICSRDLLKEVSYSLTQL 448
            WSKIGRLKRS MPKL KGS++FGSGASPGIMSCI+GRLLCDTY+ SR+LLKEVSYSLTQL
Sbjct: 727  WSKIGRLKRSVMPKLTKGSTLFGSGASPGIMSCISGRLLCDTYLSSRELLKEVSYSLTQL 786

Query: 447  AKTQLNKDRKEIRPHDIPSMFQSSESLMELIEFGETDAWLSMELMFHLSVLPLTRQLTNI 268
             K QLNKDRKEI PHD+P MFQ+++SL+ELIE GETDAWLSMELMFHLSVLPLTRQLTNI
Sbjct: 787  VKNQLNKDRKEISPHDVPQMFQAADSLLELIECGETDAWLSMELMFHLSVLPLTRQLTNI 846

Query: 267  SGNLWHKTLQGARAQRVEYLLLHAFHAKKFIVPDKFSAQSKDTRTIKRKTSTGVKSNERD 88
            SGNLW KTLQGARAQRVEYLLLHAFHAKKFIVPDKFS+ +++ +  KRK + G +  E +
Sbjct: 847  SGNLWGKTLQGARAQRVEYLLLHAFHAKKFIVPDKFSSHAREAKITKRKLNQGDEGKETE 906

Query: 87   PDDIDNE-----LQENYHGKTKKGPSYSGGLVLE 1
            P D D+      + +  HGK KKGPSYSGGLVLE
Sbjct: 907  PIDADDPNIEGGILDINHGKAKKGPSYSGGLVLE 940


>ref|XP_002523609.1| DNA polymerase alpha catalytic subunit, putative [Ricinus communis]
            gi|223537171|gb|EEF38804.1| DNA polymerase alpha
            catalytic subunit, putative [Ricinus communis]
          Length = 1526

 Score =  324 bits (831), Expect = 7e-87
 Identities = 166/215 (77%), Positives = 185/215 (86%), Gaps = 6/215 (2%)
 Frame = -2

Query: 627  WSKIGRLKRSAMPKLNKGSSVFGSGASPGIMSCIAGRLLCDTYICSRDLLKEVSYSLTQL 448
            WSKIGRLKRS MPKL KG+++FGSGASPGIMSCIAGRLLCDTY+CSRDLLKEVSYSLT+L
Sbjct: 690  WSKIGRLKRSIMPKLTKGNTMFGSGASPGIMSCIAGRLLCDTYLCSRDLLKEVSYSLTEL 749

Query: 447  AKTQLNKDRKEIRPHDIPSMFQSSESLMELIEFGETDAWLSMELMFHLSVLPLTRQLTNI 268
            A+T+LNKDRKE+ PHDIP MFQSS+SL+ELIEFGETDAWLSMELMFHLSVLPLTRQLTNI
Sbjct: 750  ARTRLNKDRKEVTPHDIPRMFQSSKSLIELIEFGETDAWLSMELMFHLSVLPLTRQLTNI 809

Query: 267  SGNLWHKTLQGARAQRVEYLLLHAFHAKKFIVPDKFSAQ-SKDTRTIKRKTSTGVK---S 100
            SGNLW KTLQGARAQRVEYLLLHAFHAKK+IVPDK S    K+T+  KR+   GV+   +
Sbjct: 810  SGNLWGKTLQGARAQRVEYLLLHAFHAKKYIVPDKNSFHLKKETKMTKRRIHNGVEEKNA 869

Query: 99   NERDPD--DIDNELQENYHGKTKKGPSYSGGLVLE 1
             E D D  + DN+  EN  GK KKGP+Y GGLVLE
Sbjct: 870  EELDTDHANFDNDSPENDRGKGKKGPAYVGGLVLE 904


>ref|XP_002277947.2| PREDICTED: DNA polymerase alpha catalytic subunit-like [Vitis
            vinifera]
          Length = 1522

 Score =  318 bits (816), Expect = 4e-85
 Identities = 160/215 (74%), Positives = 181/215 (84%), Gaps = 6/215 (2%)
 Frame = -2

Query: 627  WSKIGRLKRSAMPKLNKGSSVFGSGASPGIMSCIAGRLLCDTYICSRDLLKEVSYSLTQL 448
            WSKIGRLKR  MPKL +GS++FGSGASPGIMSCIAGRLLCDTY+CSRDLLKEVSYSLTQL
Sbjct: 690  WSKIGRLKRRVMPKLTRGSTIFGSGASPGIMSCIAGRLLCDTYLCSRDLLKEVSYSLTQL 749

Query: 447  AKTQLNKDRKEIRPHDIPSMFQSSESLMELIEFGETDAWLSMELMFHLSVLPLTRQLTNI 268
            AKTQLNKDRKEI P D+  MFQ+SESL++LIE+GETDAWLSMELMFHLSVLPLTR LTNI
Sbjct: 750  AKTQLNKDRKEIAPQDVSRMFQTSESLVQLIEYGETDAWLSMELMFHLSVLPLTRLLTNI 809

Query: 267  SGNLWHKTLQGARAQRVEYLLLHAFHAKKFIVPDKFSAQSKDTRTIKRKTSTGVKS---- 100
            SGNLW KTLQGARAQRVEYLLLH FHAKK+IVPDK S+  ++T+  KR+ + G       
Sbjct: 810  SGNLWGKTLQGARAQRVEYLLLHEFHAKKYIVPDKISSHLRETKWTKRRMNQGGAEDRNI 869

Query: 99   NERDPDD--IDNELQENYHGKTKKGPSYSGGLVLE 1
            +E D DD  ++N+   N  GK KKGP+YSGGLVLE
Sbjct: 870  DELDVDDAHVENDAHHNNQGKGKKGPAYSGGLVLE 904


>emb|CBH32591.1| unnamed protein product [Triticum aestivum]
          Length = 1016

 Score =  316 bits (810), Expect = 2e-84
 Identities = 153/213 (71%), Positives = 183/213 (85%), Gaps = 4/213 (1%)
 Frame = -2

Query: 627  WSKIGRLKRSAMPKLNKGSSVFGSGASPGIMSCIAGRLLCDTYICSRDLLKEVSYSLTQL 448
            WSKIGRL+RS MP+L KG++++GSGASPGIMSCIAGRLLCDTY+CSRDLL+EVSYSLTQL
Sbjct: 733  WSKIGRLRRSVMPRLTKGNTLYGSGASPGIMSCIAGRLLCDTYLCSRDLLREVSYSLTQL 792

Query: 447  AKTQLNKDRKEIRPHDIPSMFQSSESLMELIEFGETDAWLSMELMFHLSVLPLTRQLTNI 268
            A+TQL KDR+E+ PHDIP MFQSS +L++L+E+GETDAWLS+ELMFHLSVLPLTRQLTNI
Sbjct: 793  AETQLKKDRREVSPHDIPPMFQSSGTLLKLVEYGETDAWLSLELMFHLSVLPLTRQLTNI 852

Query: 267  SGNLWHKTLQGARAQRVEYLLLHAFHAKKFIVPDKFSAQSKDTRTIKRK----TSTGVKS 100
            SGNLW KTLQGARAQRVEYLLLH+FHAKKFI+PDKF+A++K+  + KRK    T  G  +
Sbjct: 853  SGNLWGKTLQGARAQRVEYLLLHSFHAKKFIIPDKFAARNKELNSAKRKLNADTEGGNAA 912

Query: 99   NERDPDDIDNELQENYHGKTKKGPSYSGGLVLE 1
            +      ID+E+     GK +KGPSY+GGLVLE
Sbjct: 913  DGAADPSIDDEVHNGDQGKARKGPSYAGGLVLE 945


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