BLASTX nr result

ID: Scutellaria23_contig00024418 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00024418
         (464 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003632691.1| PREDICTED: condensin complex subunit 1-like ...   159   2e-37
ref|XP_002529162.1| condensin, putative [Ricinus communis] gi|22...   154   7e-36
ref|XP_002308898.1| condensin complex components subunit [Populu...   147   7e-34
ref|NP_001190114.1| condensin complex subunit 1 [Arabidopsis tha...   140   1e-31
ref|NP_191265.2| condensin complex subunit 1 [Arabidopsis thalia...   140   1e-31

>ref|XP_003632691.1| PREDICTED: condensin complex subunit 1-like [Vitis vinifera]
          Length = 1346

 Score =  159 bits (402), Expect = 2e-37
 Identities = 85/154 (55%), Positives = 103/154 (66%)
 Frame = +1

Query: 1    RLFGILEHLICSYSLPENIWYXXXXXXXXXLYTIHPTPEAKAADLVKRSLKSVFDSSEGS 180
            R+FGILE LI S+ LPENIWY         +Y IHPTPE  A+DLV++SL SVFD   G 
Sbjct: 754  RIFGILESLITSFWLPENIWYAAADKAIGAIYVIHPTPETLASDLVQKSLSSVFDCGGGD 813

Query: 181  ELQTDMDAGSSNVLTTVQVAKLSRYLFVVSHVAMNQLVHIESCVRXXXXXXXXXXXXXXX 360
            ELQ D++ G S+VL+TVQV KLSRYLF+VSHVAMNQL +IESCVR               
Sbjct: 814  ELQNDIENGGSSVLSTVQVTKLSRYLFIVSHVAMNQLTYIESCVRRIQKQKAKKDKIDAE 873

Query: 361  XXXPDVTIASDAQDDGINSELGFAASEDAMLDNL 462
                   +AS   ++GIN+ELG AASEDA+LD+L
Sbjct: 874  SQYVPNGMASADVENGINAELGLAASEDAILDSL 907


>ref|XP_002529162.1| condensin, putative [Ricinus communis] gi|223531386|gb|EEF33221.1|
            condensin, putative [Ricinus communis]
          Length = 1346

 Score =  154 bits (389), Expect = 7e-36
 Identities = 81/154 (52%), Positives = 105/154 (68%)
 Frame = +1

Query: 1    RLFGILEHLICSYSLPENIWYXXXXXXXXXLYTIHPTPEAKAADLVKRSLKSVFDSSEGS 180
            R+FGILE LI  + LPENIWY         +YTIHPTPE  AAD+VK+SL S+FD S G+
Sbjct: 763  RIFGILESLITGFWLPENIWYAAADKAISTIYTIHPTPETLAADIVKKSLSSIFDCSGGN 822

Query: 181  ELQTDMDAGSSNVLTTVQVAKLSRYLFVVSHVAMNQLVHIESCVRXXXXXXXXXXXXXXX 360
            +LQ ++++GS+ V+T VQV+KLSRYLF++SHVAMNQL++IESCVR               
Sbjct: 823  DLQNNVESGSTAVVTAVQVSKLSRYLFIISHVAMNQLLYIESCVRKIQKQKIKEKMVTDE 882

Query: 361  XXXPDVTIASDAQDDGINSELGFAASEDAMLDNL 462
                 +   S  Q++ IN+ELG AASEDA+LD L
Sbjct: 883  A----LFFYSSLQENNINAELGVAASEDAILDAL 912


>ref|XP_002308898.1| condensin complex components subunit [Populus trichocarpa]
            gi|222854874|gb|EEE92421.1| condensin complex components
            subunit [Populus trichocarpa]
          Length = 1334

 Score =  147 bits (372), Expect = 7e-34
 Identities = 81/156 (51%), Positives = 100/156 (64%), Gaps = 2/156 (1%)
 Frame = +1

Query: 1    RLFGILEHLICSYSLPENIWYXXXXXXXXXLYTIHPTPEAKAADLVKRSLKSVFDSSEGS 180
            R+FG LE+LI    LPEN WY         +YTIHPTPE  AADLVK+SL SVF  S G 
Sbjct: 757  RVFGFLENLISGSWLPENTWYAAADKAIGVIYTIHPTPETLAADLVKKSLSSVFICSGGD 816

Query: 181  ELQTDMDAGSSNVLTTVQVAKLSRYLFVVSHVAMNQLVHIESCVR--XXXXXXXXXXXXX 354
            +LQ D+++GS+++LTTVQVAK+SRYLFV SHVAMNQL++IE+CVR               
Sbjct: 817  DLQNDIESGSADILTTVQVAKISRYLFVTSHVAMNQLLYIETCVRKIQKQKLKRDKLGAD 876

Query: 355  XXXXXPDVTIASDAQDDGINSELGFAASEDAMLDNL 462
                  +     D   D IN+ELG +ASEDA+LD L
Sbjct: 877  GQNGHNNGIKQDDTPKDNINAELGVSASEDAILDTL 912


>ref|NP_001190114.1| condensin complex subunit 1 [Arabidopsis thaliana]
            gi|332646086|gb|AEE79607.1| condensin complex subunit 1
            [Arabidopsis thaliana]
          Length = 1415

 Score =  140 bits (352), Expect = 1e-31
 Identities = 73/154 (47%), Positives = 97/154 (62%)
 Frame = +1

Query: 1    RLFGILEHLICSYSLPENIWYXXXXXXXXXLYTIHPTPEAKAADLVKRSLKSVFDSSEGS 180
            RLFGILE LI    LPENI+Y         +Y IHPTPE  A+ ++K+SL +VFD  E  
Sbjct: 750  RLFGILESLITGNWLPENIYYATADKAISAIYMIHPTPETLASTIIKKSLSTVFDVVEQE 809

Query: 181  ELQTDMDAGSSNVLTTVQVAKLSRYLFVVSHVAMNQLVHIESCVRXXXXXXXXXXXXXXX 360
            E QTD +    ++LT VQVAKLSR+LF VSH+AMNQLV+IESC++               
Sbjct: 810  EAQTDTENNKVDILTPVQVAKLSRFLFAVSHIAMNQLVYIESCIQKIRRQKTKKDKPAAE 869

Query: 361  XXXPDVTIASDAQDDGINSELGFAASEDAMLDNL 462
                +  + +  +++GIN+ELG AAS+DA+LD L
Sbjct: 870  SQNTEENLEATQENNGINAELGLAASDDALLDTL 903


>ref|NP_191265.2| condensin complex subunit 1 [Arabidopsis thaliana]
            gi|332646085|gb|AEE79606.1| condensin complex subunit 1
            [Arabidopsis thaliana]
          Length = 1396

 Score =  140 bits (352), Expect = 1e-31
 Identities = 73/154 (47%), Positives = 97/154 (62%)
 Frame = +1

Query: 1    RLFGILEHLICSYSLPENIWYXXXXXXXXXLYTIHPTPEAKAADLVKRSLKSVFDSSEGS 180
            RLFGILE LI    LPENI+Y         +Y IHPTPE  A+ ++K+SL +VFD  E  
Sbjct: 750  RLFGILESLITGNWLPENIYYATADKAISAIYMIHPTPETLASTIIKKSLSTVFDVVEQE 809

Query: 181  ELQTDMDAGSSNVLTTVQVAKLSRYLFVVSHVAMNQLVHIESCVRXXXXXXXXXXXXXXX 360
            E QTD +    ++LT VQVAKLSR+LF VSH+AMNQLV+IESC++               
Sbjct: 810  EAQTDTENNKVDILTPVQVAKLSRFLFAVSHIAMNQLVYIESCIQKIRRQKTKKDKPAAE 869

Query: 361  XXXPDVTIASDAQDDGINSELGFAASEDAMLDNL 462
                +  + +  +++GIN+ELG AAS+DA+LD L
Sbjct: 870  SQNTEENLEATQENNGINAELGLAASDDALLDTL 903


Top