BLASTX nr result

ID: Scutellaria23_contig00024225 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00024225
         (401 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI15784.3| unnamed protein product [Vitis vinifera]              124   1e-29
ref|XP_002275696.2| PREDICTED: Werner syndrome ATP-dependent hel...   124   1e-29
ref|XP_003537375.1| PREDICTED: LOW QUALITY PROTEIN: Werner syndr...   124   8e-27
ref|XP_002319444.1| predicted protein [Populus trichocarpa] gi|2...   124   8e-27
ref|XP_002526386.1| conserved hypothetical protein [Ricinus comm...   124   1e-26

>emb|CBI15784.3| unnamed protein product [Vitis vinifera]
          Length = 969

 Score =  124 bits (312), Expect(2) = 1e-29
 Identities = 58/103 (56%), Positives = 79/103 (76%), Gaps = 1/103 (0%)
 Frame = +2

Query: 95  RMKLAKDNGTAPYALCGDQTLRRIALARPSTRARLANIDGVNQHFLKTYGDRLLRIIQDL 274
           RMK A+  GTAPYA+CG++T+++IAL RPST+ARLANIDGVNQHFL TYGD  L+ IQ L
Sbjct: 631 RMKFARGIGTAPYAICGNETIKKIALIRPSTKARLANIDGVNQHFLTTYGDHFLQSIQHL 690

Query: 275 SLKVGLSLDGEPDAEVQMPSKLVTI-HKNKRLTPAKFEAWRMW 400
           S  + L LDG+   +  +  K+  + ++ ++LTPAK+EAW+MW
Sbjct: 691 SQALNLPLDGDASMQAAVVRKMQPVPNQQRKLTPAKYEAWKMW 733



 Score = 30.4 bits (67), Expect(2) = 1e-29
 Identities = 13/24 (54%), Positives = 16/24 (66%)
 Frame = +3

Query: 27  GLTQLEFNGLSQTEDQLYKMLQEE 98
           GL   E+ G S+TE QLY ML +E
Sbjct: 607 GLATFEYEGFSETEGQLYHMLLDE 630


>ref|XP_002275696.2| PREDICTED: Werner syndrome ATP-dependent helicase-like [Vitis
           vinifera]
          Length = 913

 Score =  124 bits (312), Expect(2) = 1e-29
 Identities = 58/103 (56%), Positives = 79/103 (76%), Gaps = 1/103 (0%)
 Frame = +2

Query: 95  RMKLAKDNGTAPYALCGDQTLRRIALARPSTRARLANIDGVNQHFLKTYGDRLLRIIQDL 274
           RMK A+  GTAPYA+CG++T+++IAL RPST+ARLANIDGVNQHFL TYGD  L+ IQ L
Sbjct: 556 RMKFARGIGTAPYAICGNETIKKIALIRPSTKARLANIDGVNQHFLTTYGDHFLQSIQHL 615

Query: 275 SLKVGLSLDGEPDAEVQMPSKLVTI-HKNKRLTPAKFEAWRMW 400
           S  + L LDG+   +  +  K+  + ++ ++LTPAK+EAW+MW
Sbjct: 616 SQALNLPLDGDASMQAAVVRKMQPVPNQQRKLTPAKYEAWKMW 658



 Score = 30.4 bits (67), Expect(2) = 1e-29
 Identities = 13/24 (54%), Positives = 16/24 (66%)
 Frame = +3

Query: 27  GLTQLEFNGLSQTEDQLYKMLQEE 98
           GL   E+ G S+TE QLY ML +E
Sbjct: 532 GLATFEYEGFSETEGQLYHMLLDE 555


>ref|XP_003537375.1| PREDICTED: LOW QUALITY PROTEIN: Werner syndrome ATP-dependent
           helicase homolog [Glycine max]
          Length = 920

 Score =  124 bits (311), Expect = 8e-27
 Identities = 66/110 (60%), Positives = 82/110 (74%), Gaps = 8/110 (7%)
 Frame = +2

Query: 95  RMKLAKDNGTAPYALCGDQTLRRIALARPSTRARLANIDGVNQHFLKTYGDRLLRIIQDL 274
           R+KLA+  GTAPYA+CGDQT+++IAL RPST+ARLANIDGVNQH +  YGD  L++IQ L
Sbjct: 559 RLKLARSVGTAPYAICGDQTIKKIALPRPSTKARLANIDGVNQHLVTKYGDHFLQVIQKL 618

Query: 275 SLKVGLSLDGEPDA--------EVQMPSKLVTIHKNKRLTPAKFEAWRMW 400
           S  + LSLDGE           EV+  S LVT +K+ +LTPAKFEAW+MW
Sbjct: 619 SQGLNLSLDGEARVATASLQTNEVRKVS-LVT-NKSNKLTPAKFEAWKMW 666


>ref|XP_002319444.1| predicted protein [Populus trichocarpa] gi|222857820|gb|EEE95367.1|
           predicted protein [Populus trichocarpa]
          Length = 854

 Score =  124 bits (311), Expect = 8e-27
 Identities = 59/102 (57%), Positives = 77/102 (75%)
 Frame = +2

Query: 95  RMKLAKDNGTAPYALCGDQTLRRIALARPSTRARLANIDGVNQHFLKTYGDRLLRIIQDL 274
           R KLAK  GTAPYA+CGDQT+++IAL RPST+ARLANIDGVNQH +  +GD LL+ I+DL
Sbjct: 523 RTKLAKSIGTAPYAVCGDQTIKKIALVRPSTKARLANIDGVNQHLVVRHGDYLLQTIRDL 582

Query: 275 SLKVGLSLDGEPDAEVQMPSKLVTIHKNKRLTPAKFEAWRMW 400
           S ++ LSLDG  + +     K   +  +K+LTPAK +AW+MW
Sbjct: 583 SQELNLSLDGGANLQTANTRKANQVPNHKKLTPAKLDAWKMW 624


>ref|XP_002526386.1| conserved hypothetical protein [Ricinus communis]
           gi|223534248|gb|EEF35962.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 795

 Score =  124 bits (310), Expect = 1e-26
 Identities = 59/104 (56%), Positives = 82/104 (78%), Gaps = 2/104 (1%)
 Frame = +2

Query: 95  RMKLAKDNGTAPYALCGDQTLRRIALARPSTRARLANIDGVNQHFLKTYGDRLLRIIQDL 274
           R+KLA+  GTAPYA+CGDQT++RIAL RPST+ARLANI+GVNQH +  +GDR+L+ I+ L
Sbjct: 466 RIKLARSIGTAPYAICGDQTIKRIALTRPSTKARLANIEGVNQHLVAKHGDRILQSIRHL 525

Query: 275 SLKVGLSLDGEPDAEVQMPSKLV--TIHKNKRLTPAKFEAWRMW 400
           + ++ LSLDGE   ++ + ++ V  T +  K L+PAKFEAW+MW
Sbjct: 526 TQELNLSLDGEASLQITVNTRKVCPTPNLQKTLSPAKFEAWKMW 569


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