BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00024167
         (297 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_007353946.1| RNA polymerase alpha subunit (chloroplast) [...   193   1e-47
ref|YP_004935698.1| rpoA gene product (chloroplast) [Sesamum ind...   192   2e-47
gb|ADD31211.1| RNA polymerase alpha subunit protein [Antirrhinum...   191   5e-47
ref|NP_783263.1| RNA polymerase alpha subunit [Atropa belladonna...   191   7e-47
gb|ADD31219.1| RNA polymerase alpha subunit protein [Nerium olea...   189   2e-46

>ref|YP_007353946.1| RNA polymerase alpha subunit (chloroplast) [Tectona grandis]
           gi|438687635|emb|CCP47162.1| RNA polymerase alpha
           subunit (chloroplast) [Tectona grandis]
           gi|438688319|emb|CCP47251.1| RNA polymerase alpha
           subunit (chloroplast) [Tectona grandis]
           gi|438688443|emb|CCP47340.1| RNA polymerase alpha
           subunit (chloroplast) [Tectona grandis]
          Length = 337

 Score =  193 bits (491), Expect = 1e-47
 Identities = 95/98 (96%), Positives = 97/98 (98%)
 Frame = -2

Query: 296 TVSTRTLQWRCVESRTDSKRLYYGRFILSPLLKGQADTIGIAMRRALLGEIEGTCITRVK 117
           TVSTRTLQW+CVESRTDSKRLYYGRFILSPL+KGQADTIGIAMRRALLGEIEGTCITRVK
Sbjct: 7   TVSTRTLQWKCVESRTDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGTCITRVK 66

Query: 116 FENVPHEYSTITGIQESVHEIIMNLKEIVLRSNLYGTC 3
            ENVPHEYSTITGIQESVHEIIMNLKEIVLRSNLYGTC
Sbjct: 67  SENVPHEYSTITGIQESVHEIIMNLKEIVLRSNLYGTC 104


>ref|YP_004935698.1| rpoA gene product (chloroplast) [Sesamum indicum]
           gi|347448327|gb|AEO92738.1| RNA polymerase alpha subunit
           (chloroplast) [Sesamum indicum]
          Length = 337

 Score =  192 bits (489), Expect = 2e-47
 Identities = 94/98 (95%), Positives = 97/98 (98%)
 Frame = -2

Query: 296 TVSTRTLQWRCVESRTDSKRLYYGRFILSPLLKGQADTIGIAMRRALLGEIEGTCITRVK 117
           TVSTRTLQW+CVESRTDSKRLYYGRFILSPL+KGQADTIGIAMRRALLGEIEGTCITRVK
Sbjct: 7   TVSTRTLQWKCVESRTDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGTCITRVK 66

Query: 116 FENVPHEYSTITGIQESVHEIIMNLKEIVLRSNLYGTC 3
            ENVPHEYSTITGIQESVHEI+MNLKEIVLRSNLYGTC
Sbjct: 67  SENVPHEYSTITGIQESVHEILMNLKEIVLRSNLYGTC 104


>gb|ADD31211.1| RNA polymerase alpha subunit protein [Antirrhinum majus]
          Length = 336

 Score =  191 bits (485), Expect = 5e-47
 Identities = 92/98 (93%), Positives = 97/98 (98%)
 Frame = -2

Query: 296 TVSTRTLQWRCVESRTDSKRLYYGRFILSPLLKGQADTIGIAMRRALLGEIEGTCITRVK 117
           TVSTRTLQW+CVESRTDSKRLYYGRFILSPL+KGQADTIGIAMRRALLGEIEGTCITRVK
Sbjct: 7   TVSTRTLQWKCVESRTDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGTCITRVK 66

Query: 116 FENVPHEYSTITGIQESVHEIIMNLKEIVLRSNLYGTC 3
            EN+PHEYSTITGIQESVHEI+MNLKEIVLR+NLYGTC
Sbjct: 67  SENIPHEYSTITGIQESVHEILMNLKEIVLRTNLYGTC 104


>ref|NP_783263.1| RNA polymerase alpha subunit [Atropa belladonna]
           gi|41688712|sp|Q8S8V9.1|RPOA_ATRBE RecName:
           Full=DNA-directed RNA polymerase subunit alpha;
           Short=PEP; AltName: Full=Plastid-encoded RNA polymerase
           subunit alpha; Short=RNA polymerase subunit alpha
           gi|20068363|emb|CAC88076.1| RNA polymerase alpha subunit
           [Atropa belladonna]
          Length = 337

 Score =  191 bits (484), Expect = 7e-47
 Identities = 94/97 (96%), Positives = 96/97 (98%)
 Frame = -2

Query: 296 TVSTRTLQWRCVESRTDSKRLYYGRFILSPLLKGQADTIGIAMRRALLGEIEGTCITRVK 117
           TVSTRTLQW+CVESRTDSKRLYYGRFILSPL+KGQADTIGIAMRRALLGEIEGTCITRVK
Sbjct: 7   TVSTRTLQWKCVESRTDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGTCITRVK 66

Query: 116 FENVPHEYSTITGIQESVHEIIMNLKEIVLRSNLYGT 6
           FE VPHEYSTITGIQESVHEIIMNLKEIVLRSNLYGT
Sbjct: 67  FEKVPHEYSTITGIQESVHEIIMNLKEIVLRSNLYGT 103


>gb|ADD31219.1| RNA polymerase alpha subunit protein [Nerium oleander]
          Length = 337

 Score =  189 bits (480), Expect = 2e-46
 Identities = 92/98 (93%), Positives = 96/98 (97%)
 Frame = -2

Query: 296 TVSTRTLQWRCVESRTDSKRLYYGRFILSPLLKGQADTIGIAMRRALLGEIEGTCITRVK 117
           TVSTRTLQW+CVESRT+SKRLYYGRFILSPLLKGQADTIGIAMRRALLGEIEGTCITRVK
Sbjct: 7   TVSTRTLQWKCVESRTESKRLYYGRFILSPLLKGQADTIGIAMRRALLGEIEGTCITRVK 66

Query: 116 FENVPHEYSTITGIQESVHEIIMNLKEIVLRSNLYGTC 3
           F+ VPHEYSTI GIQESVHEI+MNLKEIVLRSNLYGTC
Sbjct: 67  FDKVPHEYSTIKGIQESVHEILMNLKEIVLRSNLYGTC 104