BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00024141
         (358 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI24510.3| unnamed protein product [Vitis vinifera]              111   5e-23
ref|XP_002268371.1| PREDICTED: cleavage and polyadenylation spec...   111   5e-23
ref|XP_002510905.1| cleavage and polyadenylation specificity fac...   111   5e-23
ref|NP_199979.2| cleavage and polyadenylation specificity factor...    97   1e-18
dbj|BAB11613.1| cleavage and polyadenylation specificity factor ...    97   1e-18

>emb|CBI24510.3| unnamed protein product [Vitis vinifera]
          Length = 1448

 Score =  111 bits (278), Expect = 5e-23
 Identities = 53/89 (59%), Positives = 69/89 (77%)
 Frame = -2

Query: 270 MSYAAFKMMHWATGIEHCASGFITHSAADFSPSIPQVAADDLDSDWPASTKPIGSVPNLV 91
           MSYAA+KMMHW TGIE+CASGF+THS ADF+P I  +  DDL+S+WP + + IG +PNL+
Sbjct: 1   MSYAAYKMMHWPTGIENCASGFVTHSRADFAPQIAPIQTDDLESEWP-TKRQIGPLPNLI 59

Query: 90  TAAANVLEVYTVIVQEESSSPPDCKAAAE 4
             AAN+LEVY V VQE+ S   + +A+AE
Sbjct: 60  VTAANILEVYMVRVQEDDSR--ESRASAE 86


>ref|XP_002268371.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
           1-like [Vitis vinifera]
          Length = 1442

 Score =  111 bits (278), Expect = 5e-23
 Identities = 53/89 (59%), Positives = 69/89 (77%)
 Frame = -2

Query: 270 MSYAAFKMMHWATGIEHCASGFITHSAADFSPSIPQVAADDLDSDWPASTKPIGSVPNLV 91
           MSYAA+KMMHW TGIE+CASGF+THS ADF+P I  +  DDL+S+WP + + IG +PNL+
Sbjct: 1   MSYAAYKMMHWPTGIENCASGFVTHSRADFAPQIAPIQTDDLESEWP-TKRQIGPLPNLI 59

Query: 90  TAAANVLEVYTVIVQEESSSPPDCKAAAE 4
             AAN+LEVY V VQE+ S   + +A+AE
Sbjct: 60  VTAANILEVYMVRVQEDDSR--ESRASAE 86


>ref|XP_002510905.1| cleavage and polyadenylation specificity factor cpsf, putative
           [Ricinus communis] gi|223550020|gb|EEF51507.1| cleavage
           and polyadenylation specificity factor cpsf, putative
           [Ricinus communis]
          Length = 1461

 Score =  111 bits (278), Expect = 5e-23
 Identities = 50/79 (63%), Positives = 61/79 (77%)
 Frame = -2

Query: 270 MSYAAFKMMHWATGIEHCASGFITHSAADFSPSIPQVAADDLDSDWPASTKPIGSVPNLV 91
           MSYAA+KM+HW TGIE CASG+ITHS ADF P IP +  D+LDS+WP S + IG +PNL+
Sbjct: 1   MSYAAYKMLHWPTGIESCASGYITHSRADFVPQIPPIQTDNLDSEWPPSKRGIGPMPNLI 60

Query: 90  TAAANVLEVYTVIVQEESS 34
             A +VLEVY V VQE+ S
Sbjct: 61  VTAGSVLEVYVVRVQEDGS 79


>ref|NP_199979.2| cleavage and polyadenylation specificity factor subunit 1
           [Arabidopsis thaliana]
           gi|290457637|sp|Q9FGR0.2|CPSF1_ARATH RecName:
           Full=Cleavage and polyadenylation specificity factor
           subunit 1; AltName: Full=Cleavage and polyadenylation
           specificity factor 160 kDa subunit; Short=AtCPSF160;
           Short=CPSF 160 kDa subunit gi|332008729|gb|AED96112.1|
           cleavage and polyadenylation specificity factor subunit
           1 [Arabidopsis thaliana]
          Length = 1442

 Score = 97.1 bits (240), Expect = 1e-18
 Identities = 44/81 (54%), Positives = 62/81 (76%), Gaps = 1/81 (1%)
 Frame = -2

Query: 270 MSYAAFKMMHWATGIEHCASGFITHSAADFSPSIPQVAA-DDLDSDWPASTKPIGSVPNL 94
           MS+AA+KMMHW TG+E+CASG+ITHS +D +  IP V+  DD++++WP   + IG +PN+
Sbjct: 1   MSFAAYKMMHWPTGVENCASGYITHSLSDSTLQIPIVSVHDDIEAEWPNPKRGIGPLPNV 60

Query: 93  VTAAANVLEVYTVIVQEESSS 31
           V  AAN+LEVY V  QEE ++
Sbjct: 61  VITAANILEVYIVRAQEEGNT 81


>dbj|BAB11613.1| cleavage and polyadenylation specificity factor subunit
           [Arabidopsis thaliana]
          Length = 1448

 Score = 97.1 bits (240), Expect = 1e-18
 Identities = 44/81 (54%), Positives = 62/81 (76%), Gaps = 1/81 (1%)
 Frame = -2

Query: 270 MSYAAFKMMHWATGIEHCASGFITHSAADFSPSIPQVAA-DDLDSDWPASTKPIGSVPNL 94
           MS+AA+KMMHW TG+E+CASG+ITHS +D +  IP V+  DD++++WP   + IG +PN+
Sbjct: 1   MSFAAYKMMHWPTGVENCASGYITHSLSDSTLQIPIVSVHDDIEAEWPNPKRGIGPLPNV 60

Query: 93  VTAAANVLEVYTVIVQEESSS 31
           V  AAN+LEVY V  QEE ++
Sbjct: 61  VITAANILEVYIVRAQEEGNT 81