BLASTX nr result

ID: Scutellaria23_contig00024072 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00024072
         (302 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278762.1| PREDICTED: pentatricopeptide repeat-containi...   165   4e-39
ref|XP_003610734.1| Pentatricopeptide repeat-containing protein ...   155   4e-36
ref|XP_003538644.1| PREDICTED: pentatricopeptide repeat-containi...   152   4e-35
ref|XP_002315764.1| predicted protein [Populus trichocarpa] gi|2...   143   1e-32
ref|NP_193218.1| pentatricopeptide repeat-containing protein [Ar...   135   4e-30

>ref|XP_002278762.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14820
           [Vitis vinifera] gi|297737070|emb|CBI26271.3| unnamed
           protein product [Vitis vinifera]
          Length = 727

 Score =  165 bits (417), Expect = 4e-39
 Identities = 77/99 (77%), Positives = 85/99 (85%)
 Frame = -1

Query: 302 IWGSLMAACRIHGEFELGEFAAKRLLEIDPDHDGAHVFLSNIYAKEKQWESVGAVRQHMK 123
           IWGSLMAACR+HGE ELGEFAAKRLLE+DPDHDGAHVFLSNIYAK ++WE VG VR+ MK
Sbjct: 526 IWGSLMAACRVHGEIELGEFAAKRLLELDPDHDGAHVFLSNIYAKARRWEDVGQVRKLMK 585

Query: 122 HKGISKERGSSMIEMDNVIHMFLTADRNHKQTDEIYAKL 6
           HKGISKERG S  E++N IH FL ADR+HK  DEIY KL
Sbjct: 586 HKGISKERGCSRFELNNEIHEFLVADRSHKHADEIYEKL 624


>ref|XP_003610734.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355512069|gb|AES93692.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 726

 Score =  155 bits (391), Expect = 4e-36
 Identities = 71/100 (71%), Positives = 86/100 (86%)
 Frame = -1

Query: 302 IWGSLMAACRIHGEFELGEFAAKRLLEIDPDHDGAHVFLSNIYAKEKQWESVGAVRQHMK 123
           IWGSLM+AC++HGE ELGEFAAKRLLE++PDHDGA V LSNIYAKEK+W  VG +R+ M 
Sbjct: 525 IWGSLMSACQVHGEAELGEFAAKRLLELEPDHDGALVVLSNIYAKEKRWNDVGLIRKSMS 584

Query: 122 HKGISKERGSSMIEMDNVIHMFLTADRNHKQTDEIYAKLD 3
           +KGISKE+ SS IE++N +HMF+ ADR HKQ+DEIY KLD
Sbjct: 585 YKGISKEKASSRIEINNQVHMFMMADRYHKQSDEIYEKLD 624


>ref|XP_003538644.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g14820-like [Glycine max]
          Length = 721

 Score =  152 bits (383), Expect = 4e-35
 Identities = 70/100 (70%), Positives = 85/100 (85%)
 Frame = -1

Query: 302 IWGSLMAACRIHGEFELGEFAAKRLLEIDPDHDGAHVFLSNIYAKEKQWESVGAVRQHMK 123
           IWGSLM+AC+ HGE ELGEFAA RLLE++PDHDGA V LSNIYAKEK+W+ VG VR+ MK
Sbjct: 520 IWGSLMSACQNHGEIELGEFAATRLLELEPDHDGALVVLSNIYAKEKRWDDVGLVRKLMK 579

Query: 122 HKGISKERGSSMIEMDNVIHMFLTADRNHKQTDEIYAKLD 3
           HKG+SKE+  S IE++N +H+F+ ADR HKQ+DEIY KLD
Sbjct: 580 HKGVSKEKACSRIEVNNEVHVFMMADRYHKQSDEIYKKLD 619


>ref|XP_002315764.1| predicted protein [Populus trichocarpa] gi|222864804|gb|EEF01935.1|
           predicted protein [Populus trichocarpa]
          Length = 452

 Score =  143 bits (361), Expect = 1e-32
 Identities = 66/100 (66%), Positives = 84/100 (84%)
 Frame = -1

Query: 302 IWGSLMAACRIHGEFELGEFAAKRLLEIDPDHDGAHVFLSNIYAKEKQWESVGAVRQHMK 123
           IWGSLMAAC+IHGE ELGEFAAK++LE++PDHDGA V LSNIYAK+++W+ VG +R  MK
Sbjct: 251 IWGSLMAACQIHGENELGEFAAKQVLELEPDHDGALVQLSNIYAKDRRWQDVGELRNLMK 310

Query: 122 HKGISKERGSSMIEMDNVIHMFLTADRNHKQTDEIYAKLD 3
            +GISKERG S IE++N ++ F+ AD+ HKQ D+IY KLD
Sbjct: 311 QRGISKERGCSRIELNNQVYEFVMADKKHKQADKIYEKLD 350


>ref|NP_193218.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75274931|sp|O23337.1|PP311_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At4g14820 gi|2244839|emb|CAB10261.1| hypothetical
           protein [Arabidopsis thaliana]
           gi|7268228|emb|CAB78524.1| hypothetical protein
           [Arabidopsis thaliana] gi|332658106|gb|AEE83506.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           thaliana]
          Length = 722

 Score =  135 bits (339), Expect = 4e-30
 Identities = 61/100 (61%), Positives = 80/100 (80%)
 Frame = -1

Query: 302 IWGSLMAACRIHGEFELGEFAAKRLLEIDPDHDGAHVFLSNIYAKEKQWESVGAVRQHMK 123
           IWGSLM+ACRIHGE ELG+FAAKR+LE++PDHDGA V +SNIYA+E++WE V  +R+ M+
Sbjct: 515 IWGSLMSACRIHGELELGKFAAKRILELEPDHDGALVLMSNIYAREQRWEDVRNIRRVME 574

Query: 122 HKGISKERGSSMIEMDNVIHMFLTADRNHKQTDEIYAKLD 3
            K + KE+G S I+ +   H FL  D+ HKQ++EIYAKLD
Sbjct: 575 EKNVFKEKGLSRIDQNGKSHEFLIGDKRHKQSNEIYAKLD 614


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