BLASTX nr result

ID: Scutellaria23_contig00024003 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00024003
         (427 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI22109.3| unnamed protein product [Vitis vinifera]              169   2e-40
ref|XP_002279448.1| PREDICTED: pentatricopeptide repeat-containi...   169   2e-40
ref|XP_002313272.1| predicted protein [Populus trichocarpa] gi|2...   167   1e-39
ref|XP_002299968.1| predicted protein [Populus trichocarpa] gi|2...   167   1e-39
ref|XP_002533283.1| pentatricopeptide repeat-containing protein,...   157   1e-36

>emb|CBI22109.3| unnamed protein product [Vitis vinifera]
          Length = 386

 Score =  169 bits (428), Expect = 2e-40
 Identities = 76/141 (53%), Positives = 112/141 (79%)
 Frame = +3

Query: 3   EMELPRVDVVLNRFIYALAKCGHAEDALLVFENMKSLGCEPDLVTYNTVLVILGRLGQVD 182
           E+  PR   +LNR I+A A+C   E +L++F++MKSL C+PDL+TYNTVL  LGR G++D
Sbjct: 195 ELTFPRNATILNRIIHAFAECRQIEKSLIIFDHMKSLKCKPDLITYNTVLGFLGRAGRLD 254

Query: 183 DMLCVFARMRTVDLIPDIVTYNTVLNNLRRMGRLDLCLVHFKEMIERGVQPDVMTFKALI 362
           +ML  F+ M+  ++ PDI++YNT+LN+L+++GRLDLCLV F+EM E G++PD+ T++ALI
Sbjct: 255 EMLHEFSSMKVANIAPDIISYNTLLNSLQKVGRLDLCLVFFREMGENGLKPDLRTYRALI 314

Query: 363 ESLGRSGNIEAALKIFDEMKR 425
           E  G+SGN+E AL++F EMK+
Sbjct: 315 EGFGQSGNLEEALRLFSEMKQ 335


>ref|XP_002279448.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11900-like [Vitis vinifera]
          Length = 357

 Score =  169 bits (428), Expect = 2e-40
 Identities = 76/141 (53%), Positives = 112/141 (79%)
 Frame = +3

Query: 3   EMELPRVDVVLNRFIYALAKCGHAEDALLVFENMKSLGCEPDLVTYNTVLVILGRLGQVD 182
           E+  PR   +LNR I+A A+C   E +L++F++MKSL C+PDL+TYNTVL  LGR G++D
Sbjct: 166 ELTFPRNATILNRIIHAFAECRQIEKSLIIFDHMKSLKCKPDLITYNTVLGFLGRAGRLD 225

Query: 183 DMLCVFARMRTVDLIPDIVTYNTVLNNLRRMGRLDLCLVHFKEMIERGVQPDVMTFKALI 362
           +ML  F+ M+  ++ PDI++YNT+LN+L+++GRLDLCLV F+EM E G++PD+ T++ALI
Sbjct: 226 EMLHEFSSMKVANIAPDIISYNTLLNSLQKVGRLDLCLVFFREMGENGLKPDLRTYRALI 285

Query: 363 ESLGRSGNIEAALKIFDEMKR 425
           E  G+SGN+E AL++F EMK+
Sbjct: 286 EGFGQSGNLEEALRLFSEMKQ 306


>ref|XP_002313272.1| predicted protein [Populus trichocarpa] gi|222849680|gb|EEE87227.1|
           predicted protein [Populus trichocarpa]
          Length = 382

 Score =  167 bits (422), Expect = 1e-39
 Identities = 74/140 (52%), Positives = 110/140 (78%)
 Frame = +3

Query: 3   EMELPRVDVVLNRFIYALAKCGHAEDALLVFENMKSLGCEPDLVTYNTVLVILGRLGQVD 182
           E+  P    V+NRFI+A A+CG  + A+L+FE M++L C+PDLVTYNTVL +LGR G++D
Sbjct: 191 ELTFPSSTKVVNRFIFAFAECGQFDKAILIFEQMENLKCKPDLVTYNTVLDLLGRAGRID 250

Query: 183 DMLCVFARMRTVDLIPDIVTYNTVLNNLRRMGRLDLCLVHFKEMIERGVQPDVMTFKALI 362
           +ML  FA M+   ++PD ++YNT+LN L ++GRLDLC V+F++M+  G++PD++T+ ALI
Sbjct: 251 EMLGEFASMKEAGILPDFISYNTLLNQLTKVGRLDLCSVYFRDMVGNGIEPDLLTYTALI 310

Query: 363 ESLGRSGNIEAALKIFDEMK 422
            S G+SGNIE +L++F+EMK
Sbjct: 311 WSFGQSGNIEESLRLFNEMK 330


>ref|XP_002299968.1| predicted protein [Populus trichocarpa] gi|222847226|gb|EEE84773.1|
           predicted protein [Populus trichocarpa]
          Length = 352

 Score =  167 bits (422), Expect = 1e-39
 Identities = 74/140 (52%), Positives = 110/140 (78%)
 Frame = +3

Query: 3   EMELPRVDVVLNRFIYALAKCGHAEDALLVFENMKSLGCEPDLVTYNTVLVILGRLGQVD 182
           EM  P   +V+NR I+A A+CG  + ALL+F+ M++L C+PDLVTYNTVL +LG  G++D
Sbjct: 161 EMTFPSSMMVVNRIIFAFAECGQFDKALLIFKQMENLKCKPDLVTYNTVLDLLGHAGRID 220

Query: 183 DMLCVFARMRTVDLIPDIVTYNTVLNNLRRMGRLDLCLVHFKEMIERGVQPDVMTFKALI 362
           +MLC FA M+   ++PD ++YNT+LN L ++GRLDLC V+ ++M+E G++PD++T+ ALI
Sbjct: 221 EMLCEFASMKEAGILPDFISYNTLLNQLWKVGRLDLCSVYSRDMVESGIEPDLLTYTALI 280

Query: 363 ESLGRSGNIEAALKIFDEMK 422
            S G+SGNIE +L++F+EMK
Sbjct: 281 GSFGQSGNIEESLRLFNEMK 300



 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 27/93 (29%), Positives = 52/93 (55%)
 Frame = +3

Query: 36  NRFIYALAKCGHAEDALLVFENMKSLGCEPDLVTYNTVLVILGRLGQVDDMLCVFARMRT 215
           N  +  L K G  +   +   +M   G EPDL+TY  ++   G+ G +++ L +F  M+T
Sbjct: 242 NTLLNQLWKVGRLDLCSVYSRDMVESGIEPDLLTYTALIGSFGQSGNIEESLRLFNEMKT 301

Query: 216 VDLIPDIVTYNTVLNNLRRMGRLDLCLVHFKEM 314
             + P I  Y +++ +L++MG+++L +   +EM
Sbjct: 302 KQIRPSIYIYRSLIASLKKMGKVELAMTLLEEM 334


>ref|XP_002533283.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223526886|gb|EEF29094.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 405

 Score =  157 bits (396), Expect = 1e-36
 Identities = 72/140 (51%), Positives = 106/140 (75%)
 Frame = +3

Query: 3   EMELPRVDVVLNRFIYALAKCGHAEDALLVFENMKSLGCEPDLVTYNTVLVILGRLGQVD 182
           E+  PR  VV+NR I+A A+C   + ALL+F+ +K L  +PDL+TYN VL ILGR G+VD
Sbjct: 214 ELAFPRSMVVINRIIFAFAECRQFDKALLIFDQIKDLEYKPDLITYNMVLHILGRAGRVD 273

Query: 183 DMLCVFARMRTVDLIPDIVTYNTVLNNLRRMGRLDLCLVHFKEMIERGVQPDVMTFKALI 362
           +ML  F+ M+   ++PD + YNT+LN L++ GRLDLCLV+ +EM E G++ D++T+ ALI
Sbjct: 274 EMLYEFSSMKEAGIVPDFICYNTLLNQLQKAGRLDLCLVYIREMGESGIEADLLTYTALI 333

Query: 363 ESLGRSGNIEAALKIFDEMK 422
           +S G+SG+IE +L++FD+MK
Sbjct: 334 QSFGKSGHIEESLRLFDDMK 353


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