BLASTX nr result

ID: Scutellaria23_contig00023947 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00023947
         (669 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269953.1| PREDICTED: uncharacterized protein LOC100255...   120   3e-25
ref|XP_004144648.1| PREDICTED: mediator of RNA polymerase II tra...   109   4e-22
ref|XP_002518403.1| conserved hypothetical protein [Ricinus comm...   108   9e-22
ref|NP_001236135.1| uncharacterized protein LOC100306257 [Glycin...   104   1e-20
gb|AFK33474.1| unknown [Lotus japonicus]                              103   2e-20

>ref|XP_002269953.1| PREDICTED: uncharacterized protein LOC100255926 [Vitis vinifera]
           gi|297734129|emb|CBI15376.3| unnamed protein product
           [Vitis vinifera]
          Length = 115

 Score =  120 bits (300), Expect = 3e-25
 Identities = 54/64 (84%), Positives = 61/64 (95%)
 Frame = +2

Query: 2   EFMQLVKDIQMTLREEIKSACEYRPFEKCDYVPRITNEICCKKLEYVLAQLDEMKQTIDE 181
           EFMQL+KDIQMTLR+EIKSACEYRPFEKCDY+ RI+NEICCKKLEYV++QLD MK+TIDE
Sbjct: 51  EFMQLIKDIQMTLRDEIKSACEYRPFEKCDYISRISNEICCKKLEYVISQLDGMKETIDE 110

Query: 182 YGDA 193
           Y DA
Sbjct: 111 YHDA 114


>ref|XP_004144648.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           11-like [Cucumis sativus]
           gi|449504225|ref|XP_004162288.1| PREDICTED: mediator of
           RNA polymerase II transcription subunit 11-like [Cucumis
           sativus]
          Length = 118

 Score =  109 bits (273), Expect = 4e-22
 Identities = 48/61 (78%), Positives = 57/61 (93%)
 Frame = +2

Query: 2   EFMQLVKDIQMTLREEIKSACEYRPFEKCDYVPRITNEICCKKLEYVLAQLDEMKQTIDE 181
           EFMQ +KDIQ+TLR+EIKSACEYRPFEKCDY  RITNE+CCKKLEY++++LD MKQTID+
Sbjct: 51  EFMQFIKDIQVTLRDEIKSACEYRPFEKCDYSSRITNELCCKKLEYMVSKLDGMKQTIDD 110

Query: 182 Y 184
           Y
Sbjct: 111 Y 111


>ref|XP_002518403.1| conserved hypothetical protein [Ricinus communis]
           gi|223542248|gb|EEF43790.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 117

 Score =  108 bits (270), Expect = 9e-22
 Identities = 49/64 (76%), Positives = 57/64 (89%)
 Frame = +2

Query: 2   EFMQLVKDIQMTLREEIKSACEYRPFEKCDYVPRITNEICCKKLEYVLAQLDEMKQTIDE 181
           EFMQ++KDIQ TLR EIKSACEYRPFEKCDY  RI+NEICCKKLEYV++QLD +K +ID+
Sbjct: 53  EFMQMIKDIQFTLRNEIKSACEYRPFEKCDYSCRISNEICCKKLEYVISQLDAIKLSIDQ 112

Query: 182 YGDA 193
           Y DA
Sbjct: 113 YEDA 116


>ref|NP_001236135.1| uncharacterized protein LOC100306257 [Glycine max]
           gi|255628025|gb|ACU14357.1| unknown [Glycine max]
          Length = 115

 Score =  104 bits (260), Expect = 1e-20
 Identities = 47/61 (77%), Positives = 55/61 (90%)
 Frame = +2

Query: 2   EFMQLVKDIQMTLREEIKSACEYRPFEKCDYVPRITNEICCKKLEYVLAQLDEMKQTIDE 181
           EFMQL+KDIQ+ LR+EIKSACEYRPFEKCDY  RI NEIC KK+E++++QLD MKQTIDE
Sbjct: 51  EFMQLIKDIQVALRDEIKSACEYRPFEKCDYGSRIANEICHKKVEFIMSQLDAMKQTIDE 110

Query: 182 Y 184
           Y
Sbjct: 111 Y 111


>gb|AFK33474.1| unknown [Lotus japonicus]
          Length = 115

 Score =  103 bits (258), Expect = 2e-20
 Identities = 47/61 (77%), Positives = 55/61 (90%)
 Frame = +2

Query: 2   EFMQLVKDIQMTLREEIKSACEYRPFEKCDYVPRITNEICCKKLEYVLAQLDEMKQTIDE 181
           EFMQL+KDIQ+ LR+EIKSACEYRPFEKCDY  RI NEIC +K+E+V++QLD MKQTIDE
Sbjct: 51  EFMQLIKDIQVALRDEIKSACEYRPFEKCDYGSRIANEICYQKVEFVMSQLDAMKQTIDE 110

Query: 182 Y 184
           Y
Sbjct: 111 Y 111


Top