BLASTX nr result

ID: Scutellaria23_contig00023945 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00023945
         (476 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002306146.1| predicted protein [Populus trichocarpa] gi|2...   105   3e-21
ref|XP_002513014.1| Ribosome-binding factor A, putative [Ricinus...   104   6e-21
ref|XP_003631582.1| PREDICTED: probable ribosome-binding factor ...   103   1e-20
ref|XP_002270280.1| PREDICTED: probable ribosome-binding factor ...   103   1e-20
ref|XP_004151338.1| PREDICTED: probable ribosome-binding factor ...   101   7e-20

>ref|XP_002306146.1| predicted protein [Populus trichocarpa] gi|222849110|gb|EEE86657.1|
           predicted protein [Populus trichocarpa]
          Length = 166

 Score =  105 bits (263), Expect = 3e-21
 Identities = 54/59 (91%), Positives = 57/59 (96%)
 Frame = +1

Query: 298 RRVKMVAKQIQRELSDMLLTDKVMQYAVLPETALGADRYLSSLTTISDVEISGDLQVVK 474
           RRVKMVAKQIQRELSDMLLTDKV+QYAVLPE ALGAD+YLSSLTTISDVE+S DLQVVK
Sbjct: 5   RRVKMVAKQIQRELSDMLLTDKVLQYAVLPEAALGADKYLSSLTTISDVEVSADLQVVK 63


>ref|XP_002513014.1| Ribosome-binding factor A, putative [Ricinus communis]
           gi|223548025|gb|EEF49517.1| Ribosome-binding factor A,
           putative [Ricinus communis]
          Length = 221

 Score =  104 bits (260), Expect = 6e-21
 Identities = 53/59 (89%), Positives = 57/59 (96%)
 Frame = +1

Query: 298 RRVKMVAKQIQRELSDMLLTDKVMQYAVLPETALGADRYLSSLTTISDVEISGDLQVVK 474
           RRVKMVAKQIQRELSDMLLTDKV+QYA+LPE ALGAD+YLSSLTTISDVE+S DLQVVK
Sbjct: 61  RRVKMVAKQIQRELSDMLLTDKVLQYAILPEAALGADKYLSSLTTISDVEVSTDLQVVK 119


>ref|XP_003631582.1| PREDICTED: probable ribosome-binding factor A, chloroplastic
           isoform 2 [Vitis vinifera]
          Length = 215

 Score =  103 bits (258), Expect = 1e-20
 Identities = 53/59 (89%), Positives = 57/59 (96%)
 Frame = +1

Query: 298 RRVKMVAKQIQRELSDMLLTDKVMQYAVLPETALGADRYLSSLTTISDVEISGDLQVVK 474
           RRVKMVAKQI+RELSDMLLTDKV+Q+AVLPE ALGADRYLSSLTTISDVE+S DLQVVK
Sbjct: 62  RRVKMVAKQIRRELSDMLLTDKVLQFAVLPEAALGADRYLSSLTTISDVEVSADLQVVK 120


>ref|XP_002270280.1| PREDICTED: probable ribosome-binding factor A, chloroplastic
           isoform 1 [Vitis vinifera]
          Length = 223

 Score =  103 bits (258), Expect = 1e-20
 Identities = 53/59 (89%), Positives = 57/59 (96%)
 Frame = +1

Query: 298 RRVKMVAKQIQRELSDMLLTDKVMQYAVLPETALGADRYLSSLTTISDVEISGDLQVVK 474
           RRVKMVAKQI+RELSDMLLTDKV+Q+AVLPE ALGADRYLSSLTTISDVE+S DLQVVK
Sbjct: 62  RRVKMVAKQIRRELSDMLLTDKVLQFAVLPEAALGADRYLSSLTTISDVEVSADLQVVK 120


>ref|XP_004151338.1| PREDICTED: probable ribosome-binding factor A, chloroplastic-like
           [Cucumis sativus] gi|449529960|ref|XP_004171965.1|
           PREDICTED: probable ribosome-binding factor A,
           chloroplastic-like [Cucumis sativus]
          Length = 225

 Score =  101 bits (251), Expect = 7e-20
 Identities = 49/59 (83%), Positives = 57/59 (96%)
 Frame = +1

Query: 298 RRVKMVAKQIQRELSDMLLTDKVMQYAVLPETALGADRYLSSLTTISDVEISGDLQVVK 474
           RR+KMVAKQIQRELSDMLLTDKV+Q+A+LPE +LGAD+YLSSLTTI+DVE+S DLQVVK
Sbjct: 64  RRIKMVAKQIQRELSDMLLTDKVLQFAILPEASLGADKYLSSLTTITDVEVSADLQVVK 122


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