BLASTX nr result
ID: Scutellaria23_contig00023885
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Scutellaria23_contig00023885
(474 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002528032.1| pentatricopeptide repeat-containing protein,... 154 2e-46
ref|XP_003536866.1| PREDICTED: pentatricopeptide repeat-containi... 153 2e-44
ref|XP_003610936.1| Pentatricopeptide repeat-containing protein ... 149 1e-42
ref|XP_002325515.1| predicted protein [Populus trichocarpa] gi|2... 160 1e-37
ref|NP_177305.1| pentatricopeptide repeat-containing protein [Ar... 130 3e-37
>ref|XP_002528032.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223532562|gb|EEF34350.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 730
Score = 154 bits (390), Expect(2) = 2e-46
Identities = 72/119 (60%), Positives = 94/119 (78%)
Frame = +3
Query: 3 NALVSMYGKCGDLETARSIFNKVLVKDEVSWNSIISTYASRGMWDEAFKLFESMQTAGME 182
N+LVSMY K G+L TAR +F +L +D+VSWN++IS YAS+GMW EAF+LF M+ G+E
Sbjct: 233 NSLVSMYAKTGELSTARCLFENMLERDDVSWNTMISGYASKGMWKEAFELFGKMRVEGIE 292
Query: 183 LNIITWNTVAGGCLRTGNFKRALELICQMRIRVHDLDPVAVIIGLSACSHLCALKLDRQ 359
LNIITWNT+AGGC+++GNF+ ALEL+ MR D+D VA IIGL ACSH+ A+KL R+
Sbjct: 293 LNIITWNTIAGGCVQSGNFEEALELLSHMRSYGIDMDSVATIIGLGACSHIGAIKLGRE 351
Score = 56.6 bits (135), Expect(2) = 2e-46
Identities = 24/40 (60%), Positives = 32/40 (80%)
Frame = +2
Query: 353 STEAKSLITWNSIIAGFAQHDRTEEAMFLFRELLLMGIRP 472
ST K++ITWNS+++G+ DR+EEA FLFRE+LL GI P
Sbjct: 390 STRTKNIITWNSMLSGYTHMDRSEEASFLFREMLLSGIEP 429
Score = 59.3 bits (142), Expect(2) = 3e-09
Identities = 29/87 (33%), Positives = 46/87 (52%)
Frame = +3
Query: 3 NALVSMYGKCGDLETARSIFNKVLVKDEVSWNSIISTYASRGMWDEAFKLFESMQTAGME 182
NAL++MY +C L A ++F K+ ++WNS++S Y +EA LF M +G+E
Sbjct: 369 NALITMYSRCKYLRHAYNLFQSTRTKNIITWNSMLSGYTHMDRSEEASFLFREMLLSGIE 428
Query: 183 LNIITWNTVAGGCLRTGNFKRALELIC 263
N +T ++ C R N + E C
Sbjct: 429 PNYVTIASILPLCARVANLQHGKEFHC 455
Score = 26.6 bits (57), Expect(2) = 3e-09
Identities = 13/40 (32%), Positives = 21/40 (52%)
Frame = +2
Query: 353 STEAKSLITWNSIIAGFAQHDRTEEAMFLFRELLLMGIRP 472
S + +T+ S+IAG+ EA+ LF E+ I+P
Sbjct: 492 SISRRDEVTYTSLIAGYGIQGEGREALKLFDEMKKRHIKP 531
>ref|XP_003536866.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g71490-like [Glycine max]
Length = 723
Score = 153 bits (387), Expect(2) = 2e-44
Identities = 71/119 (59%), Positives = 96/119 (80%)
Frame = +3
Query: 3 NALVSMYGKCGDLETARSIFNKVLVKDEVSWNSIISTYASRGMWDEAFKLFESMQTAGME 182
NALVSMYG+ G LE AR +F+ + +D VSWN+IIS YASRG+W EAF+LF SMQ G+E
Sbjct: 221 NALVSMYGRFGKLEIARHLFDNMPRRDSVSWNTIISCYASRGIWKEAFQLFGSMQEEGVE 280
Query: 183 LNIITWNTVAGGCLRTGNFKRALELICQMRIRVHDLDPVAVIIGLSACSHLCALKLDRQ 359
+N+I WNT+AGGCL +GNF+ AL+LI QMR +H LD +A+++GL+ACSH+ A+KL ++
Sbjct: 281 MNVIIWNTIAGGCLHSGNFRGALQLISQMRTSIH-LDAIAMVVGLNACSHIGAIKLGKE 338
Score = 50.8 bits (120), Expect(2) = 2e-44
Identities = 22/39 (56%), Positives = 29/39 (74%)
Frame = +2
Query: 356 TEAKSLITWNSIIAGFAQHDRTEEAMFLFRELLLMGIRP 472
TE K LITWN++++G+A DR EE FLFRE+L G+ P
Sbjct: 378 TEEKGLITWNAMLSGYAHMDRYEEVTFLFREMLQEGMEP 416
Score = 61.2 bits (147), Expect = 8e-08
Identities = 31/87 (35%), Positives = 47/87 (54%)
Frame = +3
Query: 3 NALVSMYGKCGDLETARSIFNKVLVKDEVSWNSIISTYASRGMWDEAFKLFESMQTAGME 182
NAL++MY +C DL A +F++ K ++WN+++S YA ++E LF M GME
Sbjct: 356 NALITMYSRCRDLGHAFILFHRTEEKGLITWNAMLSGYAHMDRYEEVTFLFREMLQEGME 415
Query: 183 LNIITWNTVAGGCLRTGNFKRALELIC 263
N +T +V C R N + E C
Sbjct: 416 PNYVTIASVLPLCARIANLQHGKEFHC 442
>ref|XP_003610936.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355512271|gb|AES93894.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 812
Score = 149 bits (377), Expect(2) = 1e-42
Identities = 72/119 (60%), Positives = 94/119 (78%)
Frame = +3
Query: 3 NALVSMYGKCGDLETARSIFNKVLVKDEVSWNSIISTYASRGMWDEAFKLFESMQTAGME 182
NALV MYG+ G LE AR +F+ + +D+VSWN++IS YASRG+WDEAF+LF M+ AG+E
Sbjct: 232 NALVFMYGRFGKLEVARELFDIMPARDDVSWNTMISCYASRGLWDEAFRLFGCMREAGIE 291
Query: 183 LNIITWNTVAGGCLRTGNFKRALELICQMRIRVHDLDPVAVIIGLSACSHLCALKLDRQ 359
NII WNT+AGGCL TGNFK AL+L QMR V LD VA+++GL+ACSH+ A+KL ++
Sbjct: 292 RNIIIWNTIAGGCLHTGNFKGALKLFSQMR-AVIQLDSVAMVVGLNACSHIGAVKLGKE 349
Score = 48.5 bits (114), Expect(2) = 1e-42
Identities = 20/38 (52%), Positives = 28/38 (73%)
Frame = +2
Query: 359 EAKSLITWNSIIAGFAQHDRTEEAMFLFRELLLMGIRP 472
+ K LITWN++++GFA DR+EE FL RE+L G+ P
Sbjct: 390 DEKGLITWNAMLSGFAHMDRSEEVSFLLREMLREGVEP 427
Score = 56.2 bits (134), Expect(2) = 1e-06
Identities = 28/89 (31%), Positives = 45/89 (50%)
Frame = +3
Query: 3 NALVSMYGKCGDLETARSIFNKVLVKDEVSWNSIISTYASRGMWDEAFKLFESMQTAGME 182
N L++MY +C DL A +F K+ K ++WN+++S +A +E L M G+E
Sbjct: 367 NTLITMYSRCRDLNHAYLLFRKIDEKGLITWNAMLSGFAHMDRSEEVSFLLREMLREGVE 426
Query: 183 LNIITWNTVAGGCLRTGNFKRALELICQM 269
N +T ++ C R N + E C M
Sbjct: 427 PNYVTIASILPLCARIANLQHGKEFHCYM 455
Score = 21.2 bits (43), Expect(2) = 1e-06
Identities = 8/27 (29%), Positives = 16/27 (59%)
Frame = +2
Query: 371 LITWNSIIAGFAQHDRTEEAMFLFREL 451
L+ WNS++ +++ + EA +F L
Sbjct: 466 LLLWNSLVEMYSRSGKVLEARKVFDSL 492
>ref|XP_002325515.1| predicted protein [Populus trichocarpa] gi|222862390|gb|EEE99896.1|
predicted protein [Populus trichocarpa]
Length = 683
Score = 160 bits (405), Expect = 1e-37
Identities = 77/116 (66%), Positives = 95/116 (81%)
Frame = +3
Query: 3 NALVSMYGKCGDLETARSIFNKVLVKDEVSWNSIISTYASRGMWDEAFKLFESMQTAGME 182
N+LVSMYGK G+L+ AR +FN++ +D VSWN IIS YASRG+W EAF+LFE M+ AG E
Sbjct: 182 NSLVSMYGKFGELDAARRLFNQMPERDAVSWNGIISNYASRGLWKEAFELFEEMRLAGAE 241
Query: 183 LNIITWNTVAGGCLRTGNFKRALELICQMRIRVHDLDPVAVIIGLSACSHLCALKL 350
+NIITWNT+AGGC++T NFK ALEL+ QMR DLDPVA+IIGL ACSH+ A+KL
Sbjct: 242 VNIITWNTIAGGCVQTRNFKGALELLSQMRRCDIDLDPVAMIIGLGACSHIGAIKL 297
Score = 62.4 bits (150), Expect(2) = 5e-10
Identities = 31/92 (33%), Positives = 48/92 (52%)
Frame = +3
Query: 3 NALVSMYGKCGDLETARSIFNKVLVKDEVSWNSIISTYASRGMWDEAFKLFESMQTAGME 182
NAL++MY +C DL A +F + K +WNS++S Y +EA LF M +G+E
Sbjct: 318 NALITMYSRCKDLRHADILFKSIKTKSLTTWNSMLSGYTHMDRSEEASFLFREMLFSGIE 377
Query: 183 LNIITWNTVAGGCLRTGNFKRALELICQMRIR 278
N +T ++ C R N ++ E C + R
Sbjct: 378 PNYVTIASILPHCARVANLQQGKEFHCYIMRR 409
Score = 26.2 bits (56), Expect(2) = 5e-10
Identities = 12/40 (30%), Positives = 22/40 (55%)
Frame = +2
Query: 353 STEAKSLITWNSIIAGFAQHDRTEEAMFLFRELLLMGIRP 472
S + +T+ S+IAG+ + A+ LF E++ I+P
Sbjct: 441 SLRRRDKVTYTSLIAGYGIQGEGKTALKLFDEMIKHRIKP 480
>ref|NP_177305.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169720|sp|Q9C9I6.1|PP116_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At1g71490 gi|12323739|gb|AAG51835.1|AC016163_24 unknown
protein; 40702-42747 [Arabidopsis thaliana]
gi|56381899|gb|AAV85668.1| At1g71490 [Arabidopsis
thaliana] gi|56790238|gb|AAW30036.1| At1g71490
[Arabidopsis thaliana] gi|332197086|gb|AEE35207.1|
pentatricopeptide repeat-containing protein [Arabidopsis
thaliana]
Length = 681
Score = 130 bits (328), Expect(2) = 3e-37
Identities = 60/119 (50%), Positives = 90/119 (75%)
Frame = +3
Query: 3 NALVSMYGKCGDLETARSIFNKVLVKDEVSWNSIISTYASRGMWDEAFKLFESMQTAGME 182
NAL+SMY + ++ AR +F+++ +D VSWN++I+ YAS GMW EAF+LF+ M +G+E
Sbjct: 183 NALISMYKRFRNMGIARRLFDRMFERDAVSWNAVINCYASEGMWSEAFELFDKMWFSGVE 242
Query: 183 LNIITWNTVAGGCLRTGNFKRALELICQMRIRVHDLDPVAVIIGLSACSHLCALKLDRQ 359
+++ITWN ++GGCL+TGN+ AL LI +MR LDPVA+IIGL ACS + A++L ++
Sbjct: 243 VSVITWNIISGGCLQTGNYVGALGLISRMRNFPTSLDPVAMIIGLKACSLIGAIRLGKE 301
Score = 49.3 bits (116), Expect(2) = 3e-37
Identities = 22/39 (56%), Positives = 30/39 (76%)
Frame = +2
Query: 356 TEAKSLITWNSIIAGFAQHDRTEEAMFLFRELLLMGIRP 472
TE SL TWNSII+G+AQ +++EEA L RE+L+ G +P
Sbjct: 341 TEENSLCTWNSIISGYAQLNKSEEASHLLREMLVAGFQP 379
Score = 59.3 bits (142), Expect = 3e-07
Identities = 32/87 (36%), Positives = 42/87 (48%)
Frame = +3
Query: 3 NALVSMYGKCGDLETARSIFNKVLVKDEVSWNSIISTYASRGMWDEAFKLFESMQTAGME 182
N L++MY KC DL A +F + +WNSIIS YA +EA L M AG +
Sbjct: 319 NTLITMYSKCKDLRHALIVFRQTEENSLCTWNSIISGYAQLNKSEEASHLLREMLVAGFQ 378
Query: 183 LNIITWNTVAGGCLRTGNFKRALELIC 263
N IT ++ C R N + E C
Sbjct: 379 PNSITLASILPLCARIANLQHGKEFHC 405