BLASTX nr result

ID: Scutellaria23_contig00023880 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00023880
         (749 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAJ38374.1| transcription initiation factor [Plantago major]      199   4e-49
emb|CBI19296.3| unnamed protein product [Vitis vinifera]              186   3e-45
ref|XP_002527359.1| transcription initiation factor iia (tfiia),...   184   1e-44
ref|XP_002285630.1| PREDICTED: transcription initiation factor I...   184   1e-44
ref|XP_003544835.1| PREDICTED: transcription initiation factor I...   184   2e-44

>emb|CAJ38374.1| transcription initiation factor [Plantago major]
          Length = 114

 Score =  199 bits (507), Expect = 4e-49
 Identities = 98/106 (92%), Positives = 103/106 (97%)
 Frame = -2

Query: 604 MATFELYRRSTIGMCLTETLDQMVSGGTLSPEFAIQVLIQFDKSMTEALESEVKSKVSVK 425
           MATFELYRRSTIGMCLTETLDQMVS G LSPE AIQVLIQFDKSMTEALESEVKSKVS+K
Sbjct: 9   MATFELYRRSTIGMCLTETLDQMVSSGVLSPELAIQVLIQFDKSMTEALESEVKSKVSIK 68

Query: 424 GHLHTYRFCDNVWTFILQNAQIKSEEGQETVDSVKIVACDSKLLTQ 287
           GHLHTYRFCDNVWTFI+QNAQ+KSEEGQETV++VKIVACDSKLLTQ
Sbjct: 69  GHLHTYRFCDNVWTFIVQNAQLKSEEGQETVETVKIVACDSKLLTQ 114


>emb|CBI19296.3| unnamed protein product [Vitis vinifera]
          Length = 163

 Score =  186 bits (473), Expect = 3e-45
 Identities = 91/107 (85%), Positives = 98/107 (91%)
 Frame = -2

Query: 607 RMATFELYRRSTIGMCLTETLDQMVSGGTLSPEFAIQVLIQFDKSMTEALESEVKSKVSV 428
           RMATFELYRRSTIGMCLTETLD+MV  GTLSPE AIQVL+QFDKSMTEALES+VKSKV++
Sbjct: 57  RMATFELYRRSTIGMCLTETLDEMVQNGTLSPELAIQVLVQFDKSMTEALESQVKSKVTI 116

Query: 427 KGHLHTYRFCDNVWTFILQNAQIKSEEGQETVDSVKIVACDSKLLTQ 287
           KGHLHTYRFCDNVWTFILQ+A  K+EE QE V  VKIVACDSKLLTQ
Sbjct: 117 KGHLHTYRFCDNVWTFILQDALFKNEESQENVGRVKIVACDSKLLTQ 163


>ref|XP_002527359.1| transcription initiation factor iia (tfiia), gamma chain, putative
           [Ricinus communis] gi|223533278|gb|EEF35031.1|
           transcription initiation factor iia (tfiia), gamma
           chain, putative [Ricinus communis]
          Length = 106

 Score =  184 bits (468), Expect = 1e-44
 Identities = 90/106 (84%), Positives = 97/106 (91%)
 Frame = -2

Query: 604 MATFELYRRSTIGMCLTETLDQMVSGGTLSPEFAIQVLIQFDKSMTEALESEVKSKVSVK 425
           MATFELYRRSTIGMCLTETLD+MV  GTLSPE AIQVL+QFDKSMTEALES+VKSKVS+K
Sbjct: 1   MATFELYRRSTIGMCLTETLDEMVQSGTLSPELAIQVLVQFDKSMTEALESQVKSKVSIK 60

Query: 424 GHLHTYRFCDNVWTFILQNAQIKSEEGQETVDSVKIVACDSKLLTQ 287
           GHLHTYRFCDNVWTFILQ+A  K+E+ QE V  VKIVACDSKLLTQ
Sbjct: 61  GHLHTYRFCDNVWTFILQDALFKNEDSQENVGRVKIVACDSKLLTQ 106


>ref|XP_002285630.1| PREDICTED: transcription initiation factor IIA subunit 2 isoform 1
           [Vitis vinifera] gi|359492969|ref|XP_003634490.1|
           PREDICTED: transcription initiation factor IIA subunit 2
           isoform 2 [Vitis vinifera] gi|147775910|emb|CAN60284.1|
           hypothetical protein VITISV_015528 [Vitis vinifera]
          Length = 106

 Score =  184 bits (468), Expect = 1e-44
 Identities = 90/106 (84%), Positives = 97/106 (91%)
 Frame = -2

Query: 604 MATFELYRRSTIGMCLTETLDQMVSGGTLSPEFAIQVLIQFDKSMTEALESEVKSKVSVK 425
           MATFELYRRSTIGMCLTETLD+MV  GTLSPE AIQVL+QFDKSMTEALES+VKSKV++K
Sbjct: 1   MATFELYRRSTIGMCLTETLDEMVQNGTLSPELAIQVLVQFDKSMTEALESQVKSKVTIK 60

Query: 424 GHLHTYRFCDNVWTFILQNAQIKSEEGQETVDSVKIVACDSKLLTQ 287
           GHLHTYRFCDNVWTFILQ+A  K+EE QE V  VKIVACDSKLLTQ
Sbjct: 61  GHLHTYRFCDNVWTFILQDALFKNEESQENVGRVKIVACDSKLLTQ 106


>ref|XP_003544835.1| PREDICTED: transcription initiation factor IIA subunit 2-like
           [Glycine max]
          Length = 106

 Score =  184 bits (467), Expect = 2e-44
 Identities = 90/106 (84%), Positives = 97/106 (91%)
 Frame = -2

Query: 604 MATFELYRRSTIGMCLTETLDQMVSGGTLSPEFAIQVLIQFDKSMTEALESEVKSKVSVK 425
           MATFELYRRSTIGMCLTETLD+MV  GTLSPE AIQVL+QFDKSMTEALE++VKSKVS+K
Sbjct: 1   MATFELYRRSTIGMCLTETLDEMVQNGTLSPELAIQVLVQFDKSMTEALETQVKSKVSIK 60

Query: 424 GHLHTYRFCDNVWTFILQNAQIKSEEGQETVDSVKIVACDSKLLTQ 287
           GHLHTYRFCDNVWTFILQ+A  KSE+ QE V  VKIVACDSKLLTQ
Sbjct: 61  GHLHTYRFCDNVWTFILQDALFKSEDSQEIVGRVKIVACDSKLLTQ 106


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