BLASTX nr result

ID: Scutellaria23_contig00023633 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00023633
         (297 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275952.1| PREDICTED: pentatricopeptide repeat-containi...   136   2e-30
ref|XP_002319139.1| predicted protein [Populus trichocarpa] gi|2...   136   2e-30
ref|XP_004133786.1| PREDICTED: pentatricopeptide repeat-containi...   133   1e-29
ref|XP_002871645.1| pentatricopeptide repeat-containing protein ...   129   2e-28
ref|NP_197005.2| pentatricopeptide repeat-containing protein [Ar...   128   6e-28

>ref|XP_002275952.1| PREDICTED: pentatricopeptide repeat-containing protein At5g15010,
           mitochondrial-like [Vitis vinifera]
          Length = 566

 Score =  136 bits (343), Expect = 2e-30
 Identities = 61/98 (62%), Positives = 78/98 (79%)
 Frame = -3

Query: 295 FPFTTKSFNIILNGWCNVVGDLREAQRIWKEMERRGIRHDAYSFSSIMTCHSKFNHLNVV 116
           FPF TKSFNIILNGWCNV+G +REA+R W+EM  RGI+ D  S+SSI++C+SK  +LN V
Sbjct: 250 FPFDTKSFNIILNGWCNVIGSMREAERFWREMSNRGIQRDVVSYSSIISCYSKVTNLNKV 309

Query: 115 LRFYEKMKALGIKPDRKVYNAVIHALAKQRLIKEARSL 2
           L+ + +MK + I PDRKVYNAV+HALAK   +KEA +L
Sbjct: 310 LKLFNQMKEMEIAPDRKVYNAVVHALAKASFVKEALNL 347


>ref|XP_002319139.1| predicted protein [Populus trichocarpa] gi|222857515|gb|EEE95062.1|
           predicted protein [Populus trichocarpa]
          Length = 518

 Score =  136 bits (342), Expect = 2e-30
 Identities = 61/98 (62%), Positives = 80/98 (81%)
 Frame = -3

Query: 295 FPFTTKSFNIILNGWCNVVGDLREAQRIWKEMERRGIRHDAYSFSSIMTCHSKFNHLNVV 116
           FP  TKSFNI+LNGWCN++G  RE++R+W+EM +RGIR D  S++S+M+C+SK   L  V
Sbjct: 192 FPLNTKSFNIVLNGWCNLIGSPRESERVWREMSKRGIRFDVVSYASMMSCYSKAGSLYRV 251

Query: 115 LRFYEKMKALGIKPDRKVYNAVIHALAKQRLIKEARSL 2
           LR Y++MK +GI+PDRKVYNAVIHALAK RL+ EA +L
Sbjct: 252 LRLYKQMKKIGIEPDRKVYNAVIHALAKGRLVNEAFNL 289


>ref|XP_004133786.1| PREDICTED: pentatricopeptide repeat-containing protein At5g15010,
           mitochondrial-like [Cucumis sativus]
           gi|449477985|ref|XP_004155184.1| PREDICTED:
           pentatricopeptide repeat-containing protein At5g15010,
           mitochondrial-like [Cucumis sativus]
          Length = 485

 Score =  133 bits (335), Expect = 1e-29
 Identities = 63/98 (64%), Positives = 78/98 (79%)
 Frame = -3

Query: 295 FPFTTKSFNIILNGWCNVVGDLREAQRIWKEMERRGIRHDAYSFSSIMTCHSKFNHLNVV 116
           FPF TKSFNIILNGWC V+G LR+ +R+WKEM RRGI HDA S++S ++C+SK  +L+ V
Sbjct: 180 FPFNTKSFNIILNGWC-VIGSLRDTERVWKEMTRRGISHDAVSYASCISCYSKVRNLHKV 238

Query: 115 LRFYEKMKALGIKPDRKVYNAVIHALAKQRLIKEARSL 2
           LR +E MK + I PDRKVYNAVIH+LAK R +KEA  L
Sbjct: 239 LRLFEDMKRMKIDPDRKVYNAVIHSLAKGRCLKEAADL 276


>ref|XP_002871645.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297317482|gb|EFH47904.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 524

 Score =  129 bits (325), Expect = 2e-28
 Identities = 57/98 (58%), Positives = 76/98 (77%)
 Frame = -3

Query: 295 FPFTTKSFNIILNGWCNVVGDLREAQRIWKEMERRGIRHDAYSFSSIMTCHSKFNHLNVV 116
           +PF  KSFNI+LNGWCNV+G  REA+R+W EM   G++HD  S+SS+++C+SK   LN V
Sbjct: 211 YPFDAKSFNIVLNGWCNVIGSPREAERVWMEMGNVGVKHDVVSYSSMISCYSKGGSLNKV 270

Query: 115 LRFYEKMKALGIKPDRKVYNAVIHALAKQRLIKEARSL 2
           L+ +++MK   I+PDRKVYNAVIHALAK   + EAR+L
Sbjct: 271 LKLFDRMKKESIEPDRKVYNAVIHALAKASFVSEARNL 308


>ref|NP_197005.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|223635761|sp|Q9LFQ4.2|PP383_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At5g15010, mitochondrial; Flags: Precursor
           gi|332004721|gb|AED92104.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 572

 Score =  128 bits (321), Expect = 6e-28
 Identities = 56/98 (57%), Positives = 76/98 (77%)
 Frame = -3

Query: 295 FPFTTKSFNIILNGWCNVVGDLREAQRIWKEMERRGIRHDAYSFSSIMTCHSKFNHLNVV 116
           +PF  KSFNI+LNGWCNV+G  REA+R+W EM   G++HD  S+SS+++C+SK   LN V
Sbjct: 262 YPFDAKSFNIVLNGWCNVIGSPREAERVWMEMGNVGVKHDVVSYSSMISCYSKGGSLNKV 321

Query: 115 LRFYEKMKALGIKPDRKVYNAVIHALAKQRLIKEARSL 2
           L+ +++MK   I+PDRKVYNAV+HALAK   + EAR+L
Sbjct: 322 LKLFDRMKKECIEPDRKVYNAVVHALAKASFVSEARNL 359


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