BLASTX nr result

ID: Scutellaria23_contig00023612 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00023612
         (321 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003633196.1| PREDICTED: general transcription factor IIE ...   134   6e-30
ref|XP_004138223.1| PREDICTED: general transcription factor IIE ...   129   2e-28
ref|XP_002314760.1| predicted protein [Populus trichocarpa] gi|2...   125   3e-27
ref|XP_002331723.1| predicted protein [Populus trichocarpa] gi|2...   123   2e-26
gb|ABR16597.1| unknown [Picea sitchensis]                             116   2e-24

>ref|XP_003633196.1| PREDICTED: general transcription factor IIE subunit 1-like [Vitis
           vinifera] gi|297735317|emb|CBI17757.3| unnamed protein
           product [Vitis vinifera]
          Length = 475

 Score =  134 bits (338), Expect = 6e-30
 Identities = 69/107 (64%), Positives = 80/107 (74%), Gaps = 2/107 (1%)
 Frame = +1

Query: 1   IPEFGSLIAWELRANASGRGSNGDLNANDPSKSLHGFGFGGTPMPYVGETKVEVAFS--G 174
           +PEFGSL AWE RANA+GR +NGD NAND SKS  G GFGGTPMP+VGETKVEVAFS  G
Sbjct: 247 VPEFGSLQAWEARANAAGRAANGDSNANDSSKSSQGLGFGGTPMPFVGETKVEVAFSGVG 306

Query: 175 DDKGDVKSLNSSTPQKVLPPWMIKKEMKLTKEQLGQTSVEAKKGDNS 315
             + D KS  ++   KVLPPWMIK+ M LTKEQ G+   E+K G +S
Sbjct: 307 VKEEDSKSEIANASLKVLPPWMIKEGMNLTKEQRGEIKQESKMGSSS 353


>ref|XP_004138223.1| PREDICTED: general transcription factor IIE subunit 1-like [Cucumis
           sativus]
          Length = 475

 Score =  129 bits (325), Expect = 2e-28
 Identities = 66/102 (64%), Positives = 78/102 (76%), Gaps = 2/102 (1%)
 Frame = +1

Query: 1   IPEFGSLIAWELRANASGRGSNGDLNANDPSKSLHGFGFGGTPMPYVGETKVEVAFSGDD 180
           +PEFG+L+AWE RA+A+ RG NGDLN NDPSKS    G+GGTPMP+VGETKVEVAFSG +
Sbjct: 248 VPEFGTLLAWEARASAAARGINGDLNGNDPSKSSQ--GYGGTPMPFVGETKVEVAFSGAE 305

Query: 181 KG--DVKSLNSSTPQKVLPPWMIKKEMKLTKEQLGQTSVEAK 300
               D KS + +T  KVLPPWMIKK M LTKEQ G+   E+K
Sbjct: 306 GTGVDAKSESENTSLKVLPPWMIKKGMNLTKEQRGEVKDESK 347


>ref|XP_002314760.1| predicted protein [Populus trichocarpa] gi|222863800|gb|EEF00931.1|
           predicted protein [Populus trichocarpa]
          Length = 429

 Score =  125 bits (315), Expect = 3e-27
 Identities = 63/108 (58%), Positives = 80/108 (74%), Gaps = 1/108 (0%)
 Frame = +1

Query: 1   IPEFGSLIAWELRANASGRGSNGDLNANDPSKSLHGFGFGGTPMPYVGETKVEVAFSGDD 180
           IPE GSL AW+L  NA+GR +NGD N++D  K   G G+GGTPMP++GETKVEVAF+GD+
Sbjct: 214 IPEIGSLQAWQLHENAAGRATNGDPNSDDHFKYSQGPGYGGTPMPFLGETKVEVAFAGDE 273

Query: 181 -KGDVKSLNSSTPQKVLPPWMIKKEMKLTKEQLGQTSVEAKKGDNSIA 321
            K ++KS  +ST  KVLPPWMIK+ M LTKEQ G+   E+K   +S A
Sbjct: 274 SKENIKSETASTSLKVLPPWMIKQGMNLTKEQRGEVKQESKMDSSSTA 321


>ref|XP_002331723.1| predicted protein [Populus trichocarpa] gi|222874815|gb|EEF11946.1|
           predicted protein [Populus trichocarpa]
          Length = 472

 Score =  123 bits (308), Expect = 2e-26
 Identities = 62/108 (57%), Positives = 81/108 (75%), Gaps = 1/108 (0%)
 Frame = +1

Query: 1   IPEFGSLIAWELRANASGRGSNGDLNANDPSKSLHGFGFGGTPMPYVGETKVEVAFSG-D 177
           +PEFGSL  W++ A+A+GR +NGD + NDPS+S    G+GGTPMP++GETKVEV+FSG +
Sbjct: 247 VPEFGSLQEWQIHASAAGRAANGDSSYNDPSRSSQ--GYGGTPMPFLGETKVEVSFSGVE 304

Query: 178 DKGDVKSLNSSTPQKVLPPWMIKKEMKLTKEQLGQTSVEAKKGDNSIA 321
            K D+KS  +ST  KVLPPWMIK+ M LTKEQ G+    +K  D+S A
Sbjct: 305 GKEDLKSETASTGLKVLPPWMIKQGMNLTKEQRGEVKQGSKMDDSSAA 352


>gb|ABR16597.1| unknown [Picea sitchensis]
          Length = 480

 Score =  116 bits (291), Expect = 2e-24
 Identities = 62/106 (58%), Positives = 72/106 (67%), Gaps = 6/106 (5%)
 Frame = +1

Query: 1   IPEFGSLIAWELRANASGRGSNGDLNANDPSKSLHGFGFGGTPMPYVGETKVEVAFSG-- 174
           +PEFGSL+ WE RA A+GR  +GD NAN+ SKS  G GFGGTPMP++GETKVEVA SG  
Sbjct: 248 VPEFGSLLQWEARAIAAGRAVSGDTNANESSKSSQGQGFGGTPMPFLGETKVEVALSGME 307

Query: 175 ----DDKGDVKSLNSSTPQKVLPPWMIKKEMKLTKEQLGQTSVEAK 300
               D K DV SL      KVLPPWMI++ M LT EQ G+   E K
Sbjct: 308 VKAEDSKEDVASL------KVLPPWMIRQGMNLTNEQRGEVKQELK 347


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