BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00023549
         (292 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002516387.1| prokaryotic DNA topoisomerase, putative [Ric...   114   1e-23
ref|NP_180760.2| DNA topoisomerase III [Arabidopsis thaliana] gi...   113   1e-23
gb|AAD15404.1| putative DNA topoisomerase III beta [Arabidopsis ...   113   2e-23
ref|XP_002264970.2| PREDICTED: DNA topoisomerase 3-beta-1-like [...   112   2e-23
ref|XP_002881210.1| DNA topoisomerase family protein [Arabidopsi...   112   2e-23

>ref|XP_002516387.1| prokaryotic DNA topoisomerase, putative [Ricinus communis]
           gi|223544485|gb|EEF46004.1| prokaryotic DNA
           topoisomerase, putative [Ricinus communis]
          Length = 865

 Score =  114 bits (284), Expect = 1e-23
 Identities = 51/74 (68%), Positives = 60/74 (81%)
 Frame = -3

Query: 290 SVLSGGRMSTRRGSTEVHEFEGTFLGFPVFYKVTSVIGHVFSVDFPARYQDWNATNPLDL 111
           S LS G+MS+++G TEVHEF+G FLGF   YKVTSVIGH+FSVDFP +YQDW A +P+DL
Sbjct: 21  SALSHGQMSSKKGGTEVHEFDGMFLGFQAHYKVTSVIGHIFSVDFPQKYQDWTANDPMDL 80

Query: 110 FDAPTVKTESTPKV 69
           F AP VK ES PKV
Sbjct: 81  FQAPIVKAESNPKV 94


>ref|NP_180760.2| DNA topoisomerase III [Arabidopsis thaliana]
           gi|330253525|gb|AEC08619.1| DNA topoisomerase III
           [Arabidopsis thaliana]
          Length = 865

 Score =  113 bits (283), Expect = 1e-23
 Identities = 55/85 (64%), Positives = 63/85 (74%)
 Frame = -3

Query: 290 SVLSGGRMSTRRGSTEVHEFEGTFLGFPVFYKVTSVIGHVFSVDFPARYQDWNATNPLDL 111
           SVLS G+MSTRRGSTEVHEF+G F GF   Y+VTSVIGHVFSVDFP +YQ+W   +P DL
Sbjct: 22  SVLSHGQMSTRRGSTEVHEFDGMFRGFKAHYRVTSVIGHVFSVDFPEKYQNWATIDPQDL 81

Query: 110 FDAPTVKTESTPKVF*SFHVVNYDR 36
           FDAP +K ES PK     H+ N  R
Sbjct: 82  FDAPIIKKESNPKAHICRHLSNEAR 106


>gb|AAD15404.1| putative DNA topoisomerase III beta [Arabidopsis thaliana]
          Length = 836

 Score =  113 bits (282), Expect = 2e-23
 Identities = 53/74 (71%), Positives = 60/74 (81%)
 Frame = -3

Query: 290 SVLSGGRMSTRRGSTEVHEFEGTFLGFPVFYKVTSVIGHVFSVDFPARYQDWNATNPLDL 111
           SVLS G+MSTRRGSTEVHEF+G F GF   Y+VTSVIGHVFSVDFP +YQ+W   +P DL
Sbjct: 52  SVLSHGQMSTRRGSTEVHEFDGMFRGFKAHYRVTSVIGHVFSVDFPEKYQNWATIDPQDL 111

Query: 110 FDAPTVKTESTPKV 69
           FDAP +K ES PKV
Sbjct: 112 FDAPIIKKESNPKV 125


>ref|XP_002264970.2| PREDICTED: DNA topoisomerase 3-beta-1-like [Vitis vinifera]
          Length = 894

 Score =  112 bits (281), Expect = 2e-23
 Identities = 56/75 (74%), Positives = 59/75 (78%), Gaps = 2/75 (2%)
 Frame = -3

Query: 290 SVLSGGRMSTRRG--STEVHEFEGTFLGFPVFYKVTSVIGHVFSVDFPARYQDWNATNPL 117
           S LSGG MSTRRG  STEVHEF GTF G    YKVTSVIGHVFSVDFPA+YQDW  T+PL
Sbjct: 47  SALSGGHMSTRRGGSSTEVHEFNGTFRGSNAQYKVTSVIGHVFSVDFPAKYQDWTVTDPL 106

Query: 116 DLFDAPTVKTESTPK 72
           DLF AP +K ES PK
Sbjct: 107 DLFQAPILKAESNPK 121


>ref|XP_002881210.1| DNA topoisomerase family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297327049|gb|EFH57469.1| DNA topoisomerase family
           protein [Arabidopsis lyrata subsp. lyrata]
          Length = 865

 Score =  112 bits (281), Expect = 2e-23
 Identities = 55/85 (64%), Positives = 63/85 (74%)
 Frame = -3

Query: 290 SVLSGGRMSTRRGSTEVHEFEGTFLGFPVFYKVTSVIGHVFSVDFPARYQDWNATNPLDL 111
           SVLS G+MSTRRGSTEVHEF+G F GF   Y+VTSVIGHVFSVDFP +YQ+W   +P DL
Sbjct: 22  SVLSHGQMSTRRGSTEVHEFDGMFRGFKAHYRVTSVIGHVFSVDFPEKYQNWATIDPQDL 81

Query: 110 FDAPTVKTESTPKVF*SFHVVNYDR 36
           FDAP +K ES PK     H+ N  R
Sbjct: 82  FDAPILKKESNPKAHICRHLSNEAR 106