BLASTX nr result

ID: Scutellaria23_contig00023547 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00023547
         (211 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AEL98901.1| WD repeat-containing protein LWD1, partial [Silen...    80   3e-16
ref|XP_003624554.1| WD repeat protein [Medicago truncatula] gi|3...    79   1e-15
gb|AFK49516.1| unknown [Medicago truncatula]                           79   1e-15
gb|AAC18912.1| ATAN11 [Arabidopsis thaliana]                           79   1e-15
ref|NP_172751.1| WD repeat-containing protein LWD1 [Arabidopsis ...    79   1e-15

>gb|AEL98901.1| WD repeat-containing protein LWD1, partial [Silene latifolia]
           gi|343172396|gb|AEL98902.1| WD repeat-containing protein
           LWD1, partial [Silene latifolia]
          Length = 338

 Score = 80.1 bits (196), Expect(2) = 3e-16
 Identities = 35/48 (72%), Positives = 42/48 (87%)
 Frame = +1

Query: 67  DVAWGGAAIFTSVSADGSVRRFDLRDKEHSQIIYETADPNPPLMRLEW 210
           D+AWGGA +F SVSADGSVR FDLRDKEHS IIYE+++P+ PL+RL W
Sbjct: 175 DIAWGGAGVFASVSADGSVRVFDLRDKEHSTIIYESSEPDTPLVRLGW 222



 Score = 29.6 bits (65), Expect(2) = 3e-16
 Identities = 15/33 (45%), Positives = 19/33 (57%), Gaps = 9/33 (27%)
 Frame = +2

Query: 2   LKRAFDGHQGS---------DWNEADPRRIATS 73
           LK   +G++ S         DWNEA+PRRI TS
Sbjct: 114 LKTTLNGNKNSEYCGPLTSFDWNEAEPRRIGTS 146


>ref|XP_003624554.1| WD repeat protein [Medicago truncatula] gi|355499569|gb|AES80772.1|
           WD repeat protein [Medicago truncatula]
          Length = 513

 Score = 78.6 bits (192), Expect(2) = 1e-15
 Identities = 34/48 (70%), Positives = 41/48 (85%)
 Frame = +1

Query: 67  DVAWGGAAIFTSVSADGSVRRFDLRDKEHSQIIYETADPNPPLMRLEW 210
           D+AWGG  +F SVSADGSVR FDLRDKEHS IIYE+++P+ PL+RL W
Sbjct: 189 DIAWGGVGVFASVSADGSVRVFDLRDKEHSTIIYESSEPDTPLVRLGW 236



 Score = 29.3 bits (64), Expect(2) = 1e-15
 Identities = 11/13 (84%), Positives = 12/13 (92%)
 Frame = +2

Query: 35  DWNEADPRRIATS 73
           DWNEA+PRRI TS
Sbjct: 148 DWNEAEPRRIGTS 160


>gb|AFK49516.1| unknown [Medicago truncatula]
          Length = 352

 Score = 78.6 bits (192), Expect(2) = 1e-15
 Identities = 34/48 (70%), Positives = 41/48 (85%)
 Frame = +1

Query: 67  DVAWGGAAIFTSVSADGSVRRFDLRDKEHSQIIYETADPNPPLMRLEW 210
           D+AWGG  +F SVSADGSVR FDLRDKEHS IIYE+++P+ PL+RL W
Sbjct: 189 DIAWGGVGVFASVSADGSVRVFDLRDKEHSTIIYESSEPDTPLVRLGW 236



 Score = 29.3 bits (64), Expect(2) = 1e-15
 Identities = 11/13 (84%), Positives = 12/13 (92%)
 Frame = +2

Query: 35  DWNEADPRRIATS 73
           DWNEA+PRRI TS
Sbjct: 148 DWNEAEPRRIGTS 160


>gb|AAC18912.1| ATAN11 [Arabidopsis thaliana]
          Length = 346

 Score = 78.6 bits (192), Expect(2) = 1e-15
 Identities = 34/48 (70%), Positives = 41/48 (85%)
 Frame = +1

Query: 67  DVAWGGAAIFTSVSADGSVRRFDLRDKEHSQIIYETADPNPPLMRLEW 210
           D+AWGG  +F SVSADGSVR FDLRDKEHS IIYE+++P+ PL+RL W
Sbjct: 183 DIAWGGVGVFASVSADGSVRVFDLRDKEHSTIIYESSEPDTPLVRLGW 230



 Score = 29.3 bits (64), Expect(2) = 1e-15
 Identities = 11/13 (84%), Positives = 12/13 (92%)
 Frame = +2

Query: 35  DWNEADPRRIATS 73
           DWNEA+PRRI TS
Sbjct: 142 DWNEAEPRRIGTS 154


>ref|NP_172751.1| WD repeat-containing protein LWD1 [Arabidopsis thaliana]
           gi|75335308|sp|Q9LPV9.1|LWD1_ARATH RecName: Full=WD
           repeat-containing protein LWD1; AltName: Full=Protein
           ANTHOCYANIN 11-A; Short=AtAN11-A; AltName: Full=Protein
           LIGHT-REGULATED WD1; AltName: Full=WD repeat-containing
           protein AN11-A gi|8698737|gb|AAF78495.1|AC012187_15
           Identical to WD repeat protein ATAN11 from Arabidopsis
           thaliana gb|U94746 and contains multiple WD domain
           PF|00400 repeats. ESTs gb|H35958, gb|AA712360,
           gb|R90717, gb|AW004301 come from this gene [Arabidopsis
           thaliana] gi|20260404|gb|AAM13100.1| WD repeat protein
           ATAN11 [Arabidopsis thaliana] gi|22136196|gb|AAM91176.1|
           WD repeat protein ATAN11 [Arabidopsis thaliana]
           gi|332190827|gb|AEE28948.1| WD repeat-containing protein
           LWD1 [Arabidopsis thaliana]
          Length = 346

 Score = 78.6 bits (192), Expect(2) = 1e-15
 Identities = 34/48 (70%), Positives = 41/48 (85%)
 Frame = +1

Query: 67  DVAWGGAAIFTSVSADGSVRRFDLRDKEHSQIIYETADPNPPLMRLEW 210
           D+AWGG  +F SVSADGSVR FDLRDKEHS IIYE+++P+ PL+RL W
Sbjct: 183 DIAWGGVGVFASVSADGSVRVFDLRDKEHSTIIYESSEPDTPLVRLGW 230



 Score = 29.3 bits (64), Expect(2) = 1e-15
 Identities = 11/13 (84%), Positives = 12/13 (92%)
 Frame = +2

Query: 35  DWNEADPRRIATS 73
           DWNEA+PRRI TS
Sbjct: 142 DWNEAEPRRIGTS 154


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