BLASTX nr result
ID: Scutellaria23_contig00023547
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Scutellaria23_contig00023547 (211 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|AEL98901.1| WD repeat-containing protein LWD1, partial [Silen... 80 3e-16 ref|XP_003624554.1| WD repeat protein [Medicago truncatula] gi|3... 79 1e-15 gb|AFK49516.1| unknown [Medicago truncatula] 79 1e-15 gb|AAC18912.1| ATAN11 [Arabidopsis thaliana] 79 1e-15 ref|NP_172751.1| WD repeat-containing protein LWD1 [Arabidopsis ... 79 1e-15 >gb|AEL98901.1| WD repeat-containing protein LWD1, partial [Silene latifolia] gi|343172396|gb|AEL98902.1| WD repeat-containing protein LWD1, partial [Silene latifolia] Length = 338 Score = 80.1 bits (196), Expect(2) = 3e-16 Identities = 35/48 (72%), Positives = 42/48 (87%) Frame = +1 Query: 67 DVAWGGAAIFTSVSADGSVRRFDLRDKEHSQIIYETADPNPPLMRLEW 210 D+AWGGA +F SVSADGSVR FDLRDKEHS IIYE+++P+ PL+RL W Sbjct: 175 DIAWGGAGVFASVSADGSVRVFDLRDKEHSTIIYESSEPDTPLVRLGW 222 Score = 29.6 bits (65), Expect(2) = 3e-16 Identities = 15/33 (45%), Positives = 19/33 (57%), Gaps = 9/33 (27%) Frame = +2 Query: 2 LKRAFDGHQGS---------DWNEADPRRIATS 73 LK +G++ S DWNEA+PRRI TS Sbjct: 114 LKTTLNGNKNSEYCGPLTSFDWNEAEPRRIGTS 146 >ref|XP_003624554.1| WD repeat protein [Medicago truncatula] gi|355499569|gb|AES80772.1| WD repeat protein [Medicago truncatula] Length = 513 Score = 78.6 bits (192), Expect(2) = 1e-15 Identities = 34/48 (70%), Positives = 41/48 (85%) Frame = +1 Query: 67 DVAWGGAAIFTSVSADGSVRRFDLRDKEHSQIIYETADPNPPLMRLEW 210 D+AWGG +F SVSADGSVR FDLRDKEHS IIYE+++P+ PL+RL W Sbjct: 189 DIAWGGVGVFASVSADGSVRVFDLRDKEHSTIIYESSEPDTPLVRLGW 236 Score = 29.3 bits (64), Expect(2) = 1e-15 Identities = 11/13 (84%), Positives = 12/13 (92%) Frame = +2 Query: 35 DWNEADPRRIATS 73 DWNEA+PRRI TS Sbjct: 148 DWNEAEPRRIGTS 160 >gb|AFK49516.1| unknown [Medicago truncatula] Length = 352 Score = 78.6 bits (192), Expect(2) = 1e-15 Identities = 34/48 (70%), Positives = 41/48 (85%) Frame = +1 Query: 67 DVAWGGAAIFTSVSADGSVRRFDLRDKEHSQIIYETADPNPPLMRLEW 210 D+AWGG +F SVSADGSVR FDLRDKEHS IIYE+++P+ PL+RL W Sbjct: 189 DIAWGGVGVFASVSADGSVRVFDLRDKEHSTIIYESSEPDTPLVRLGW 236 Score = 29.3 bits (64), Expect(2) = 1e-15 Identities = 11/13 (84%), Positives = 12/13 (92%) Frame = +2 Query: 35 DWNEADPRRIATS 73 DWNEA+PRRI TS Sbjct: 148 DWNEAEPRRIGTS 160 >gb|AAC18912.1| ATAN11 [Arabidopsis thaliana] Length = 346 Score = 78.6 bits (192), Expect(2) = 1e-15 Identities = 34/48 (70%), Positives = 41/48 (85%) Frame = +1 Query: 67 DVAWGGAAIFTSVSADGSVRRFDLRDKEHSQIIYETADPNPPLMRLEW 210 D+AWGG +F SVSADGSVR FDLRDKEHS IIYE+++P+ PL+RL W Sbjct: 183 DIAWGGVGVFASVSADGSVRVFDLRDKEHSTIIYESSEPDTPLVRLGW 230 Score = 29.3 bits (64), Expect(2) = 1e-15 Identities = 11/13 (84%), Positives = 12/13 (92%) Frame = +2 Query: 35 DWNEADPRRIATS 73 DWNEA+PRRI TS Sbjct: 142 DWNEAEPRRIGTS 154 >ref|NP_172751.1| WD repeat-containing protein LWD1 [Arabidopsis thaliana] gi|75335308|sp|Q9LPV9.1|LWD1_ARATH RecName: Full=WD repeat-containing protein LWD1; AltName: Full=Protein ANTHOCYANIN 11-A; Short=AtAN11-A; AltName: Full=Protein LIGHT-REGULATED WD1; AltName: Full=WD repeat-containing protein AN11-A gi|8698737|gb|AAF78495.1|AC012187_15 Identical to WD repeat protein ATAN11 from Arabidopsis thaliana gb|U94746 and contains multiple WD domain PF|00400 repeats. ESTs gb|H35958, gb|AA712360, gb|R90717, gb|AW004301 come from this gene [Arabidopsis thaliana] gi|20260404|gb|AAM13100.1| WD repeat protein ATAN11 [Arabidopsis thaliana] gi|22136196|gb|AAM91176.1| WD repeat protein ATAN11 [Arabidopsis thaliana] gi|332190827|gb|AEE28948.1| WD repeat-containing protein LWD1 [Arabidopsis thaliana] Length = 346 Score = 78.6 bits (192), Expect(2) = 1e-15 Identities = 34/48 (70%), Positives = 41/48 (85%) Frame = +1 Query: 67 DVAWGGAAIFTSVSADGSVRRFDLRDKEHSQIIYETADPNPPLMRLEW 210 D+AWGG +F SVSADGSVR FDLRDKEHS IIYE+++P+ PL+RL W Sbjct: 183 DIAWGGVGVFASVSADGSVRVFDLRDKEHSTIIYESSEPDTPLVRLGW 230 Score = 29.3 bits (64), Expect(2) = 1e-15 Identities = 11/13 (84%), Positives = 12/13 (92%) Frame = +2 Query: 35 DWNEADPRRIATS 73 DWNEA+PRRI TS Sbjct: 142 DWNEAEPRRIGTS 154