BLASTX nr result

ID: Scutellaria23_contig00023534 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00023534
         (1443 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267134.1| PREDICTED: E3 ubiquitin-protein ligase RING1...   271   4e-70
emb|CAN79596.1| hypothetical protein VITISV_042386 [Vitis vinifera]   271   4e-70
ref|XP_002329726.1| predicted protein [Populus trichocarpa] gi|1...   261   3e-67
ref|XP_002317728.1| predicted protein [Populus trichocarpa] gi|2...   252   1e-64
gb|ACT21194.1| zinc finger protein [Carica papaya]                    251   3e-64

>ref|XP_002267134.1| PREDICTED: E3 ubiquitin-protein ligase RING1 isoform 1 [Vitis
            vinifera] gi|359491811|ref|XP_003634328.1| PREDICTED: E3
            ubiquitin-protein ligase RING1 isoform 2 [Vitis vinifera]
          Length = 369

 Score =  271 bits (692), Expect = 4e-70
 Identities = 138/238 (57%), Positives = 155/238 (65%), Gaps = 4/238 (1%)
 Frame = +2

Query: 383  DLSALFGPRSPNEFDPFTFLNSYINNLQTRGANIQLVFESPXXXXXXXXXVDFRLPANFG 562
            D   LFG   P+ F PF FL +Y+  L+  G N+Q V +             FRL  N G
Sbjct: 112  DFPGLFGA-DPDAFHPFAFLQNYLQTLRAGGTNVQFVIDGNSPEGT------FRLSPNLG 164

Query: 563  DYFIGPGLEQLIQQLAENDPNRYGTPPASKSAVEALPDIKISSEMLASDSSQCAVCKDSF 742
            DYFIGPGLEQLIQQLAENDPNRYGTPPASKSA+E LP I+I+ E+L +DSSQCAVCKDSF
Sbjct: 165  DYFIGPGLEQLIQQLAENDPNRYGTPPASKSAIEGLPTIRITVELLGTDSSQCAVCKDSF 224

Query: 743  ELDEEAKQLPCKHIYHKDCILPWLELHNSCPVCRFELPTDDPDYESRRTG----QTXXXX 910
            ELDEEAKQ+PCKHIYH DCILPWLELHNSCPVCR+ELPTDDPDYE R  G    QT    
Sbjct: 225  ELDEEAKQMPCKHIYHNDCILPWLELHNSCPVCRYELPTDDPDYEHRTRGGQVNQTGGNA 284

Query: 911  XXXXXXXXXXXXXXXXXXXRDSNNNNNIARTPRTIERMLRIPFPWLIRGLGSPAETSD 1084
                                  +  N   +TPRT +RM RI FPW  R  GSPAETS+
Sbjct: 285  AAVAAAGAASNSASGAAGGAAVSGENPNPQTPRTADRMFRISFPWPFRTFGSPAETSN 342



 Score = 58.2 bits (139), Expect = 5e-06
 Identities = 25/45 (55%), Positives = 34/45 (75%)
 Frame = +1

Query: 7   GGNAAAQQYFCYECNRHVNIVPPSSPTAELFCPNCHGGFLEESDS 141
           GG+AA Q YFCY+CN  V+I P  SPT++  CP+C+ GFLEE ++
Sbjct: 17  GGSAAPQSYFCYQCNLTVSITP--SPTSDPLCPHCNDGFLEEVEN 59


>emb|CAN79596.1| hypothetical protein VITISV_042386 [Vitis vinifera]
          Length = 371

 Score =  271 bits (692), Expect = 4e-70
 Identities = 138/238 (57%), Positives = 155/238 (65%), Gaps = 4/238 (1%)
 Frame = +2

Query: 383  DLSALFGPRSPNEFDPFTFLNSYINNLQTRGANIQLVFESPXXXXXXXXXVDFRLPANFG 562
            D   LFG   P+ F PF FL +Y+  L+  G N+Q V +             FRL  N G
Sbjct: 114  DFPGLFGA-DPDAFHPFAFLQNYLQTLRAGGTNVQFVIDGNSPEGT------FRLSPNLG 166

Query: 563  DYFIGPGLEQLIQQLAENDPNRYGTPPASKSAVEALPDIKISSEMLASDSSQCAVCKDSF 742
            DYFIGPGLEQLIQQLAENDPNRYGTPPASKSA+E LP I+I+ E+L +DSSQCAVCKDSF
Sbjct: 167  DYFIGPGLEQLIQQLAENDPNRYGTPPASKSAIEGLPTIRITVELLGTDSSQCAVCKDSF 226

Query: 743  ELDEEAKQLPCKHIYHKDCILPWLELHNSCPVCRFELPTDDPDYESRRTG----QTXXXX 910
            ELDEEAKQ+PCKHIYH DCILPWLELHNSCPVCR+ELPTDDPDYE R  G    QT    
Sbjct: 227  ELDEEAKQMPCKHIYHNDCILPWLELHNSCPVCRYELPTDDPDYEHRTRGGQVNQTGGNA 286

Query: 911  XXXXXXXXXXXXXXXXXXXRDSNNNNNIARTPRTIERMLRIPFPWLIRGLGSPAETSD 1084
                                  +  N   +TPRT +RM RI FPW  R  GSPAETS+
Sbjct: 287  AAVAAAGAASNSASGAAGGAAVSGENPNPQTPRTADRMFRISFPWPFRTFGSPAETSN 344



 Score = 58.2 bits (139), Expect = 5e-06
 Identities = 25/45 (55%), Positives = 34/45 (75%)
 Frame = +1

Query: 7   GGNAAAQQYFCYECNRHVNIVPPSSPTAELFCPNCHGGFLEESDS 141
           GG+AA Q YFCY+CN  V+I P  SPT++  CP+C+ GFLEE ++
Sbjct: 19  GGSAAPQSYFCYQCNLTVSITP--SPTSDPLCPHCNDGFLEEVEN 61


>ref|XP_002329726.1| predicted protein [Populus trichocarpa] gi|118486397|gb|ABK95038.1|
            unknown [Populus trichocarpa] gi|222870634|gb|EEF07765.1|
            predicted protein [Populus trichocarpa]
          Length = 345

 Score =  261 bits (667), Expect = 3e-67
 Identities = 138/259 (53%), Positives = 163/259 (62%), Gaps = 5/259 (1%)
 Frame = +2

Query: 407  RSPNEFDPFTFLNSYINNLQTRGANIQLVFESPXXXXXXXXXVDFRLPANFGDYFIGPGL 586
            + P+ F+PF FL +Y+  ++  GANIQ V E+            FR+PAN GDYFIGPGL
Sbjct: 97   QDPDGFNPFVFLQNYLQTMRAGGANIQFVIEN-NPGMGGMDPTGFRVPANLGDYFIGPGL 155

Query: 587  EQLIQQLAENDPNRYGTPPASKSAVEALPDIKISSEMLASDSSQCAVCKDSFELDEEAKQ 766
            EQLIQQLAENDPNRYGTPPA+KSAVE LPD+K++ E++ SDSSQCAVCKDSFEL E AKQ
Sbjct: 156  EQLIQQLAENDPNRYGTPPAAKSAVENLPDVKVTEELMQSDSSQCAVCKDSFELGEVAKQ 215

Query: 767  LPCKHIYHKDCILPWLELHNSCPVCRFELPTDDPDYESRRTGQTXXXXXXXXXXXXXXXX 946
            +PCKHIYHKDCI+PWLELHNSCPVCR+ELPTDD DYE R+   +                
Sbjct: 216  IPCKHIYHKDCIMPWLELHNSCPVCRYELPTDDQDYEQRKGNGS------NGVNQNVGGG 269

Query: 947  XXXXXXXRDSNNNNNIARTPRTIERMLRIPFPWLI-----RGLGSPAETSDXXXXXXXXX 1111
                    D +N++  A+TPR  ER  RIPFPW       R  GS AE S+         
Sbjct: 270  INSGGSISDGDNSDGNAQTPR--ERRFRIPFPWPFSSGTGRSAGSSAEASNSRSGNNNDG 327

Query: 1112 XXXXXXXXXXDQAREEDLD 1168
                      D  REEDLD
Sbjct: 328  DSRGNTNFGSD-TREEDLD 345



 Score = 57.8 bits (138), Expect = 7e-06
 Identities = 26/40 (65%), Positives = 28/40 (70%)
 Frame = +1

Query: 22  AQQYFCYECNRHVNIVPPSSPTAELFCPNCHGGFLEESDS 141
           +Q YFCY+CNR V I PP   T  L CPNCH GFLEE DS
Sbjct: 9   SQLYFCYQCNRTVTITPP---TTALSCPNCHEGFLEELDS 45


>ref|XP_002317728.1| predicted protein [Populus trichocarpa] gi|222858401|gb|EEE95948.1|
            predicted protein [Populus trichocarpa]
          Length = 323

 Score =  252 bits (644), Expect = 1e-64
 Identities = 138/261 (52%), Positives = 156/261 (59%), Gaps = 7/261 (2%)
 Frame = +2

Query: 407  RSPNEFDPFTFLNSYINNLQTRGANIQLVFESPXXXXXXXXXVDFRLPANFGDYFIGPGL 586
            + P+ F+PF FL +Y+  ++  GANIQ V E+            FRLPAN GDYFIGPGL
Sbjct: 98   QDPDGFNPFAFLQNYLQTMRAGGANIQFVIEN-NSGMGGMDTTGFRLPANLGDYFIGPGL 156

Query: 587  EQLIQQLAENDPNRYGTPPASKSAVEALPDIKISSEMLASDSSQCAVCKDSFELDEEAKQ 766
            EQLIQQLAENDPNRYGTPPASKSAVE LPDIK++ E+L SDSSQCAVCKDSFEL EEAKQ
Sbjct: 157  EQLIQQLAENDPNRYGTPPASKSAVENLPDIKVTKELLESDSSQCAVCKDSFELGEEAKQ 216

Query: 767  LPCKHIYHKDCILPWLELHNSCPVCRFELPTDDPDYESRRTGQTXXXXXXXXXXXXXXXX 946
            +PCKHIYHKDCI PWLELHNSCPVCR+ELPTDDPDYE R+                    
Sbjct: 217  IPCKHIYHKDCITPWLELHNSCPVCRYELPTDDPDYEQRK-------------------- 256

Query: 947  XXXXXXXRDSNNNNNIARTPRTIERMLRIPFPWLI-------RGLGSPAETSDXXXXXXX 1105
                        N N   TPR  +R  RI F W         R +GS A  S+       
Sbjct: 257  -----------GNGNDVVTPR--DRRFRIAFQWPFSSGSGSGRSVGSSAGASN-SGSGNN 302

Query: 1106 XXXXXXXXXXXXDQAREEDLD 1168
                         + REEDLD
Sbjct: 303  NDEDSRGNTNFGSETREEDLD 323



 Score = 58.2 bits (139), Expect = 5e-06
 Identities = 26/46 (56%), Positives = 32/46 (69%)
 Frame = +1

Query: 4   SGGNAAAQQYFCYECNRHVNIVPPSSPTAELFCPNCHGGFLEESDS 141
           +GG    Q YFCY+C+R V I P  SPT++L CPNC  GFLEE +S
Sbjct: 4   TGGVGVPQLYFCYQCDRTVTITP--SPTSDLSCPNCQEGFLEECES 47


>gb|ACT21194.1| zinc finger protein [Carica papaya]
          Length = 340

 Score =  251 bits (642), Expect = 3e-64
 Identities = 138/250 (55%), Positives = 152/250 (60%), Gaps = 14/250 (5%)
 Frame = +2

Query: 377  FDDLSALFG-----------PRSPNEFDPFTFLNSYINNLQTRGANIQLVFESPXXXXXX 523
            FDDLSA FG           P     F+PF FL +Y+  L+  GANIQ V E+       
Sbjct: 73   FDDLSAFFGGMVPPPSATARPNDTEVFNPFLFLQNYLQTLRANGANIQFVIENNSPGGSG 132

Query: 524  XXXVDFRLPA--NFGDYFIGPGLEQLIQQLAENDPNRYGTPPASKSAVEALPDIKISSEM 697
                 FRLP   N GDYF+GPGLEQLIQQLAENDPNR+GTPPASKSA+EALP IKI  EM
Sbjct: 133  PSGA-FRLPGSLNLGDYFLGPGLEQLIQQLAENDPNRHGTPPASKSAIEALPTIKIFQEM 191

Query: 698  LASDSSQCAVCKDSFELDEEAKQLPCKHIYHKDCILPWLELHNSCPVCRFELPTDDPDYE 877
              SDSSQCAVCKDSF L EEAKQ+PCKHIYH  CILPWLELHNSCPVCR+ELPTDD DYE
Sbjct: 192  PDSDSSQCAVCKDSFALAEEAKQMPCKHIYHSQCILPWLELHNSCPVCRYELPTDDADYE 251

Query: 878  SRRTGQTXXXXXXXXXXXXXXXXXXXXXXXRDSNNNNNIARTPRTIERMLRIPFPWLIR- 1054
             R                            RD+        TPR++ER  RI  PW  R 
Sbjct: 252  HRTRANRTPAQNVSGSTDAVNAVADGNAGNRDN------PETPRSVERRFRIFLPWPFRS 305

Query: 1055 GLGSPAETSD 1084
              GS AETS+
Sbjct: 306  SFGSGAETSN 315



 Score = 58.5 bits (140), Expect = 4e-06
 Identities = 22/43 (51%), Positives = 32/43 (74%)
 Frame = +1

Query: 13  NAAAQQYFCYECNRHVNIVPPSSPTAELFCPNCHGGFLEESDS 141
           +++ Q YFCY+CNR V I P   P+++L CP C+GGFLEE ++
Sbjct: 2   SSSGQPYFCYQCNRTVRISPSPCPSSDLLCPTCNGGFLEELEN 44


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