BLASTX nr result

ID: Scutellaria23_contig00023519 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00023519
         (354 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI31981.3| unnamed protein product [Vitis vinifera]              114   6e-24
ref|XP_002271313.1| PREDICTED: pentatricopeptide repeat-containi...   114   6e-24
ref|XP_004158148.1| PREDICTED: pentatricopeptide repeat-containi...    99   4e-19
ref|XP_004143729.1| PREDICTED: pentatricopeptide repeat-containi...    99   4e-19
ref|NP_174012.1| pentatricopeptide repeat-containing protein [Ar...    96   3e-18

>emb|CBI31981.3| unnamed protein product [Vitis vinifera]
          Length = 569

 Score =  114 bits (286), Expect = 6e-24
 Identities = 61/115 (53%), Positives = 80/115 (69%), Gaps = 2/115 (1%)
 Frame = -2

Query: 353 QKLRIWSTNH--NNYSTLFSHHQHENLLSLLQSCEQTFHTAQIHGLMLKTGLDRIPFPLS 180
           QK + WS +H    YST     + ++L+SLL+SC QT    Q+HG M+KTGL  +PF LS
Sbjct: 11  QKFQSWSLHHFPKYYSTA---PEDQSLISLLESCTQTSEICQVHGSMVKTGLVNVPFTLS 67

Query: 179 KFLARVCMQDIDYAASVFEQIKCPNLFMFSSMLRGYSVSDDPRQALVLFNCMRAR 15
           K LA   +QD DYAAS+F QI  PNLFMF++MLRGYS+S  P+QA V+F  +RA+
Sbjct: 68  KLLAS-SIQDTDYAASIFNQIPSPNLFMFNTMLRGYSISHHPKQAFVVFKGLRAQ 121


>ref|XP_002271313.1| PREDICTED: pentatricopeptide repeat-containing protein At1g26900,
           mitochondrial-like [Vitis vinifera]
          Length = 597

 Score =  114 bits (286), Expect = 6e-24
 Identities = 61/115 (53%), Positives = 80/115 (69%), Gaps = 2/115 (1%)
 Frame = -2

Query: 353 QKLRIWSTNH--NNYSTLFSHHQHENLLSLLQSCEQTFHTAQIHGLMLKTGLDRIPFPLS 180
           QK + WS +H    YST     + ++L+SLL+SC QT    Q+HG M+KTGL  +PF LS
Sbjct: 11  QKFQSWSLHHFPKYYSTA---PEDQSLISLLESCTQTSEICQVHGSMVKTGLVNVPFTLS 67

Query: 179 KFLARVCMQDIDYAASVFEQIKCPNLFMFSSMLRGYSVSDDPRQALVLFNCMRAR 15
           K LA   +QD DYAAS+F QI  PNLFMF++MLRGYS+S  P+QA V+F  +RA+
Sbjct: 68  KLLAS-SIQDTDYAASIFNQIPSPNLFMFNTMLRGYSISHHPKQAFVVFKGLRAQ 121


>ref|XP_004158148.1| PREDICTED: pentatricopeptide repeat-containing protein At1g26900,
           mitochondrial-like [Cucumis sativus]
          Length = 556

 Score = 99.0 bits (245), Expect = 4e-19
 Identities = 55/109 (50%), Positives = 74/109 (67%)
 Frame = -2

Query: 335 STNHNNYSTLFSHHQHENLLSLLQSCEQTFHTAQIHGLMLKTGLDRIPFPLSKFLARVCM 156
           S++ N Y  + S      LLSLL+SC  T   +QIH  M+KT LD  PF LSK LA   +
Sbjct: 15  SSSKNLYFAISS--DQAKLLSLLESCNGTSKISQIHCYMVKTALDLDPFTLSKLLASAIL 72

Query: 155 QDIDYAASVFEQIKCPNLFMFSSMLRGYSVSDDPRQALVLFNCMRARNY 9
            DI YAAS+F +I+ PNLFMF++MLRGYS S+D +QA V+FN +R +++
Sbjct: 73  -DIKYAASIFREIRNPNLFMFNTMLRGYSNSNDSKQAFVIFNDLRNQDF 120


>ref|XP_004143729.1| PREDICTED: pentatricopeptide repeat-containing protein At1g26900,
           mitochondrial-like [Cucumis sativus]
          Length = 591

 Score = 99.0 bits (245), Expect = 4e-19
 Identities = 55/109 (50%), Positives = 74/109 (67%)
 Frame = -2

Query: 335 STNHNNYSTLFSHHQHENLLSLLQSCEQTFHTAQIHGLMLKTGLDRIPFPLSKFLARVCM 156
           S++ N Y  + S      LLSLL+SC  T   +QIH  M+KT LD  PF LSK LA   +
Sbjct: 15  SSSKNLYFAISS--DQAKLLSLLESCNGTSKISQIHCYMVKTALDLDPFTLSKLLASAIL 72

Query: 155 QDIDYAASVFEQIKCPNLFMFSSMLRGYSVSDDPRQALVLFNCMRARNY 9
            DI YAAS+F +I+ PNLFMF++MLRGYS S+D +QA V+FN +R +++
Sbjct: 73  -DIKYAASIFREIRNPNLFMFNTMLRGYSNSNDSKQAFVIFNDLRNQDF 120


>ref|NP_174012.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75216976|sp|Q9ZVG8.1|PPR60_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At1g26900, mitochondrial; Flags: Precursor
           gi|4262179|gb|AAD14496.1| Hypothetical protein
           [Arabidopsis thaliana] gi|332192635|gb|AEE30756.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           thaliana]
          Length = 572

 Score = 95.9 bits (237), Expect = 3e-18
 Identities = 45/93 (48%), Positives = 67/93 (72%)
 Frame = -2

Query: 293 QHENLLSLLQSCEQTFHTAQIHGLMLKTGLDRIPFPLSKFLARVCMQDIDYAASVFEQIK 114
           Q + L++ L+SC  T   ++IHG M+KTGLD+  F +SK LA   + DI YA+S+FE + 
Sbjct: 27  QCQKLINDLRSCRDTVEVSRIHGYMVKTGLDKDDFAVSKLLAFSSVLDIRYASSIFEHVS 86

Query: 113 CPNLFMFSSMLRGYSVSDDPRQALVLFNCMRAR 15
             NLFMF++M+RGYS+SD+P +A  +FN +RA+
Sbjct: 87  NTNLFMFNTMIRGYSISDEPERAFSVFNQLRAK 119


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