BLASTX nr result

ID: Scutellaria23_contig00023518 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00023518
         (519 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002529312.1| ATBET12, putative [Ricinus communis] gi|2235...    61   1e-07
gb|ABK93173.1| unknown [Populus trichocarpa]                           59   4e-07

>ref|XP_002529312.1| ATBET12, putative [Ricinus communis] gi|223531236|gb|EEF33081.1|
           ATBET12, putative [Ricinus communis]
          Length = 110

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 34/75 (45%), Positives = 38/75 (50%), Gaps = 3/75 (4%)
 Frame = +3

Query: 180 NTAIPLLSPLVQSPTTSENP---TVEISSCSXXXXXXXXXXXXXXPVVVMQKWQHPAAPF 350
           N AIPLLSPL+ SPT  +N    T EI S                  VV +KWQHPAAP 
Sbjct: 36  NVAIPLLSPLITSPTAIDNHHLRTAEIKSREEQHRVVESEKKASASAVVFKKWQHPAAPL 95

Query: 351 SYEAAPFLPFVHIGV 395
            YE APF P   + V
Sbjct: 96  CYEPAPFAPSFFVPV 110


>gb|ABK93173.1| unknown [Populus trichocarpa]
          Length = 105

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 35/84 (41%), Positives = 43/84 (51%), Gaps = 2/84 (2%)
 Frame = +3

Query: 150 SIQICPVTER--NTAIPLLSPLVQSPTTSENPTVEISSCSXXXXXXXXXXXXXXPVVVMQ 323
           S+QI P +    N AIPLLSPL+ SPT      +++ S                  VV +
Sbjct: 27  SLQISPASSSSWNAAIPLLSPLITSPTA-----MDMKSRDDPPSPPRIQVTEGEKPVVFK 81

Query: 324 KWQHPAAPFSYEAAPFLPFVHIGV 395
           KWQHPAAPF YE APF P   + V
Sbjct: 82  KWQHPAAPFCYELAPFKPSFFVPV 105


Top