BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00023444
         (334 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAB09923.1| copia-like retrotransposable element [Arabidopsi...    86   2e-29
gb|AAD32759.1| putative retroelement pol polyprotein [Arabidopsi...    84   7e-27
gb|AAK38381.1|AC079028_5 polyprotein, putative [Arabidopsis thal...    88   3e-26
gb|AAC62132.1| copia-like retroelement pol polyprotein [Arabidop...    84   6e-26
emb|CAA37920.1| unnamed protein product [Arabidopsis thaliana]         84   2e-25

>dbj|BAB09923.1| copia-like retrotransposable element [Arabidopsis thaliana]
          Length = 1342

 Score = 85.9 bits (211), Expect(2) = 2e-29
 Identities = 40/58 (68%), Positives = 50/58 (86%)
 Frame = +2

Query: 161  GTEQIRFKARLVAKGFTQREGVDFNEVFSPVVKHSSIRLLLALVAQWNMELHQMDVKT 334
            G E  R+KARLVAKGF+QREG+D+ E+FSPVVKH SIR LL++V Q++MEL Q+DVKT
Sbjct: 881  GVEPPRYKARLVAKGFSQREGIDYQEIFSPVVKHVSIRYLLSIVVQFDMELEQLDVKT 938



 Score = 68.2 bits (165), Expect(2) = 2e-29
 Identities = 28/52 (53%), Positives = 42/52 (80%)
 Frame = +3

Query: 9   SPDKEKWIQAMNEEILSLEKNET*TLVDKPKGQKIVGCKWIFKRKVEVVGME 164
           SP+ EKW QA  EE+ S++KN+T  ++DKP+G++++GCKWIFKRK  + G+E
Sbjct: 832 SPECEKWKQATIEEMDSMKKNDTWDVIDKPEGKRVIGCKWIFKRKAGIPGVE 883


>gb|AAD32759.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1356

 Score = 84.3 bits (207), Expect(2) = 7e-27
 Identities = 38/58 (65%), Positives = 52/58 (89%)
 Frame = +2

Query: 161  GTEQIRFKARLVAKGFTQREGVDFNEVFSPVVKHSSIRLLLALVAQWNMELHQMDVKT 334
            G E+ RFKARLVAKG+ Q+EG+D++E+F+PVVKH SIR+LL++VAQ ++EL Q+DVKT
Sbjct: 895  GVEEPRFKARLVAKGYAQKEGIDYHEIFAPVVKHVSIRVLLSIVAQEDLELEQLDVKT 952



 Score = 61.2 bits (147), Expect(2) = 7e-27
 Identities = 26/48 (54%), Positives = 38/48 (79%)
 Frame = +3

Query: 21  EKWIQAMNEEILSLEKNET*TLVDKPKGQKIVGCKWIFKRKVEVVGME 164
           +KW  AM+EEI S EKN T T+V +P+ Q+I+GC+WIFK K+ ++G+E
Sbjct: 850 DKWKLAMDEEIDSQEKNNTWTIVTRPENQRIIGCRWIFKYKLGILGVE 897


>gb|AAK38381.1|AC079028_5 polyprotein, putative [Arabidopsis thaliana]
          Length = 855

 Score = 87.8 bits (216), Expect(2) = 3e-26
 Identities = 40/58 (68%), Positives = 51/58 (87%)
 Frame = +2

Query: 161 GTEQIRFKARLVAKGFTQREGVDFNEVFSPVVKHSSIRLLLALVAQWNMELHQMDVKT 334
           G E +RFKARLVAKG+TQREGVD+ E+F+PVVKH+SIR+L+++V   +MEL QMDVKT
Sbjct: 575 GVEPVRFKARLVAKGYTQREGVDYQEIFAPVVKHTSIRVLMSVVVDQDMELEQMDVKT 632



 Score = 55.5 bits (132), Expect(2) = 3e-26
 Identities = 28/52 (53%), Positives = 36/52 (69%), Gaps = 2/52 (3%)
 Frame = +3

Query: 15  DKE--KWIQAMNEEILSLEKNET*TLVDKPKGQKIVGCKWIFKRKVEVVGME 164
           DKE  KW  A +EE+ SL KN T  LVDKP  +KI+GC+W+FK K  + G+E
Sbjct: 526 DKEWLKWKNATHEEMDSLIKNGTWDLVDKPTNRKIIGCRWLFKLKSGIPGVE 577


>gb|AAC62132.1| copia-like retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1137

 Score = 84.0 bits (206), Expect(2) = 6e-26
 Identities = 39/58 (67%), Positives = 49/58 (84%)
 Frame = +2

Query: 161 GTEQIRFKARLVAKGFTQREGVDFNEVFSPVVKHSSIRLLLALVAQWNMELHQMDVKT 334
           G E+ RFKARLV KG++Q+EG+D+ E+FSPVVKH SIRLLL++V   +MEL QMDVKT
Sbjct: 692 GVEKPRFKARLVVKGYSQKEGIDYQEIFSPVVKHVSIRLLLSMVTHCDMELQQMDVKT 749



 Score = 58.5 bits (140), Expect(2) = 6e-26
 Identities = 26/50 (52%), Positives = 38/50 (76%)
 Frame = +3

Query: 15  DKEKWIQAMNEEILSLEKNET*TLVDKPKGQKIVGCKWIFKRKVEVVGME 164
           D + W++A++EEI SL KN T  LV++ + QK +GCKW+FKRK  +VG+E
Sbjct: 645 DYKMWLKAVDEEIESLLKNNTWVLVNRDQFQKPIGCKWVFKRKSGIVGVE 694


>emb|CAA37920.1| unnamed protein product [Arabidopsis thaliana]
          Length = 494

 Score = 84.3 bits (207), Expect(2) = 2e-25
 Identities = 37/58 (63%), Positives = 50/58 (86%)
 Frame = +2

Query: 161 GTEQIRFKARLVAKGFTQREGVDFNEVFSPVVKHSSIRLLLALVAQWNMELHQMDVKT 334
           G E +R+KARLVAKG+TQREGVD+ E+F+PV KH+SIR+L+++V   ++EL QMDVKT
Sbjct: 129 GVEPVRYKARLVAKGYTQREGVDYQEIFAPVAKHTSIRILMSVVVDQDLELEQMDVKT 186



 Score = 56.6 bits (135), Expect(2) = 2e-25
 Identities = 26/48 (54%), Positives = 35/48 (72%)
 Frame = +3

Query: 21  EKWIQAMNEEILSLEKNET*TLVDKPKGQKIVGCKWIFKRKVEVVGME 164
           +KW  A +EE+ SL KN T  LVDKPK +KI+GC+W+FK K  + G+E
Sbjct: 84  KKWKLATHEEMDSLIKNGTWVLVDKPKDRKIIGCRWLFKMKSGIPGVE 131