BLASTX nr result

ID: Scutellaria23_contig00023434 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00023434
         (882 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273481.2| PREDICTED: AT-rich interactive domain-contai...   122   1e-25
emb|CBI34361.3| unnamed protein product [Vitis vinifera]              116   6e-24
ref|XP_002509831.1| DNA binding protein, putative [Ricinus commu...   104   2e-20
gb|ABE66055.1| ARID/BRIGHT DNA-binding domain-containing protein...   103   5e-20
ref|NP_192879.1| ARID/BRIGHT DNA-binding , ELM2 domain and myb-l...   103   5e-20

>ref|XP_002273481.2| PREDICTED: AT-rich interactive domain-containing protein 2-like
           [Vitis vinifera]
          Length = 601

 Score =  122 bits (306), Expect = 1e-25
 Identities = 62/130 (47%), Positives = 83/130 (63%), Gaps = 4/130 (3%)
 Frame = -2

Query: 476 ERLRSLFDQVLLTFLRDKSARNCIRPIPALCSEGRPIDLFKLFWLVRKMGGYDTISKSNL 297
           ++L+ LFDQVLL F+++     C+RPIPA+  +GR +DLFKLFW+VR  GGY+ +S   L
Sbjct: 41  DKLQVLFDQVLLIFMKEVLGNECVRPIPAMLGDGRSVDLFKLFWVVRGKGGYEWVSDKGL 100

Query: 296 WGFVSEECGSSFRVIASVKLVYMKYLNELDQWLQQVFSKRVLD----DYGGFVQKLDKLS 129
           WG V+EECG    V   +KL+Y KYL++LDQWL  +     LD    + GG   KLD + 
Sbjct: 101 WGLVAEECGLDVGVKTCLKLIYFKYLDQLDQWLLGILRDGSLDKGEGECGG---KLDSVL 157

Query: 128 WELEITSRGL 99
            EL    RGL
Sbjct: 158 EELGTEFRGL 167


>emb|CBI34361.3| unnamed protein product [Vitis vinifera]
          Length = 532

 Score =  116 bits (291), Expect = 6e-24
 Identities = 50/93 (53%), Positives = 68/93 (73%)
 Frame = -2

Query: 476 ERLRSLFDQVLLTFLRDKSARNCIRPIPALCSEGRPIDLFKLFWLVRKMGGYDTISKSNL 297
           ++L+ LFDQVLL F+++     C+RPIPA+  +GR +DLFKLFW+VR  GGY+ +S   L
Sbjct: 41  DKLQVLFDQVLLIFMKEVLGNECVRPIPAMLGDGRSVDLFKLFWVVRGKGGYEWVSDKGL 100

Query: 296 WGFVSEECGSSFRVIASVKLVYMKYLNELDQWL 198
           WG V+EECG    V   +KL+Y KYL++LDQWL
Sbjct: 101 WGLVAEECGLDVGVKTCLKLIYFKYLDQLDQWL 133


>ref|XP_002509831.1| DNA binding protein, putative [Ricinus communis]
           gi|223549730|gb|EEF51218.1| DNA binding protein,
           putative [Ricinus communis]
          Length = 656

 Score =  104 bits (260), Expect = 2e-20
 Identities = 67/146 (45%), Positives = 84/146 (57%), Gaps = 5/146 (3%)
 Frame = -2

Query: 488 DSCKERLRSLFDQVLLTFLRDKSARNCIRPIPALCSEGRPIDLFKLFWLVRKMGGYDTIS 309
           D  + +LR LFDQVL  F  + +AR   RPIPAL   G+ +DLFKLF +VRK GG+D + 
Sbjct: 46  DDHEVKLRCLFDQVLSVFANEAAARGSFRPIPALLGGGKSLDLFKLFRVVRKRGGFDLV- 104

Query: 308 KSNLWGFVSEECGSSFRVIASVKLVYMKYLNELDQWLQQVFSKRVLDD----YGGFVQKL 141
            +  W FV +E G      ASVKLVY KYL EL++WL+   S R L +     GG   K 
Sbjct: 105 -NGFWSFVVKELGLDLAASASVKLVYFKYLYELERWLRGSNSSRRLGNGQCRPGG---KF 160

Query: 140 DKLSWELEITSRG-LSRDDQTNKDAK 66
           + LS ELE   R  LS   +  KD K
Sbjct: 161 NCLSMELEAEFRKLLSNGSKKGKDGK 186


>gb|ABE66055.1| ARID/BRIGHT DNA-binding domain-containing protein/ELM2
           domain-containing protein/Myb-like DNA-binding
           domain-containing protein [Arabidopsis thaliana]
          Length = 573

 Score =  103 bits (257), Expect = 5e-20
 Identities = 47/102 (46%), Positives = 72/102 (70%)
 Frame = -2

Query: 506 IEIYRFDSCKERLRSLFDQVLLTFLRDKSARNCIRPIPALCSEGRPIDLFKLFWLVRKMG 327
           +EI   D C+ERLR LFDQ LL FL ++ +   I+P+PA+  +G+ +DLFKLF LVR+  
Sbjct: 14  VEIKYVDECEERLRRLFDQALLVFLEEEGS---IKPLPAVIGDGKNVDLFKLFVLVRERE 70

Query: 326 GYDTISKSNLWGFVSEECGSSFRVIASVKLVYMKYLNELDQW 201
           G+DT+S+  LW  V+E+ G    ++ S+ L+Y+KYLN +++W
Sbjct: 71  GFDTVSRKRLWEVVAEKLGFDCSLVPSLILIYLKYLNRMEKW 112


>ref|NP_192879.1| ARID/BRIGHT DNA-binding , ELM2 domain and myb-like DNA-binding
           domain-containing protein [Arabidopsis thaliana]
           gi|75263770|sp|Q9LDD4.1|ARID2_ARATH RecName:
           Full=AT-rich interactive domain-containing protein 2;
           Short=ARID domain-containing protein 2; AltName:
           Full=ARID and ELM2 domain-containing protein 2
           gi|7267839|emb|CAB81241.1| putative protein [Arabidopsis
           thaliana] gi|7321037|emb|CAB82145.1| putative protein
           [Arabidopsis thaliana] gi|332657608|gb|AEE83008.1|
           ARID/BRIGHT DNA-binding , ELM2 domain and myb-like
           DNA-binding domain-containing protein [Arabidopsis
           thaliana]
          Length = 573

 Score =  103 bits (257), Expect = 5e-20
 Identities = 47/102 (46%), Positives = 72/102 (70%)
 Frame = -2

Query: 506 IEIYRFDSCKERLRSLFDQVLLTFLRDKSARNCIRPIPALCSEGRPIDLFKLFWLVRKMG 327
           +EI   D C+ERLR LFDQ LL FL ++ +   I+P+PA+  +G+ +DLFKLF LVR+  
Sbjct: 14  VEIKYVDECEERLRRLFDQALLVFLEEEGS---IKPLPAVIGDGKNVDLFKLFVLVRERE 70

Query: 326 GYDTISKSNLWGFVSEECGSSFRVIASVKLVYMKYLNELDQW 201
           G+DT+S+  LW  V+E+ G    ++ S+ L+Y+KYLN +++W
Sbjct: 71  GFDTVSRKRLWEVVAEKLGFDCSLVPSLILIYLKYLNRMEKW 112


Top