BLASTX nr result

ID: Scutellaria23_contig00022441 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00022441
         (1275 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276964.1| PREDICTED: peptide deformylase 1B, chloropla...   359   1e-96
ref|XP_002521451.1| polypeptide deformylase, putative [Ricinus c...   356   6e-96
ref|XP_004158319.1| PREDICTED: peptide deformylase 1B, chloropla...   336   7e-90
ref|NP_001234441.1| peptide deformylase 1B, chloroplastic [Solan...   333   4e-89
ref|XP_002300047.1| peptide deformylase [Populus trichocarpa] gi...   332   1e-88

>ref|XP_002276964.1| PREDICTED: peptide deformylase 1B, chloroplastic [Vitis vinifera]
            gi|296087647|emb|CBI34903.3| unnamed protein product
            [Vitis vinifera]
          Length = 275

 Score =  359 bits (921), Expect = 1e-96
 Identities = 184/274 (67%), Positives = 220/274 (80%), Gaps = 5/274 (1%)
 Frame = -1

Query: 1176 TCLHSAALTQTL-----GRGFLPLRSQFRHXXXXXXXXXXXSNRYKLSIRQPVFAQARRS 1012
            +CLHS+ L+ T       R  L   +   H           +NR++L + Q V  QA+R 
Sbjct: 5    SCLHSSYLSNTFLPILRHRSALSTSTSHLHRFCSPSRFFSSANRFRLPLMQ-VQVQAKRG 63

Query: 1011 FSSVAKEEGIASPSDLQFQSPLKIVEYPDPILRAKNKRVNSFDESLKKLVDEMFDVMYRT 832
            FS   KEE IASP+DL F++PLKIVEYPDPILRAKNK +++FD++LKKLVDEMFDVMY+T
Sbjct: 64   FSF--KEEVIASPADLSFEAPLKIVEYPDPILRAKNKLISTFDDNLKKLVDEMFDVMYKT 121

Query: 831  DGIGLSAPQVGINVQLMVFNPVGERGEGEEIILVNPRINRYSKKIVPFNEGCLSFPEIYA 652
            DGIGLSAPQVGINVQLMVFNPVGERGEGEEI+LVNPR+N+YSKKIV FNEGCLSFP IYA
Sbjct: 122  DGIGLSAPQVGINVQLMVFNPVGERGEGEEIVLVNPRVNKYSKKIVLFNEGCLSFPGIYA 181

Query: 651  DVERPDSLKVNAQDITGARFEVNLTGLNARVFQHEYDHLQGILFFDRMSDEVLDSIRAEL 472
            DVERP+S+K++A+DITGARF +NL+GL ARVFQHE+DHLQG LFFDRM++EVLDSI A L
Sbjct: 182  DVERPESVKIDARDITGARFMINLSGLPARVFQHEFDHLQGTLFFDRMTEEVLDSIHANL 241

Query: 471  QALEKKYEERTGLQCPEKIDARRRRKKAVGFGKS 370
            Q LE+KYE+RTG   PE+I+ R+RRK A GFGKS
Sbjct: 242  QDLERKYEDRTGFPSPERIETRKRRKVAAGFGKS 275


>ref|XP_002521451.1| polypeptide deformylase, putative [Ricinus communis]
            gi|223539350|gb|EEF40941.1| polypeptide deformylase,
            putative [Ricinus communis]
          Length = 282

 Score =  356 bits (914), Expect = 6e-96
 Identities = 174/223 (78%), Positives = 203/223 (91%)
 Frame = -1

Query: 1038 PVFAQARRSFSSVAKEEGIASPSDLQFQSPLKIVEYPDPILRAKNKRVNSFDESLKKLVD 859
            PV AQA+RSFS   KEE IA+P+DL F+ PLKIVEYPDPILR KNKR+++FD++LKKLVD
Sbjct: 62   PVRAQAKRSFSF--KEEEIATPADLCFEEPLKIVEYPDPILRRKNKRIDTFDDNLKKLVD 119

Query: 858  EMFDVMYRTDGIGLSAPQVGINVQLMVFNPVGERGEGEEIILVNPRINRYSKKIVPFNEG 679
            EMFDVMY+TDGIGLSAPQVGINVQLMVFNPVGERGEGEEI+L+NPR+N+YSKKIVPFNEG
Sbjct: 120  EMFDVMYKTDGIGLSAPQVGINVQLMVFNPVGERGEGEEIVLINPRLNKYSKKIVPFNEG 179

Query: 678  CLSFPEIYADVERPDSLKVNAQDITGARFEVNLTGLNARVFQHEYDHLQGILFFDRMSDE 499
            CLSFP IYADV RP+S+K++A+DI GARF VNL+GL ARVFQHEYDHL+GILFFDRM+DE
Sbjct: 180  CLSFPGIYADVLRPESVKIDARDINGARFTVNLSGLPARVFQHEYDHLEGILFFDRMTDE 239

Query: 498  VLDSIRAELQALEKKYEERTGLQCPEKIDARRRRKKAVGFGKS 370
            VLDSIRA+LQALEKK+E++TG   PEKI+ R+ +K A GFGKS
Sbjct: 240  VLDSIRAQLQALEKKFEDKTGYASPEKIETRKTKKAAAGFGKS 282


>ref|XP_004158319.1| PREDICTED: peptide deformylase 1B, chloroplastic-like [Cucumis
            sativus]
          Length = 273

 Score =  336 bits (862), Expect = 7e-90
 Identities = 166/222 (74%), Positives = 197/222 (88%)
 Frame = -1

Query: 1035 VFAQARRSFSSVAKEEGIASPSDLQFQSPLKIVEYPDPILRAKNKRVNSFDESLKKLVDE 856
            V+AQA+R FS  AKE+ +AS  DL+F++PLKIVEYPDPILRAKNKR+ SFD++LKKLV E
Sbjct: 55   VYAQAKRGFS--AKEDDVASSVDLEFEAPLKIVEYPDPILRAKNKRIGSFDDNLKKLVQE 112

Query: 855  MFDVMYRTDGIGLSAPQVGINVQLMVFNPVGERGEGEEIILVNPRINRYSKKIVPFNEGC 676
            MFDVMY+TDGIGLSAPQVG+NVQLMVFN VGERGEGEEI+LVNP++ RYSKK V FNEGC
Sbjct: 113  MFDVMYKTDGIGLSAPQVGVNVQLMVFNSVGERGEGEEIVLVNPKVYRYSKKTVLFNEGC 172

Query: 675  LSFPEIYADVERPDSLKVNAQDITGARFEVNLTGLNARVFQHEYDHLQGILFFDRMSDEV 496
            LSFP IYADVERP+S+K++A+DI+G RF VNL+GL+ARVFQHE+DHLQG LFFDRM+DEV
Sbjct: 173  LSFPMIYADVERPESIKIDARDISGTRFMVNLSGLSARVFQHEFDHLQGTLFFDRMTDEV 232

Query: 495  LDSIRAELQALEKKYEERTGLQCPEKIDARRRRKKAVGFGKS 370
            L++IR +LQALEKKYE+RTGL  PE+I+   RRK   GFGKS
Sbjct: 233  LETIRPQLQALEKKYEDRTGLPSPERIE-NFRRKVGAGFGKS 273


>ref|NP_001234441.1| peptide deformylase 1B, chloroplastic [Solanum lycopersicum]
            gi|17433052|sp|Q9FV54.1|DEF1B_SOLLC RecName: Full=Peptide
            deformylase 1B, chloroplastic; Short=PDF 1B; AltName:
            Full=Polypeptide deformylase; Flags: Precursor
            gi|11320950|gb|AAG33972.1| peptide deformylase-like
            protein [Solanum lycopersicum]
          Length = 279

 Score =  333 bits (855), Expect = 4e-89
 Identities = 159/222 (71%), Positives = 195/222 (87%)
 Frame = -1

Query: 1035 VFAQARRSFSSVAKEEGIASPSDLQFQSPLKIVEYPDPILRAKNKRVNSFDESLKKLVDE 856
            V+AQARR  SS  K + IA+P+DL F  PLKIVEYPDPILRAKNKR+++FD +LKKLVDE
Sbjct: 58   VYAQARRVLSSKTKGDEIATPADLSFVVPLKIVEYPDPILRAKNKRIDNFDANLKKLVDE 117

Query: 855  MFDVMYRTDGIGLSAPQVGINVQLMVFNPVGERGEGEEIILVNPRINRYSKKIVPFNEGC 676
            MFD+MY+TDGIGLSAPQVG+NVQLMVFN  GERGEGEEI+LVNPR++RYS++I+P+ EGC
Sbjct: 118  MFDIMYKTDGIGLSAPQVGMNVQLMVFNAAGERGEGEEIVLVNPRVSRYSRRIIPYEEGC 177

Query: 675  LSFPEIYADVERPDSLKVNAQDITGARFEVNLTGLNARVFQHEYDHLQGILFFDRMSDEV 496
            LSFP I+ DV+RP+S+KV+AQDI G RFE++L+ L ARVFQHE+DHLQG+LFFD+M+DEV
Sbjct: 178  LSFPMIHGDVKRPESVKVDAQDINGTRFEISLSALPARVFQHEFDHLQGVLFFDKMTDEV 237

Query: 495  LDSIRAELQALEKKYEERTGLQCPEKIDARRRRKKAVGFGKS 370
            LD+IR +L ALEKKYE+RTGL  PE I+ R+ +K AVGFGKS
Sbjct: 238  LDTIREKLVALEKKYEDRTGLPTPESINTRKIKKAAVGFGKS 279


>ref|XP_002300047.1| peptide deformylase [Populus trichocarpa] gi|222847305|gb|EEE84852.1|
            peptide deformylase [Populus trichocarpa]
          Length = 258

 Score =  332 bits (851), Expect = 1e-88
 Identities = 160/234 (68%), Positives = 199/234 (85%), Gaps = 4/234 (1%)
 Frame = -1

Query: 1062 RYKLSIRQP----VFAQARRSFSSVAKEEGIASPSDLQFQSPLKIVEYPDPILRAKNKRV 895
            R+  +++QP    +F +++       K++ +A+ SDL+F++PLKIVEYPDPILRAKNKR+
Sbjct: 25   RFSSTMKQPRPPSLFVRSQAKRGPFLKQDQVAATSDLEFEAPLKIVEYPDPILRAKNKRI 84

Query: 894  NSFDESLKKLVDEMFDVMYRTDGIGLSAPQVGINVQLMVFNPVGERGEGEEIILVNPRIN 715
            +SFD++LKKLVDEMFDVMY+TDGIGLSAPQVGINVQLMVFNP  E GEG+EI+LVNPR+N
Sbjct: 85   DSFDDNLKKLVDEMFDVMYKTDGIGLSAPQVGINVQLMVFNPADEHGEGDEIVLVNPRVN 144

Query: 714  RYSKKIVPFNEGCLSFPEIYADVERPDSLKVNAQDITGARFEVNLTGLNARVFQHEYDHL 535
            +YSKK V FNEGCLSFP IYADV+RP+S+K++A+DI GARF VNL+GL ARVFQHE+DHL
Sbjct: 145  KYSKKTVLFNEGCLSFPGIYADVKRPESVKIDARDINGARFTVNLSGLPARVFQHEFDHL 204

Query: 534  QGILFFDRMSDEVLDSIRAELQALEKKYEERTGLQCPEKIDARRRRKKAVGFGK 373
            QGILFFDRM++EVLDSIR  LQALEKKYE++TG   PE+I+  R +K A GFGK
Sbjct: 205  QGILFFDRMTEEVLDSIRPGLQALEKKYEDKTGFPSPERIETHRLKKVAAGFGK 258


Top