BLASTX nr result

ID: Scutellaria23_contig00022437 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00022437
         (585 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272060.1| PREDICTED: ABC transporter B family member 2...   120   2e-25
ref|XP_002272855.1| PREDICTED: ABC transporter B family member 2...   102   4e-20
ref|NP_177218.3| ABC transporter B family member 26 [Arabidopsis...   100   1e-19
ref|XP_003613125.1| ABC transporter B family member [Medicago tr...   100   3e-19
ref|XP_002887316.1| ATTAP1 [Arabidopsis lyrata subsp. lyrata] gi...    99   5e-19

>ref|XP_002272060.1| PREDICTED: ABC transporter B family member 26, chloroplastic-like
           [Vitis vinifera]
          Length = 705

 Score =  120 bits (300), Expect = 2e-25
 Identities = 73/176 (41%), Positives = 98/176 (55%)
 Frame = +2

Query: 56  HRHGSFNCRNVDSIPIVASKTKLKFGNSSSAQTLACSVRNTNSAHRVGNLSVSHAFEQNR 235
           HR  +FN   +  I    + TKL F   +S      +  +T  +  V   SV ++   N 
Sbjct: 23  HRKHAFN-NTIHGISRFTTNTKLPFFQCTSPPNCRLNSFSTPKSASVNGFSVHNS---NP 78

Query: 236 EDCCDRMCETLHMFKSWFEFIRDITPGGSWWNLSHLEQNIDGSPMAAKPTTVLSALSQMW 415
           E   +   E    F+    FIR I PGGSWW+LS     I    M AKP TVL AL +MW
Sbjct: 79  EGSENDQVEFPKRFRELVHFIRSIWPGGSWWSLSDHADFI----MTAKPVTVLRALQRMW 134

Query: 416 ALVADEKWILYTAFCALTVAAVSEISMPGIIAASIFSAQKGEMLVFYKKSRFLIFL 583
            LVA ++WI++ AF AL +AAVSEIS+P  + ASIFSAQ GE++VF++    L+FL
Sbjct: 135 GLVAKDRWIIFAAFSALVLAAVSEISIPHFLTASIFSAQSGEIVVFHRNVGLLVFL 190


>ref|XP_002272855.1| PREDICTED: ABC transporter B family member 26, chloroplastic [Vitis
           vinifera] gi|296087608|emb|CBI34864.3| unnamed protein
           product [Vitis vinifera]
          Length = 658

 Score =  102 bits (255), Expect = 4e-20
 Identities = 49/96 (51%), Positives = 66/96 (68%)
 Frame = +2

Query: 296 IRDITPGGSWWNLSHLEQNIDGSPMAAKPTTVLSALSQMWALVADEKWILYTAFCALTVA 475
           IR + PGGSWW LS  E+        AK   V+  L ++W LV DE+W+++ A  +LT+A
Sbjct: 55  IRSVLPGGSWWKLSEYEEE-------AKAREVMPTLRRIWVLVEDERWVIFVAVGSLTLA 107

Query: 476 AVSEISMPGIIAASIFSAQKGEMLVFYKKSRFLIFL 583
           A+SEISMP +IAAS+FSAQ GE +VFY+ S+ LI L
Sbjct: 108 ALSEISMPNLIAASVFSAQSGETMVFYRNSQLLILL 143


>ref|NP_177218.3| ABC transporter B family member 26 [Arabidopsis thaliana]
           gi|75330788|sp|Q8RY46.1|AB26B_ARATH RecName: Full=ABC
           transporter B family member 26, chloroplastic; Short=ABC
           transporter ABCB.26; Short=AtABCB26; AltName:
           Full=Antigen peptide transporter-like 1; AltName:
           Full=Transporter associated with antigen processing-like
           protein 1; Short=AtTAP1; Flags: Precursor
           gi|19335722|gb|AAL85485.1| transporter associated with
           antigen processing-like protein [Arabidopsis thaliana]
           gi|110737412|dbj|BAF00650.1| transporter associated with
           antigen processing-like protein [Arabidopsis thaliana]
           gi|332196967|gb|AEE35088.1| ABC transporter B family
           member 26 [Arabidopsis thaliana]
          Length = 700

 Score =  100 bits (250), Expect = 1e-19
 Identities = 48/98 (48%), Positives = 69/98 (70%)
 Frame = +2

Query: 290 EFIRDITPGGSWWNLSHLEQNIDGSPMAAKPTTVLSALSQMWALVADEKWILYTAFCALT 469
           +F+R I PGGSWW+ S     +DG    AKP TV  ALS+MW LVA+++W+++ AF  L 
Sbjct: 92  DFLRTILPGGSWWSFS---DEVDGR-FIAKPVTVWRALSRMWELVAEDRWVIFAAFSTLI 147

Query: 470 VAAVSEISMPGIIAASIFSAQKGEMLVFYKKSRFLIFL 583
           VAA+SEI++P  + ASIFSAQ G++ VF++  + L+ L
Sbjct: 148 VAALSEITIPHFLTASIFSAQSGDIAVFHRNVKLLVTL 185


>ref|XP_003613125.1| ABC transporter B family member [Medicago truncatula]
           gi|355514460|gb|AES96083.1| ABC transporter B family
           member [Medicago truncatula]
          Length = 712

 Score = 99.8 bits (247), Expect = 3e-19
 Identities = 64/178 (35%), Positives = 95/178 (53%), Gaps = 2/178 (1%)
 Frame = +2

Query: 56  HRHGSFNCRNVDSIPIV--ASKTKLKFGNSSSAQTLACSVRNTNSAHRVGNLSVSHAFEQ 229
           H H   +C      P++  +S  +  F  SSS + L  S   ++S + V       +   
Sbjct: 24  HHHRHRHCHQ----PLITFSSVNRHHFTLSSSKRILLSSSIKSSSINEV-------SIHN 72

Query: 230 NREDCCDRMCETLHMFKSWFEFIRDITPGGSWWNLSHLEQNIDGSPMAAKPTTVLSALSQ 409
           N E   +   E L   +    F+  I PGG+WWN S    +++ S M  +P TV  AL +
Sbjct: 73  NSESASNASDEFLDRIRKLVSFLPSIFPGGTWWNFS---DDVEVS-MFNQPVTVWYALGK 128

Query: 410 MWALVADEKWILYTAFCALTVAAVSEISMPGIIAASIFSAQKGEMLVFYKKSRFLIFL 583
           MW LVA ++W+++ AF AL +AAVSEIS+P  + ASIFSAQ G++ VF+   R LI +
Sbjct: 129 MWNLVAKDRWVIFAAFSALIIAAVSEISIPHFLTASIFSAQGGDIKVFHGNVRLLILM 186


>ref|XP_002887316.1| ATTAP1 [Arabidopsis lyrata subsp. lyrata]
           gi|297333157|gb|EFH63575.1| ATTAP1 [Arabidopsis lyrata
           subsp. lyrata]
          Length = 700

 Score = 99.0 bits (245), Expect = 5e-19
 Identities = 48/98 (48%), Positives = 68/98 (69%)
 Frame = +2

Query: 290 EFIRDITPGGSWWNLSHLEQNIDGSPMAAKPTTVLSALSQMWALVADEKWILYTAFCALT 469
           +FIR I PGGSWW+ S     +DG    AKP TV  AL++MW LVA+++W+++ AF  L 
Sbjct: 92  DFIRTILPGGSWWSFS---DEVDGR-FIAKPVTVWRALTRMWELVAEDRWVIFAAFSTLI 147

Query: 470 VAAVSEISMPGIIAASIFSAQKGEMLVFYKKSRFLIFL 583
           VAA+SEI++P  + ASIFSAQ G++ VF +  + L+ L
Sbjct: 148 VAALSEITIPHFLTASIFSAQSGDIAVFRRNVKLLVTL 185


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