BLASTX nr result

ID: Scutellaria23_contig00022318 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00022318
         (484 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284195.1| PREDICTED: F-box protein At1g78100-like [Vit...   110   1e-22
ref|XP_002513900.1| conserved hypothetical protein [Ricinus comm...    97   1e-18
ref|XP_002307387.1| predicted protein [Populus trichocarpa] gi|2...    97   1e-18
ref|NP_173641.1| F-box protein [Arabidopsis thaliana] gi|7526400...    94   1e-17
ref|XP_002890500.1| hypothetical protein ARALYDRAFT_472458 [Arab...    93   3e-17

>ref|XP_002284195.1| PREDICTED: F-box protein At1g78100-like [Vitis vinifera]
          Length = 320

 Score =  110 bits (275), Expect = 1e-22
 Identities = 61/114 (53%), Positives = 75/114 (65%)
 Frame = +3

Query: 141 NRVSDIKTLLRCRSLSKRFNSLVPQADSLLLRVDRVVXXXXXXXXXXXXXXXXXXXXXHH 320
           N V+DIKTL+RCR++SKRFNSLVPQA++L+L+VDRV+                     HH
Sbjct: 22  NSVADIKTLIRCRAVSKRFNSLVPQAETLVLKVDRVI-STDSDGSFFLSFLKSIFRSLHH 80

Query: 321 LISFSQSPQSPARLPNSPSQILRGFDAIRSLGIELPSGDLRLDKGTTIKWVARF 482
           +IS    P  P R  NSP+QILRGFD IR+L IELP GDL L+KG  +KW A F
Sbjct: 81  IISPKSLPIQP-RPHNSPTQILRGFDRIRNLEIELPGGDLCLEKGAVLKWKAEF 133


>ref|XP_002513900.1| conserved hypothetical protein [Ricinus communis]
           gi|223546986|gb|EEF48483.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 303

 Score = 97.4 bits (241), Expect = 1e-18
 Identities = 56/118 (47%), Positives = 69/118 (58%), Gaps = 4/118 (3%)
 Frame = +3

Query: 141 NRVSDIKTLLRCRSLSKRFNSLVPQADSLLLRVDRVVXXXXXXXXXXXXXXXXXXXXXHH 320
           N VS IKTL+RCRS+SKRFNSLVPQ +SLLL VDRV+                     H 
Sbjct: 17  NSVSHIKTLIRCRSVSKRFNSLVPQTESLLLTVDRVISTESDTEILLLAFLKSLLKSIHD 76

Query: 321 LISFSQSPQSPAR----LPNSPSQILRGFDAIRSLGIELPSGDLRLDKGTTIKWVARF 482
           L  F    + P +      N+P+QIL  F+ IR L IELP+GDL+L+KG  IKW A +
Sbjct: 77  L--FKPDEEKPIQNVNLTQNTPAQILSRFERIRDLEIELPAGDLKLEKGVVIKWRAEY 132


>ref|XP_002307387.1| predicted protein [Populus trichocarpa] gi|222856836|gb|EEE94383.1|
           predicted protein [Populus trichocarpa]
          Length = 312

 Score = 97.1 bits (240), Expect = 1e-18
 Identities = 54/114 (47%), Positives = 67/114 (58%)
 Frame = +3

Query: 141 NRVSDIKTLLRCRSLSKRFNSLVPQADSLLLRVDRVVXXXXXXXXXXXXXXXXXXXXXHH 320
           N +SDIK L+RCRS+SKRFNSLVPQ +SL L+VD V+                     H 
Sbjct: 21  NSISDIKALIRCRSVSKRFNSLVPQTESLSLKVDCVISPESDSDSLFTLFKSLLKSI-HD 79

Query: 321 LISFSQSPQSPARLPNSPSQILRGFDAIRSLGIELPSGDLRLDKGTTIKWVARF 482
           L      P +  +  NSP++IL  FD IR L IELP+GDL+L+KG  IKW A F
Sbjct: 80  LFKPDPKPTARNQTQNSPARILSQFDRIRDLQIELPAGDLKLEKGAVIKWRAEF 133


>ref|NP_173641.1| F-box protein [Arabidopsis thaliana]
           gi|75264008|sp|Q9LM18.1|FB303_ARATH RecName: Full=F-box
           protein At1g22220 gi|9454528|gb|AAF87851.1|AC073942_5
           Contains similarity to an unknown protein T11I11.4
           gi|6587858 from Arabidopsis thaliana BAC T11I11
           gb|AC012680. EST gb|AA395079 comes from this gene
           [Arabidopsis thaliana] gi|46931332|gb|AAT06470.1|
           At1g22220 [Arabidopsis thaliana]
           gi|51970616|dbj|BAD44000.1| unknown protein [Arabidopsis
           thaliana] gi|332192092|gb|AEE30213.1| F-box protein
           [Arabidopsis thaliana]
          Length = 314

 Score = 93.6 bits (231), Expect = 1e-17
 Identities = 52/118 (44%), Positives = 68/118 (57%), Gaps = 4/118 (3%)
 Frame = +3

Query: 141 NRVSDIKTLLRCRSLSKRFNSLVPQADSLLLRVDRVVXXXXXXXXXXXXXXXXXXXXXHH 320
           N+V D+KTLLRC SLSKRFNSLVPQ++SL LR+D  V                     + 
Sbjct: 17  NKVGDVKTLLRCSSLSKRFNSLVPQSESLTLRLDHSV-------SDSPVVTSIFRSLFNG 69

Query: 321 LISFSQSPQSPARL----PNSPSQILRGFDAIRSLGIELPSGDLRLDKGTTIKWVARF 482
           L+S    P  P  +    P+ P +IL  FD IR+L +ELP GD++L+KG  +KW A F
Sbjct: 70  LVSLLSKPAKPITITTLSPSLPFKILSRFDRIRNLDVELPGGDVKLEKGAAVKWKAEF 127


>ref|XP_002890500.1| hypothetical protein ARALYDRAFT_472458 [Arabidopsis lyrata subsp.
           lyrata] gi|297336342|gb|EFH66759.1| hypothetical protein
           ARALYDRAFT_472458 [Arabidopsis lyrata subsp. lyrata]
          Length = 317

 Score = 92.8 bits (229), Expect = 3e-17
 Identities = 53/118 (44%), Positives = 67/118 (56%), Gaps = 4/118 (3%)
 Frame = +3

Query: 141 NRVSDIKTLLRCRSLSKRFNSLVPQADSLLLRVDRVVXXXXXXXXXXXXXXXXXXXXXHH 320
           N+V D+KTLLRC SLSKRF+SLVPQ++SL+LR+D                        H 
Sbjct: 17  NKVGDVKTLLRCTSLSKRFSSLVPQSESLILRLDH-----PDSDSPFTSIFQSLFKSFHG 71

Query: 321 LISFSQSPQSP----ARLPNSPSQILRGFDAIRSLGIELPSGDLRLDKGTTIKWVARF 482
           L S    P  P    A  P+ PS+IL  FD IRSL +EL  GD++L+KG  +KW A F
Sbjct: 72  LFSLFSKPAKPIPVTALSPSLPSKILSPFDKIRSLDVELHGGDVKLEKGAAVKWKAEF 129


Top